RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-223ENST00000631247 MTMR7Q9Y216 660 aa12.27□□□□□ -0.45
UBE3A-223ENST00000631247 STXBP5LQ9Y2K9 1186 aa12.27□□□□□ -0.45
UBE3A-223ENST00000631247 TACC3Q9Y6A5 838 aa12.27□□□□□ -0.45
UBE3A-223ENST00000631247 MCM3APO60318 1980 aa12.27□□□□□ -0.45
UBE3A-223ENST00000631247 CUL9Q8IWT3 2517 aa12.26□□□□□ -0.45
UBE3A-223ENST00000631247 MOXD2PA6NHM9 499 aa12.26□□□□□ -0.45
UBE3A-223ENST00000631247 ADAMTS4O75173 837 aa12.26□□□□□ -0.45
UBE3A-223ENST00000631247 DUSP11O75319 330 aaKnown RBP12.26□□□□□ -0.45
UBE3A-223ENST00000631247 C6orf222P0C671 652 aaPredicted RBP12.26□□□□□ -0.45
UBE3A-223ENST00000631247 RAG1P15918 1043 aa12.26□□□□□ -0.45
UBE3A-223ENST00000631247 MCCP23508 829 aa12.26□□□□□ -0.45
UBE3A-223ENST00000631247 CTDSPL2Q05D32 466 aa12.26□□□□□ -0.45
UBE3A-223ENST00000631247 ACVR2BQ13705 512 aa12.26□□□□□ -0.45
UBE3A-223ENST00000631247 CCDC96Q2M329 555 aa12.26□□□□□ -0.45
UBE3A-223ENST00000631247 ZNF697Q5TEC3 545 aa12.26□□□□□ -0.45
UBE3A-223ENST00000631247 MAMDC4Q6UXC1 1216 aa12.26□□□□□ -0.45
UBE3A-223ENST00000631247 GLT1D1Q96MS3 346 aa12.26□□□□□ -0.45
UBE3A-223ENST00000631247 TSEN34Q9BSV6 310 aaKnown RBP12.26□□□□□ -0.45
UBE3A-223ENST00000631247 ABHD16BQ9H3Z7 469 aa12.26□□□□□ -0.45
UBE3A-223ENST00000631247 RNF146Q9NTX7 359 aa12.26□□□□□ -0.45
UBE3A-223ENST00000631247 MTMR10Q9NXD2 777 aa12.26□□□□□ -0.45
UBE3A-223ENST00000631247 PRUNE2Q8WUY3 3088 aa12.26□□□□□ -0.45
UBE3A-223ENST00000631247 DCDC2CA8MYV0 355 aa12.25□□□□□ -0.45
UBE3A-223ENST00000631247 SNAI1O95863 264 aaPredicted RBP12.25□□□□□ -0.45
UBE3A-223ENST00000631247 ALAS1P13196 640 aa12.25□□□□□ -0.45
UBE3A-223ENST00000631247 SHHQ15465 462 aa12.25□□□□□ -0.45
UBE3A-223ENST00000631247 CCDC144BQ3MJ40 725 aa12.25□□□□□ -0.45
UBE3A-223ENST00000631247 RRP12Q5JTH9 1297 aaKnown RBP12.25□□□□□ -0.45
UBE3A-223ENST00000631247 CCDC174Q6PII3 467 aa12.25□□□□□ -0.45
UBE3A-223ENST00000631247 KCTD1Q719H9 257 aa12.25□□□□□ -0.45
UBE3A-223ENST00000631247 NOL8Q76FK4 1167 aaKnown RBP12.25□□□□□ -0.45
UBE3A-223ENST00000631247 ARMCX2Q7L311 632 aa12.25□□□□□ -0.45
UBE3A-223ENST00000631247 SH3RF1Q7Z6J0 888 aa12.25□□□□□ -0.45
UBE3A-223ENST00000631247 PCSK9Q8NBP7 692 aaKnown RBP12.25□□□□□ -0.45
UBE3A-223ENST00000631247 STAG1Q8WVM7 1258 aa12.25□□□□□ -0.45
UBE3A-223ENST00000631247 VTI1AQ96AJ9 217 aa12.25□□□□□ -0.45
UBE3A-223ENST00000631247 FAM161BQ96MY7 647 aa12.25□□□□□ -0.45
UBE3A-223ENST00000631247 TMEM39AQ9NV64 488 aa12.25□□□□□ -0.45
UBE3A-223ENST00000631247 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.25□□□□□ -0.45
UBE3A-223ENST00000631247 MROH7Q68CQ1 1323 aa12.25□□□□□ -0.45
UBE3A-223ENST00000631247 TRIM43BA6NCK2 446 aa12.24□□□□□ -0.45
UBE3A-223ENST00000631247 TRIM6-TRIM34B2RNG4 842 aa12.24□□□□□ -0.45
UBE3A-223ENST00000631247 VCANP13611 3396 aa12.24□□□□□ -0.45
UBE3A-223ENST00000631247 PDE1AP54750 535 aa12.24□□□□□ -0.45
UBE3A-223ENST00000631247 MMRN1Q13201 1228 aa12.24□□□□□ -0.45
UBE3A-223ENST00000631247 KCNA10Q16322 511 aa12.24□□□□□ -0.45
UBE3A-223ENST00000631247 TKFCQ3LXA3 575 aa12.24□□□□□ -0.45
UBE3A-223ENST00000631247 C9orf50Q5SZB4 431 aa12.24□□□□□ -0.45
UBE3A-223ENST00000631247 VPS53Q5VIR6 699 aa12.24□□□□□ -0.45
UBE3A-223ENST00000631247 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.24□□□□□ -0.45
UBE3A-223ENST00000631247 CCDC144CPQ8IYA2 1237 aa12.24□□□□□ -0.45
UBE3A-223ENST00000631247 TRIM43Q96BQ3 446 aaPredicted RBP12.24□□□□□ -0.45
UBE3A-223ENST00000631247 RNPC3Q96LT9 517 aaKnown RBP12.24□□□□□ -0.45
UBE3A-223ENST00000631247 AGBL1Q96MI9 1066 aa12.24□□□□□ -0.45
UBE3A-223ENST00000631247 SALL3Q9BXA9 1300 aa12.24□□□□□ -0.45
UBE3A-223ENST00000631247 HELLSQ9NRZ9 838 aa12.24□□□□□ -0.45
UBE3A-223ENST00000631247 RYDENQ9NUL5 291 aaKnown RBP12.24□□□□□ -0.45
UBE3A-223ENST00000631247 LRRC37A2A6NM11 1700 aa12.23□□□□□ -0.45
UBE3A-223ENST00000631247 ASB14A6NK59 587 aa12.23□□□□□ -0.45
UBE3A-223ENST00000631247 DLL1O00548 723 aa12.23□□□□□ -0.45
UBE3A-223ENST00000631247 KIAA0355O15063 1070 aa12.23□□□□□ -0.45
UBE3A-223ENST00000631247 ORC4O43929 436 aa12.23□□□□□ -0.45
UBE3A-223ENST00000631247 NMT2O60551 498 aa12.23□□□□□ -0.45
UBE3A-223ENST00000631247 CNTN2Q02246 1040 aa12.23□□□□□ -0.45
UBE3A-223ENST00000631247 FPGSQ05932 587 aa12.23□□□□□ -0.45
UBE3A-223ENST00000631247 HDAC1Q13547 482 aaPredicted RBP12.23□□□□□ -0.45
UBE3A-223ENST00000631247 MCMDC2Q4G0Z9 681 aa12.23□□□□□ -0.45
UBE3A-223ENST00000631247 GNASQ5JWF2 1037 aa12.23□□□□□ -0.45
UBE3A-223ENST00000631247 FAM109BQ6ICB4 259 aaPredicted RBP12.23□□□□□ -0.45
UBE3A-223ENST00000631247 RCSD1Q6JBY9 416 aa12.23□□□□□ -0.45
UBE3A-223ENST00000631247 KLHDC9Q8NEP7 349 aa12.23□□□□□ -0.45
UBE3A-223ENST00000631247 DCAF4Q8WV16 495 aa12.23□□□□□ -0.45
UBE3A-223ENST00000631247 TRERF1Q96PN7 1200 aa12.23□□□□□ -0.45
UBE3A-223ENST00000631247 A1CFQ9NQ94 594 aaKnown RBP12.23□□□□□ -0.45
UBE3A-223ENST00000631247 INCENPQ9NQS7 918 aa12.23□□□□□ -0.45
UBE3A-223ENST00000631247 ANAPC4Q9UJX5 808 aa12.23□□□□□ -0.45
UBE3A-223ENST00000631247 CCPG1Q9ULG6 757 aa12.23□□□□□ -0.45
UBE3A-223ENST00000631247 PRR12Q9ULL5 1215 aa12.23□□□□□ -0.45
UBE3A-223ENST00000631247 ELP1O95163 1332 aa12.22□□□□□ -0.45
UBE3A-223ENST00000631247 MYADML2A6NDP7 307 aa12.22□□□□□ -0.45
UBE3A-223ENST00000631247 FOXP2O15409 715 aa12.22□□□□□ -0.45
UBE3A-223ENST00000631247 PLA2G6O60733 806 aa12.22□□□□□ -0.45
UBE3A-223ENST00000631247 ASGR1P07306 291 aa12.22□□□□□ -0.45
UBE3A-223ENST00000631247 CST5P28325 142 aaPredicted RBP12.22□□□□□ -0.45
UBE3A-223ENST00000631247 MFAP1P55081 439 aaKnown RBP12.22□□□□□ -0.45
UBE3A-223ENST00000631247 SNAP25P60880 206 aa12.22□□□□□ -0.45
UBE3A-223ENST00000631247 ANKRD33Q7Z3H0 272 aa12.22□□□□□ -0.45
UBE3A-223ENST00000631247 FAM133AQ8N9E0 248 aa12.22□□□□□ -0.45
UBE3A-223ENST00000631247 RILPL2Q969X0 211 aa12.22□□□□□ -0.45
UBE3A-223ENST00000631247 FAM227BQ96M60 508 aa12.22□□□□□ -0.45
UBE3A-223ENST00000631247 FGD4Q96M96 766 aa12.22□□□□□ -0.45
UBE3A-223ENST00000631247 YTHDC1Q96MU7 727 aaKnown RBP12.22□□□□□ -0.45
UBE3A-223ENST00000631247 KRTAP3-3Q9BYR6 98 aa12.22□□□□□ -0.45
UBE3A-223ENST00000631247 KRTAP3-2Q9BYR7 98 aa12.22□□□□□ -0.45
UBE3A-223ENST00000631247 LNPKQ9C0E8 428 aa12.22□□□□□ -0.45
UBE3A-223ENST00000631247 IL17RBQ9NRM6 502 aa12.22□□□□□ -0.45
UBE3A-223ENST00000631247 ZNF536O15090 1300 aa12.21□□□□□ -0.45
UBE3A-223ENST00000631247 CCDC171Q6TFL3 1326 aa12.21□□□□□ -0.45
UBE3A-223ENST00000631247 A0A0D9SFI3 127 aa12.21□□□□□ -0.45
UBE3A-223ENST00000631247 A0A0U1RQG5 324 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms