RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 MYLK2Q9H1R3 596 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 RPAP3Q9H6T3 665 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-213ENST00000630925 INTS7Q9NVH2 962 aaKnown RBP5.57□□□□□ -1.52
SDCBP-213ENST00000630925 SUPT16HQ9Y5B9 1047 aaKnown RBP5.57□□□□□ -1.52
SDCBP-213ENST00000630925 LOC102724428A0A0B4J2F2 783 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 RRN3P2A6NIE6 340 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 VGLL3A8MV65 326 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 PLD2O14939 933 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 AHCYL1O43865 530 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 NEFHP12036 1026 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 HOXB3P14651 431 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-213ENST00000630925 POLR2BP30876 1174 aaKnown RBP5.57□□□□□ -1.52
SDCBP-213ENST00000630925 IL6STP40189 918 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-213ENST00000630925 STAT1P42224 750 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 RGS3P49796 1198 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 CSE1LP55060 971 aaKnown RBP5.57□□□□□ -1.52
SDCBP-213ENST00000630925 TPD52P55327 224 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-213ENST00000630925 SIK1P57059 783 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 MECOMQ03112 1051 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 MYBPC3Q14896 1274 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 PSMD6Q15008 389 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 PKN3Q6P5Z2 889 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 BNC2Q6ZN30 1099 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-213ENST00000630925 NUDT18Q6ZVK8 323 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 USP51Q70EK9 711 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 ELOA2Q8IYF1 753 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-213ENST00000630925 MYCT1Q8N699 235 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 NEK9Q8TD19 979 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 KISS1RQ969F8 398 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-213ENST00000630925 CCDC74AQ96AQ1 378 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 GSDMAQ96QA5 445 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 SPATA9Q9BWV2 254 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 SRCIN1Q9C0H9 1055 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 ZFYVE28Q9HCC9 887 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 ABCF3Q9NUQ8 709 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 SCHIP1Q9P0W5 487 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-213ENST00000630925 MAP10Q9P2G4 905 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 CGNQ9P2M7 1197 aaKnown RBP5.57□□□□□ -1.52
SDCBP-213ENST00000630925 PCSK1NQ9UHG2 260 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 PCDHB3Q9Y5E6 796 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 ALKQ9UM73 1620 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 WDR7Q9Y4E6 1490 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 ATAD2Q6PL18 1390 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 A0A1W2PRU2 124 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 B4E171 279 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 ELL2O00472 640 aaPredicted RBP5.56□□□□□ -1.52
SDCBP-213ENST00000630925 SGTAO43765 313 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 SFTPCP11686 197 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 KRT10P13645 584 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 DESP17661 470 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 RAC1P63000 192 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 PTK2Q05397 1052 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 CCDC15Q0P6D6 951 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 PPP2R5DQ14738 602 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 SEPT7Q16181 437 aaKnown RBP5.56□□□□□ -1.52
SDCBP-213ENST00000630925 FOXB2Q5VYV0 432 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 PDE12Q6L8Q7 609 aaKnown RBP5.56□□□□□ -1.52
SDCBP-213ENST00000630925 NXPE4Q6UWF7 544 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 SLFN12Q8IYM2 578 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 ZNF687Q8N1G0 1237 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 PPM1KQ8N3J5 372 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 MNS1Q8NEH6 495 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 FNIP1Q8TF40 1166 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 KCTD13Q8WZ19 329 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 CENPIQ92674 756 aaPredicted RBP5.56□□□□□ -1.52
SDCBP-213ENST00000630925 BHMTQ93088 406 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 LRGUKQ96M69 825 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 DESI2Q9BSY9 194 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 DNM3Q9UQ16 869 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 ERICH3Q5RHP9 1530 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 PIK3R4Q99570 1358 aa5.56□□□□□ -1.52
SDCBP-213ENST00000630925 A0A0B4J203 849 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 PLOD2O00469 737 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 DKC1O60832 514 aaKnown RBP eCLIP5.55□□□□□ -1.52
SDCBP-213ENST00000630925 USP2O75604 605 aaPredicted RBP5.55□□□□□ -1.52
SDCBP-213ENST00000630925 B3GALNT1O75752 331 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 ARAFP10398 606 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 XBP1P17861 261 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 ATP6V1E1P36543 226 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 NLRP12P59046 1061 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 PCBP1Q15365 356 aaKnown RBP eCLIP5.55□□□□□ -1.52
SDCBP-213ENST00000630925 SLC14A2Q15849 920 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 MEA1Q16626 185 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 TMEM240Q5SV17 173 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 FIP1L1Q6UN15 594 aaKnown RBP5.55□□□□□ -1.52
SDCBP-213ENST00000630925 B3GNT9Q6UX72 402 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 NEK10Q6ZWH5 1172 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 BTN2A1Q7KYR7 527 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 C7orf31Q8N865 590 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 NKD1Q969G9 470 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 RADILQ96JH8 1075 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 TTLL2Q9BWV7 592 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 ITM2BQ9Y287 266 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 ARHGEF40Q8TER5 1519 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 ZNF335Q9H4Z2 1342 aaPredicted RBP5.55□□□□□ -1.52
SDCBP-213ENST00000630925 LRRC10BA6NIK2 292 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 RASA4BC9J798 803 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 P4HA2O15460 535 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 MAFKO60675 156 aa5.55□□□□□ -1.52
SDCBP-213ENST00000630925 DDAH1O94760 285 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms