RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 TRIM22Q8IYM9 498 aa21.78■■□□□ 1.08
MECP2-216ENST00000627864 COA7Q96BR5 231 aa21.78■■□□□ 1.08
MECP2-216ENST00000627864 RNF26Q9BY78 433 aaPredicted RBP21.78■■□□□ 1.08
MECP2-216ENST00000627864 RNF146Q9NTX7 359 aa21.78■■□□□ 1.08
MECP2-216ENST00000627864 TNPO2O14787 897 aaKnown RBP21.77■■□□□ 1.08
MECP2-216ENST00000627864 CTDNEP1O95476 244 aa21.77■■□□□ 1.08
MECP2-216ENST00000627864 TRAF1Q13077 416 aa21.77■■□□□ 1.08
MECP2-216ENST00000627864 PLEKHH3Q7Z736 793 aa21.77■■□□□ 1.08
MECP2-216ENST00000627864 CHST13Q8NET6 341 aa21.77■■□□□ 1.08
MECP2-216ENST00000627864 PCDHA1Q9Y5I3 950 aa21.77■■□□□ 1.08
MECP2-216ENST00000627864 ABCB11O95342 1321 aa21.77■■□□□ 1.07
MECP2-216ENST00000627864 MUM1L1Q5H9M0 696 aa21.76■■□□□ 1.07
MECP2-216ENST00000627864 GPR142Q7Z601 462 aa21.76■■□□□ 1.07
MECP2-216ENST00000627864 SNX21Q969T3 373 aa21.76■■□□□ 1.07
MECP2-216ENST00000627864 TRIM47Q96LD4 638 aa21.76■■□□□ 1.07
MECP2-216ENST00000627864 RBM27Q9P2N5 1060 aaKnown RBP21.76■■□□□ 1.07
MECP2-216ENST00000627864 FBXO40Q9UH90 709 aa21.76■■□□□ 1.07
MECP2-216ENST00000627864 IVNS1ABPQ9Y6Y0 642 aa21.76■■□□□ 1.07
MECP2-216ENST00000627864 CAP1Q01518 475 aa21.75■■□□□ 1.07
MECP2-216ENST00000627864 ARHGEF6Q15052 776 aa21.75■■□□□ 1.07
MECP2-216ENST00000627864 HEATR3Q7Z4Q2 680 aa21.75■■□□□ 1.07
MECP2-216ENST00000627864 NSUN7Q8NE18 718 aaKnown RBP21.75■■□□□ 1.07
MECP2-216ENST00000627864 GPKOWQ92917 476 aaPredicted RBP eCLIP21.75■■□□□ 1.07
MECP2-216ENST00000627864 ACAD9Q9H845 621 aa21.75■■□□□ 1.07
MECP2-216ENST00000627864 MRPL11Q9Y3B7 192 aaKnown RBP21.75■■□□□ 1.07
MECP2-216ENST00000627864 FCER1AP12319 257 aa21.74■■□□□ 1.07
MECP2-216ENST00000627864 SCG2P13521 617 aa21.74■■□□□ 1.07
MECP2-216ENST00000627864 PKN1Q16512 942 aa21.74■■□□□ 1.07
MECP2-216ENST00000627864 PFKFB3Q16875 520 aaPredicted RBP21.74■■□□□ 1.07
MECP2-216ENST00000627864 HSCBQ8IWL3 235 aa21.74■■□□□ 1.07
MECP2-216ENST00000627864 DDX11Q96FC9 970 aa21.74■■□□□ 1.07
MECP2-216ENST00000627864 MMP19Q99542 508 aa21.74■■□□□ 1.07
MECP2-216ENST00000627864 PTPDC1A2A3K4 754 aa21.73■■□□□ 1.07
MECP2-216ENST00000627864 K7ELQ4 463 aaPredicted RBP21.73■■□□□ 1.07
MECP2-216ENST00000627864 STRNO43815 780 aa21.73■■□□□ 1.07
MECP2-216ENST00000627864 JAK2O60674 1132 aa21.73■■□□□ 1.07
MECP2-216ENST00000627864 DEXIO95424 95 aa21.73■■□□□ 1.07
MECP2-216ENST00000627864 PTPREP23469 700 aa21.73■■□□□ 1.07
MECP2-216ENST00000627864 KCTD2Q14681 263 aa21.73■■□□□ 1.07
MECP2-216ENST00000627864 WWC2Q6AWC2 1192 aa21.73■■□□□ 1.07
MECP2-216ENST00000627864 NSMFQ6X4W1 530 aa21.73■■□□□ 1.07
MECP2-216ENST00000627864 CLEC4DQ8WXI8 215 aa21.73■■□□□ 1.07
MECP2-216ENST00000627864 LLPHQ9BRT6 129 aaKnown RBP21.73■■□□□ 1.07
MECP2-216ENST00000627864 ORC3Q9UBD5 711 aaPredicted RBP21.73■■□□□ 1.07
MECP2-216ENST00000627864 LCTP09848 1927 aa21.72■■□□□ 1.07
MECP2-216ENST00000627864 SLC15A5A6NIM6 579 aa21.72■■□□□ 1.07
MECP2-216ENST00000627864 NFIBO00712 420 aa21.72■■□□□ 1.07
MECP2-216ENST00000627864 HOXD10P28358 340 aa21.72■■□□□ 1.07
MECP2-216ENST00000627864 ANKRD35Q8N283 1001 aa21.72■■□□□ 1.07
MECP2-216ENST00000627864 STK36Q9NRP7 1315 aa21.72■■□□□ 1.07
MECP2-216ENST00000627864 ZNF236Q9UL36 1845 aa21.71■■□□□ 1.07
MECP2-216ENST00000627864 FDPSP14324 419 aaKnown RBP21.71■■□□□ 1.07
MECP2-216ENST00000627864 NAPAP54920 295 aa21.71■■□□□ 1.07
MECP2-216ENST00000627864 TBC1D5Q92609 795 aa21.71■■□□□ 1.07
MECP2-216ENST00000627864 TRIM17Q9Y577 477 aa21.71■■□□□ 1.07
MECP2-216ENST00000627864 MCM3APO60318 1980 aa21.7■■□□□ 1.07
MECP2-216ENST00000627864 hCG_1984214I3L0E3 225 aa21.7■■□□□ 1.06
MECP2-216ENST00000627864 STXBP3O00186 592 aa21.7■■□□□ 1.06
MECP2-216ENST00000627864 GNRH1P01148 92 aa21.7■■□□□ 1.06
MECP2-216ENST00000627864 ADORA2AP29274 412 aa21.7■■□□□ 1.06
MECP2-216ENST00000627864 MORN1Q5T089 497 aa21.7■■□□□ 1.06
MECP2-216ENST00000627864 MCF2L2Q86YR7 1114 aa21.7■■□□□ 1.06
MECP2-216ENST00000627864 ZNF713Q8N859 430 aaPredicted RBP21.7■■□□□ 1.06
MECP2-216ENST00000627864 SMARCC2Q8TAQ2 1214 aa21.7■■□□□ 1.06
MECP2-216ENST00000627864 AIFM3Q96NN9 605 aa21.7■■□□□ 1.06
MECP2-216ENST00000627864 NUDT12Q9BQG2 462 aa21.7■■□□□ 1.06
MECP2-216ENST00000627864 A1CFQ9NQ94 594 aaKnown RBP21.7■■□□□ 1.06
MECP2-216ENST00000627864 BARHL2Q9NY43 387 aa21.7■■□□□ 1.06
MECP2-216ENST00000627864 GJD2Q9UKL4 321 aa21.7■■□□□ 1.06
MECP2-216ENST00000627864 GABRQQ9UN88 632 aa21.7■■□□□ 1.06
MECP2-216ENST00000627864 PCNTO95613 3336 aa21.69■■□□□ 1.06
MECP2-216ENST00000627864 OPLAHO14841 1288 aa21.69■■□□□ 1.06
MECP2-216ENST00000627864 CFBP00751 764 aa21.69■■□□□ 1.06
MECP2-216ENST00000627864 PGK2P07205 417 aa21.69■■□□□ 1.06
MECP2-216ENST00000627864 GRB14Q14449 540 aa21.69■■□□□ 1.06
MECP2-216ENST00000627864 RNF207Q6ZRF8 634 aa21.69■■□□□ 1.06
MECP2-216ENST00000627864 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.69■■□□□ 1.06
MECP2-216ENST00000627864 OTOP1Q7RTM1 612 aa21.69■■□□□ 1.06
MECP2-216ENST00000627864 ABRAQ8N0Z2 381 aa21.69■■□□□ 1.06
MECP2-216ENST00000627864 WASF1Q92558 559 aa21.69■■□□□ 1.06
MECP2-216ENST00000627864 SRRDQ9UH36 339 aa21.69■■□□□ 1.06
MECP2-216ENST00000627864 CALML3P27482 149 aa21.68■■□□□ 1.06
MECP2-216ENST00000627864 HMGN5P82970 282 aaKnown RBP21.68■■□□□ 1.06
MECP2-216ENST00000627864 PRKCZQ05513 592 aa21.68■■□□□ 1.06
MECP2-216ENST00000627864 MAP2K5Q13163 448 aa21.68■■□□□ 1.06
MECP2-216ENST00000627864 CUL4AQ13619 759 aa21.68■■□□□ 1.06
MECP2-216ENST00000627864 BAATQ14032 418 aaPredicted RBP21.68■■□□□ 1.06
MECP2-216ENST00000627864 TYW1BQ6NUM6 668 aa21.68■■□□□ 1.06
MECP2-216ENST00000627864 PPP1R18Q6NYC8 613 aa21.68■■□□□ 1.06
MECP2-216ENST00000627864 DPP9Q86TI2 863 aa21.68■■□□□ 1.06
MECP2-216ENST00000627864 RGS22Q8NE09 1264 aa21.68■■□□□ 1.06
MECP2-216ENST00000627864 SOCS4Q8WXH5 440 aa21.68■■□□□ 1.06
MECP2-216ENST00000627864 ALG1Q9BT22 464 aa21.68■■□□□ 1.06
MECP2-216ENST00000627864 CYP39A1Q9NYL5 469 aa21.68■■□□□ 1.06
MECP2-216ENST00000627864 VPS54Q9P1Q0 977 aa21.68■■□□□ 1.06
MECP2-216ENST00000627864 PFASO15067 1338 aa21.68■■□□□ 1.06
MECP2-216ENST00000627864 SMCO2A6NFE2 343 aa21.67■■□□□ 1.06
MECP2-216ENST00000627864 COBLO75128 1261 aa21.67■■□□□ 1.06
MECP2-216ENST00000627864 CYP2B6P20813 491 aa21.67■■□□□ 1.06
MECP2-216ENST00000627864 FLT3LGP49771 235 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms