RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 PARP1P09874 1014 aaKnown RBP12.98□□□□□ -0.33
DDX41-219ENST00000629036 MCM5P33992 734 aa12.98□□□□□ -0.33
DDX41-219ENST00000629036 IKQ13123 557 aaPredicted RBP12.98□□□□□ -0.33
DDX41-219ENST00000629036 KCTD2Q14681 263 aa12.98□□□□□ -0.33
DDX41-219ENST00000629036 WTAPQ15007 396 aa12.98□□□□□ -0.33
DDX41-219ENST00000629036 TKFCQ3LXA3 575 aa12.98□□□□□ -0.33
DDX41-219ENST00000629036 MAMDC4Q6UXC1 1216 aa12.98□□□□□ -0.33
DDX41-219ENST00000629036 SGMS1Q86VZ5 419 aa12.98□□□□□ -0.33
DDX41-219ENST00000629036 ZNF654Q8IZM8 581 aa12.98□□□□□ -0.33
DDX41-219ENST00000629036 TMEM87BQ96K49 555 aa12.98□□□□□ -0.33
DDX41-219ENST00000629036 DEFB118Q96PH6 123 aa12.98□□□□□ -0.33
DDX41-219ENST00000629036 LRRC2Q9BYS8 371 aa12.98□□□□□ -0.33
DDX41-219ENST00000629036 RIOX1Q9H6W3 641 aa12.98□□□□□ -0.33
DDX41-219ENST00000629036 ACAD9Q9H845 621 aa12.98□□□□□ -0.33
DDX41-219ENST00000629036 CCPG1Q9ULG6 757 aa12.98□□□□□ -0.33
DDX41-219ENST00000629036 ISY1Q9ULR0 285 aaKnown RBP12.98□□□□□ -0.33
DDX41-219ENST00000629036 SOWAHBA6NEL2 793 aa12.97□□□□□ -0.33
DDX41-219ENST00000629036 ALAS1P13196 640 aa12.97□□□□□ -0.33
DDX41-219ENST00000629036 LIFRP42702 1097 aa12.97□□□□□ -0.33
DDX41-219ENST00000629036 CNTN2Q02246 1040 aa12.97□□□□□ -0.33
DDX41-219ENST00000629036 CDC37Q16543 378 aaPredicted RBP12.97□□□□□ -0.33
DDX41-219ENST00000629036 ZNF467Q7Z7K2 595 aaPredicted RBP12.97□□□□□ -0.33
DDX41-219ENST00000629036 DPP9Q86TI2 863 aa12.97□□□□□ -0.33
DDX41-219ENST00000629036 TCEANC2Q96MN5 208 aa12.97□□□□□ -0.33
DDX41-219ENST00000629036 TRERF1Q96PN7 1200 aa12.97□□□□□ -0.33
DDX41-219ENST00000629036 PURBQ96QR8 312 aaKnown RBP12.97□□□□□ -0.33
DDX41-219ENST00000629036 MAP3K14Q99558 947 aa12.97□□□□□ -0.33
DDX41-219ENST00000629036 TINF2Q9BSI4 451 aa12.97□□□□□ -0.33
DDX41-219ENST00000629036 MYL10Q9BUA6 226 aa12.97□□□□□ -0.33
DDX41-219ENST00000629036 USP26Q9BXU7 913 aa12.97□□□□□ -0.33
DDX41-219ENST00000629036 CWC22Q9HCG8 908 aaKnown RBP12.97□□□□□ -0.33
DDX41-219ENST00000629036 HMX1Q9NP08 348 aaPredicted RBP12.97□□□□□ -0.33
DDX41-219ENST00000629036 CYP39A1Q9NYL5 469 aa12.97□□□□□ -0.33
DDX41-219ENST00000629036 FBXO40Q9UH90 709 aa12.97□□□□□ -0.33
DDX41-219ENST00000629036 OGDHLQ9ULD0 1010 aa12.97□□□□□ -0.33
DDX41-219ENST00000629036 DDX49Q9Y6V7 483 aaKnown RBP12.97□□□□□ -0.33
DDX41-219ENST00000629036 NID2Q14112 1375 aa12.96□□□□□ -0.33
DDX41-219ENST00000629036 SYNGAP1Q96PV0 1343 aa12.96□□□□□ -0.33
DDX41-219ENST00000629036 KLRF2D3W0D1 207 aa12.96□□□□□ -0.33
DDX41-219ENST00000629036 ADCY6O43306 1168 aa12.96□□□□□ -0.33
DDX41-219ENST00000629036 DDAH1O94760 285 aa12.96□□□□□ -0.33
DDX41-219ENST00000629036 SNAI1O95863 264 aaPredicted RBP12.96□□□□□ -0.33
DDX41-219ENST00000629036 ZNF865P0CJ78 1059 aaPredicted RBP12.96□□□□□ -0.33
DDX41-219ENST00000629036 CPA1P15085 419 aa12.96□□□□□ -0.33
DDX41-219ENST00000629036 GHRHRQ02643 423 aa12.96□□□□□ -0.33
DDX41-219ENST00000629036 QRICH1Q2TAL8 776 aa12.96□□□□□ -0.33
DDX41-219ENST00000629036 RNF20Q5VTR2 975 aa12.96□□□□□ -0.33
DDX41-219ENST00000629036 SLC30A10Q6XR72 485 aa12.96□□□□□ -0.33
DDX41-219ENST00000629036 MORC4Q8TE76 937 aa12.96□□□□□ -0.33
DDX41-219ENST00000629036 NEK1Q96PY6 1258 aa12.96□□□□□ -0.33
DDX41-219ENST00000629036 AGXT2Q9BYV1 514 aa12.96□□□□□ -0.33
DDX41-219ENST00000629036 STXBP5LQ9Y2K9 1186 aa12.96□□□□□ -0.33
DDX41-219ENST00000629036 LAMA2P24043 3122 aaKnown RBP12.96□□□□□ -0.34
DDX41-219ENST00000629036 EYSQ5T1H1 3165 aa12.95□□□□□ -0.34
DDX41-219ENST00000629036 DOCK5Q9H7D0 1870 aa12.95□□□□□ -0.34
DDX41-219ENST00000629036 LTBP2Q14767 1821 aa12.95□□□□□ -0.34
DDX41-219ENST00000629036 PFASO15067 1338 aa12.95□□□□□ -0.34
DDX41-219ENST00000629036 VCANP13611 3396 aa12.95□□□□□ -0.34
DDX41-219ENST00000629036 REC8O95072 547 aa12.95□□□□□ -0.34
DDX41-219ENST00000629036 SART3Q15020 963 aaKnown RBP12.95□□□□□ -0.34
DDX41-219ENST00000629036 PRAMEF19Q5SWL8 479 aa12.95□□□□□ -0.34
DDX41-219ENST00000629036 MFSD14CQ5VZR4 134 aa12.95□□□□□ -0.34
DDX41-219ENST00000629036 APOA5Q6Q788 366 aa12.95□□□□□ -0.34
DDX41-219ENST00000629036 DHX32Q7L7V1 743 aaKnown RBP12.95□□□□□ -0.34
DDX41-219ENST00000629036 FBXL16Q8N461 479 aa12.95□□□□□ -0.34
DDX41-219ENST00000629036 MSL3Q8N5Y2 521 aaKnown RBP12.95□□□□□ -0.34
DDX41-219ENST00000629036 DIS3LQ8TF46 1054 aaKnown RBP12.95□□□□□ -0.34
DDX41-219ENST00000629036 IL17RAQ96F46 866 aa12.95□□□□□ -0.34
DDX41-219ENST00000629036 BRPF3Q9ULD4 1205 aa12.95□□□□□ -0.34
DDX41-219ENST00000629036 MYH7BA7E2Y1 1941 aa12.94□□□□□ -0.34
DDX41-219ENST00000629036 PLEKHA8P1O95397 391 aa12.94□□□□□ -0.34
DDX41-219ENST00000629036 COL6A1P12109 1028 aa12.94□□□□□ -0.34
DDX41-219ENST00000629036 RXRAP19793 462 aa12.94□□□□□ -0.34
DDX41-219ENST00000629036 SLC4A3P48751 1232 aa12.94□□□□□ -0.34
DDX41-219ENST00000629036 FUT2Q10981 343 aa12.94□□□□□ -0.34
DDX41-219ENST00000629036 ANKRD35Q8N283 1001 aa12.94□□□□□ -0.34
DDX41-219ENST00000629036 TBC1D5Q92609 795 aa12.94□□□□□ -0.34
DDX41-219ENST00000629036 SPZ1Q9BXG8 430 aa12.94□□□□□ -0.34
DDX41-219ENST00000629036 FAM217BQ9NTX9 383 aaPredicted RBP12.94□□□□□ -0.34
DDX41-219ENST00000629036 COL20A1Q9P218 1284 aa12.94□□□□□ -0.34
DDX41-219ENST00000629036 DDX20Q9UHI6 824 aaKnown RBP12.94□□□□□ -0.34
DDX41-219ENST00000629036 NRBP1Q9UHY1 535 aa12.94□□□□□ -0.34
DDX41-219ENST00000629036 CTDP1Q9Y5B0 961 aaPredicted RBP12.94□□□□□ -0.34
DDX41-219ENST00000629036 ERICH2A1L162 156 aa12.93□□□□□ -0.34
DDX41-219ENST00000629036 SEPT4O43236 478 aa12.93□□□□□ -0.34
DDX41-219ENST00000629036 SEC24BO95487 1268 aa12.93□□□□□ -0.34
DDX41-219ENST00000629036 TFRCP02786 760 aaKnown RBP12.93□□□□□ -0.34
DDX41-219ENST00000629036 EDNRBP24530 442 aa12.93□□□□□ -0.34
DDX41-219ENST00000629036 BAATQ14032 418 aaPredicted RBP12.93□□□□□ -0.34
DDX41-219ENST00000629036 KRT32Q14532 448 aa12.93□□□□□ -0.34
DDX41-219ENST00000629036 USH1GQ495M9 461 aa12.93□□□□□ -0.34
DDX41-219ENST00000629036 ARMCX2Q7L311 632 aa12.93□□□□□ -0.34
DDX41-219ENST00000629036 CATIPQ7Z7H3 387 aa12.93□□□□□ -0.34
DDX41-219ENST00000629036 RAB11FIP4Q86YS3 637 aa12.93□□□□□ -0.34
DDX41-219ENST00000629036 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.93□□□□□ -0.34
DDX41-219ENST00000629036 C7orf61Q8IZ16 206 aa12.93□□□□□ -0.34
DDX41-219ENST00000629036 SRBD1Q8N5C6 995 aaKnown RBP12.93□□□□□ -0.34
DDX41-219ENST00000629036 LENG1Q96BZ8 264 aaPredicted RBP12.93□□□□□ -0.34
DDX41-219ENST00000629036 PIGSQ96S52 555 aa12.93□□□□□ -0.34
DDX41-219ENST00000629036 MTMR10Q9NXD2 777 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms