RNA–Protein interactions for RNA: ENST00000630813.1

CHD2-220, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2

Gene CHD2, Length 452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-220ENST00000630813 SIPA1L1O43166 1804 aa5.06□□□□□ -1.6
CHD2-220ENST00000630813 SLX4Q8IY92 1834 aa5.06□□□□□ -1.6
CHD2-220ENST00000630813 TNS1Q9HBL0 1735 aaKnown RBP5.06□□□□□ -1.6
CHD2-220ENST00000630813 CCDC196A0A1B0GTZ2 297 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 ERICH2A1L162 156 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 TSPY2A6NKD2 308 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.05□□□□□ -1.6
CHD2-220ENST00000630813 STXBP3O00186 592 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 IGSF3O75054 1194 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 APBA3O96018 575 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 MMP10P09238 476 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 SCG2P13521 617 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 CDC25BP30305 580 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 USP5P45974 858 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 WDR4P57081 412 aaKnown RBP5.05□□□□□ -1.6
CHD2-220ENST00000630813 SH3BP2P78314 561 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 ST5P78524 1137 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 CCZ1BP86790 482 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 CCZ1P86791 482 aaPredicted RBP5.05□□□□□ -1.6
CHD2-220ENST00000630813 PLCB2Q00722 1185 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 NNTQ13423 1086 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 NOLC1Q14978 699 aaKnown RBP eCLIP5.05□□□□□ -1.6
CHD2-220ENST00000630813 PPP2R5BQ15173 497 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 ZNF174Q15697 407 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 PTPN21Q16825 1174 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 RILPL1Q5EBL4 403 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 MFSD14BQ5SR56 506 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 NT5DC1Q5TFE4 455 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 ZNF385CQ66K41 422 aaPredicted RBP5.05□□□□□ -1.6
CHD2-220ENST00000630813 MSL1Q68DK7 614 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 WWC2Q6AWC2 1192 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 PTCRAQ6ISU1 281 aaPredicted RBP5.05□□□□□ -1.6
CHD2-220ENST00000630813 APOBEC3HQ6NTF7 200 aaKnown RBP5.05□□□□□ -1.6
CHD2-220ENST00000630813 KANK3Q6NY19 840 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 APTXQ7Z2E3 356 aaKnown RBP5.05□□□□□ -1.6
CHD2-220ENST00000630813 IQCA1Q86XH1 822 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 ELOA2Q8IYF1 753 aaPredicted RBP5.05□□□□□ -1.6
CHD2-220ENST00000630813 TRIM22Q8IYM9 498 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 PNMA1Q8ND90 353 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 NEDD1Q8NHV4 660 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 SPATA20Q8TB22 786 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 RASGRP4Q8TDF6 673 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 C7orf43Q8WVR3 580 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 WASF1Q92558 559 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 GPKOWQ92917 476 aaPredicted RBP eCLIP5.05□□□□□ -1.6
CHD2-220ENST00000630813 MRFAP1L1Q96HT8 127 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 PDGFDQ9GZP0 370 aaPredicted RBP5.05□□□□□ -1.6
CHD2-220ENST00000630813 TMEM60Q9H2L4 133 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 RBM28Q9NW13 759 aaKnown RBP5.05□□□□□ -1.6
CHD2-220ENST00000630813 MYH1P12882 1939 aa5.05□□□□□ -1.6
CHD2-220ENST00000630813 GREB1LQ9C091 1923 aaPredicted RBP5.05□□□□□ -1.6
CHD2-220ENST00000630813 TRIM75PA6NK02 468 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 USP27XA6NNY8 438 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 USP17L5A8MUK1 530 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 TMEM232C9JQI7 657 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 F8W031 263 aaPredicted RBP5.04□□□□□ -1.6
CHD2-220ENST00000630813 C6orf229H3BNL8 230 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 NPHP1O15259 732 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 POLR2DO15514 142 aaKnown RBP5.04□□□□□ -1.6
CHD2-220ENST00000630813 CAVIN2O95810 425 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 ADH1CP00326 375 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 PTMAP06454 111 aaKnown RBP5.04□□□□□ -1.6
CHD2-220ENST00000630813 LDHCP07864 332 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 GOLGA8HP0CJ92 632 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 CALM1P0DP23 149 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 CALM2P0DP24 149 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 CALM3P0DP25 149 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 AKR1B1P15121 316 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 TIMP2P16035 220 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 NPR1P16066 1061 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 MSNP26038 577 aaKnown RBP5.04□□□□□ -1.6
CHD2-220ENST00000630813 SHMT1P34896 483 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 KRT2P35908 639 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 MARSP56192 900 aaKnown RBP5.04□□□□□ -1.6
CHD2-220ENST00000630813 GSTO1P78417 241 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 JAG1P78504 1218 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 ATP2C1P98194 919 aaPredicted RBP5.04□□□□□ -1.6
CHD2-220ENST00000630813 NFIAQ12857 509 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 TRIM29Q14134 588 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 MORC3Q14149 939 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 RRP1BQ14684 758 aaKnown RBP5.04□□□□□ -1.6
CHD2-220ENST00000630813 TTC38Q5R3I4 469 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 CDC42EP5Q6NZY7 148 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 ARMCX5Q6P1M9 558 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 PDXDC2PQ6P474 469 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 USP17L2Q6R6M4 530 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 SH3BP5LQ7L8J4 393 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.04□□□□□ -1.6
CHD2-220ENST00000630813 SIAH1Q8IUQ4 282 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 TEX11Q8IYF3 940 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 NLGN1Q8N2Q7 840 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 GPR161Q8N6U8 529 aaKnown RBP5.04□□□□□ -1.6
CHD2-220ENST00000630813 CEP95Q96GE4 821 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 PAGE5Q96GU1 130 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 NAP1L5Q96NT1 182 aaPredicted RBP5.04□□□□□ -1.6
CHD2-220ENST00000630813 PSMG3-AS1Q96PY0 264 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 EYA3Q99504 573 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 KRTAP9-2Q9BYQ4 174 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 TRIM5Q9C035 493 aa5.04□□□□□ -1.6
CHD2-220ENST00000630813 XPO4Q9C0E2 1151 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms