RNA–Protein interactions for RNA: ENST00000635659.1

SMARCA2-244, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-244ENST00000635659 KCNH5Q8NCM2 988 aa9.13□□□□□ -0.95
SMARCA2-244ENST00000635659 FAM13CQ8NE31 585 aa9.13□□□□□ -0.95
SMARCA2-244ENST00000635659 KLHDC7BQ96G42 594 aa9.13□□□□□ -0.95
SMARCA2-244ENST00000635659 DHRS1Q96LJ7 313 aa9.13□□□□□ -0.95
SMARCA2-244ENST00000635659 CEP89Q96ST8 783 aa9.13□□□□□ -0.95
SMARCA2-244ENST00000635659 KIF2CQ99661 725 aa9.13□□□□□ -0.95
SMARCA2-244ENST00000635659 WDR18Q9BV38 432 aa9.13□□□□□ -0.95
SMARCA2-244ENST00000635659 CARD10Q9BWT7 1032 aa9.13□□□□□ -0.95
SMARCA2-244ENST00000635659 USP26Q9BXU7 913 aa9.13□□□□□ -0.95
SMARCA2-244ENST00000635659 CAAP1Q9H8G2 361 aa9.13□□□□□ -0.95
SMARCA2-244ENST00000635659 NCOA5Q9HCD5 579 aaKnown RBP9.13□□□□□ -0.95
SMARCA2-244ENST00000635659 GDF2Q9UK05 429 aaPredicted RBP9.13□□□□□ -0.95
SMARCA2-244ENST00000635659 HIF3AQ9Y2N7 669 aa9.13□□□□□ -0.95
SMARCA2-244ENST00000635659 LOC100289279A0A1B0GTE1 492 aa9.12□□□□□ -0.95
SMARCA2-244ENST00000635659 PLD2O14939 933 aa9.12□□□□□ -0.95
SMARCA2-244ENST00000635659 ALBP02768 609 aa9.12□□□□□ -0.95
SMARCA2-244ENST00000635659 POU3F3P20264 500 aaPredicted RBP9.12□□□□□ -0.95
SMARCA2-244ENST00000635659 POLR2BP30876 1174 aaKnown RBP9.12□□□□□ -0.95
SMARCA2-244ENST00000635659 SOX5P35711 763 aa9.12□□□□□ -0.95
SMARCA2-244ENST00000635659 CDKN1CP49918 316 aaPredicted RBP9.12□□□□□ -0.95
SMARCA2-244ENST00000635659 PMS1P54277 932 aaKnown RBP9.12□□□□□ -0.95
SMARCA2-244ENST00000635659 ERVK-24P63145 666 aa9.12□□□□□ -0.95
SMARCA2-244ENST00000635659 FNDC3BQ53EP0 1204 aaKnown RBP9.12□□□□□ -0.95
SMARCA2-244ENST00000635659 ODR4Q5SWX8 454 aa9.12□□□□□ -0.95
SMARCA2-244ENST00000635659 FOXB2Q5VYV0 432 aa9.12□□□□□ -0.95
SMARCA2-244ENST00000635659 HDGFL2Q7Z4V5 671 aaPredicted RBP9.12□□□□□ -0.95
SMARCA2-244ENST00000635659 JAMLQ86YT9 394 aa9.12□□□□□ -0.95
SMARCA2-244ENST00000635659 JDP2Q8WYK2 163 aa9.12□□□□□ -0.95
SMARCA2-244ENST00000635659 EXOC2Q96KP1 924 aa9.12□□□□□ -0.95
SMARCA2-244ENST00000635659 IER2Q9BTL4 223 aa9.12□□□□□ -0.95
SMARCA2-244ENST00000635659 FAN1Q9Y2M0 1017 aa9.12□□□□□ -0.95
SMARCA2-244ENST00000635659 THRAP3Q9Y2W1 955 aaKnown RBP9.12□□□□□ -0.95
SMARCA2-244ENST00000635659 CSADQ9Y600 493 aa9.12□□□□□ -0.95
SMARCA2-244ENST00000635659 OVOS2A0A0G2JMS6 1433 aa9.12□□□□□ -0.95
SMARCA2-244ENST00000635659 MAP2P11137 1827 aaKnown RBP9.12□□□□□ -0.95
SMARCA2-244ENST00000635659 DOT1LQ8TEK3 1739 aa9.11□□□□□ -0.95
SMARCA2-244ENST00000635659 BTAF1O14981 1849 aa9.11□□□□□ -0.95
SMARCA2-244ENST00000635659 FANCGO15287 622 aa9.11□□□□□ -0.95
SMARCA2-244ENST00000635659 LILRB5O75023 590 aa9.11□□□□□ -0.95
SMARCA2-244ENST00000635659 AOC2O75106 756 aa9.11□□□□□ -0.95
SMARCA2-244ENST00000635659 CBX2Q14781 532 aaPredicted RBP9.11□□□□□ -0.95
SMARCA2-244ENST00000635659 MAP4K3Q8IVH8 894 aa9.11□□□□□ -0.95
SMARCA2-244ENST00000635659 DHRS4Q9BTZ2 278 aa9.11□□□□□ -0.95
SMARCA2-244ENST00000635659 ARHGEF4Q9NR80 690 aa9.11□□□□□ -0.95
SMARCA2-244ENST00000635659 TERF2IPQ9NYB0 399 aa9.11□□□□□ -0.95
SMARCA2-244ENST00000635659 SUCOQ9UBS9 1254 aaKnown RBP9.11□□□□□ -0.95
SMARCA2-244ENST00000635659 TJP2Q9UDY2 1190 aa9.11□□□□□ -0.95
SMARCA2-244ENST00000635659 BCL9O00512 1426 aa9.11□□□□□ -0.95
SMARCA2-244ENST00000635659 TRAV20A0A0B4J274 112 aa9.1□□□□□ -0.95
SMARCA2-244ENST00000635659 A0A1W2PQU0 124 aa9.1□□□□□ -0.95
SMARCA2-244ENST00000635659 ANKRD34BA5PLL1 514 aa9.1□□□□□ -0.95
SMARCA2-244ENST00000635659 RGS13O14921 159 aa9.1□□□□□ -0.95
SMARCA2-244ENST00000635659 PDE8AO60658 829 aa9.1□□□□□ -0.95
SMARCA2-244ENST00000635659 NLRP12P59046 1061 aa9.1□□□□□ -0.95
SMARCA2-244ENST00000635659 EXOSC10Q01780 885 aaKnown RBP9.1□□□□□ -0.95
SMARCA2-244ENST00000635659 SV2CQ496J9 727 aa9.1□□□□□ -0.95
SMARCA2-244ENST00000635659 PPM1JQ5JR12 505 aa9.1□□□□□ -0.95
SMARCA2-244ENST00000635659 ZBTB37Q5TC79 503 aa9.1□□□□□ -0.95
SMARCA2-244ENST00000635659 MSL1Q68DK7 614 aa9.1□□□□□ -0.95
SMARCA2-244ENST00000635659 RNF180Q86T96 592 aa9.1□□□□□ -0.95
SMARCA2-244ENST00000635659 PPFIBP1Q86W92 1011 aa9.1□□□□□ -0.95
SMARCA2-244ENST00000635659 MRPL41Q8IXM3 137 aaKnown RBP9.1□□□□□ -0.95
SMARCA2-244ENST00000635659 SMARCC1Q92922 1105 aaPredicted RBP9.1□□□□□ -0.95
SMARCA2-244ENST00000635659 TMEM87BQ96K49 555 aa9.1□□□□□ -0.95
SMARCA2-244ENST00000635659 SLC6A18Q96N87 628 aa9.1□□□□□ -0.95
SMARCA2-244ENST00000635659 RUSC1Q9BVN2 902 aa9.1□□□□□ -0.95
SMARCA2-244ENST00000635659 FAM126AQ9BYI3 521 aaPredicted RBP9.1□□□□□ -0.95
SMARCA2-244ENST00000635659 MRPS23Q9Y3D9 190 aaKnown RBP9.1□□□□□ -0.95
SMARCA2-244ENST00000635659 CCDC7Q96M83 1385 aa9.1□□□□□ -0.95
SMARCA2-244ENST00000635659 PAPPAQ13219 1627 aa9.09□□□□□ -0.95
SMARCA2-244ENST00000635659 PKD1L3Q7Z443 1732 aa9.09□□□□□ -0.95
SMARCA2-244ENST00000635659 EPXP11678 715 aa9.09□□□□□ -0.95
SMARCA2-244ENST00000635659 PMLP29590 882 aa9.09□□□□□ -0.95
SMARCA2-244ENST00000635659 L1CAMP32004 1257 aa9.09□□□□□ -0.95
SMARCA2-244ENST00000635659 EVA1CP58658 441 aa9.09□□□□□ -0.95
SMARCA2-244ENST00000635659 TMF1P82094 1093 aa9.09□□□□□ -0.95
SMARCA2-244ENST00000635659 HSP90AA2PQ14568 343 aaPredicted RBP9.09□□□□□ -0.95
SMARCA2-244ENST00000635659 SETDB1Q15047 1291 aa9.09□□□□□ -0.95
SMARCA2-244ENST00000635659 SLC6A19Q695T7 634 aa9.09□□□□□ -0.95
SMARCA2-244ENST00000635659 TMEM192Q8IY95 271 aa9.09□□□□□ -0.95
SMARCA2-244ENST00000635659 PHACTR4Q8IZ21 702 aa9.09□□□□□ -0.95
SMARCA2-244ENST00000635659 IPO9Q96P70 1041 aaKnown RBP9.09□□□□□ -0.95
SMARCA2-244ENST00000635659 CDC6Q99741 560 aa9.09□□□□□ -0.95
SMARCA2-244ENST00000635659 AARSD1Q9BTE6 412 aaKnown RBP9.09□□□□□ -0.95
SMARCA2-244ENST00000635659 MRPL4Q9BYD3 311 aaKnown RBP9.09□□□□□ -0.95
SMARCA2-244ENST00000635659 SUSD2Q9UGT4 822 aa9.09□□□□□ -0.95
SMARCA2-244ENST00000635659 MCM8Q9UJA3 840 aa9.09□□□□□ -0.95
SMARCA2-244ENST00000635659 MAPRE3Q9UPY8 281 aa9.09□□□□□ -0.95
SMARCA2-244ENST00000635659 KAT6BQ8WYB5 2073 aa9.09□□□□□ -0.95
SMARCA2-244ENST00000635659 RTL1A6NKG5 1358 aa9.09□□□□□ -0.95
SMARCA2-244ENST00000635659 CASZ1Q86V15 1759 aa9.09□□□□□ -0.95
SMARCA2-244ENST00000635659 NSD3Q9BZ95 1437 aa9.08□□□□□ -0.96
SMARCA2-244ENST00000635659 TRBV23-1A0A0A0MS06 115 aa9.08□□□□□ -0.96
SMARCA2-244ENST00000635659 GSG1L2A8MUP6 293 aa9.08□□□□□ -0.96
SMARCA2-244ENST00000635659 ID3Q02535 119 aa9.08□□□□□ -0.96
SMARCA2-244ENST00000635659 CT47A1Q5JQC4 288 aaPredicted RBP9.08□□□□□ -0.96
SMARCA2-244ENST00000635659 TOM1L2Q6ZVM7 507 aa9.08□□□□□ -0.96
SMARCA2-244ENST00000635659 DDX42Q86XP3 938 aaKnown RBP eCLIP9.08□□□□□ -0.96
SMARCA2-244ENST00000635659 HID1Q8IV36 788 aa9.08□□□□□ -0.96
SMARCA2-244ENST00000635659 GALNT11Q8NCW6 608 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms