RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 ARHGAP27Q6ZUM4 889 aa14.05□□□□□ -0.16
SCN8A-209ENST00000627620 SULF1Q8IWU6 871 aa14.05□□□□□ -0.16
SCN8A-209ENST00000627620 HESX1Q9UBX0 185 aa14.05□□□□□ -0.16
SCN8A-209ENST00000627620 ARHGAP25P42331 645 aa14.04□□□□□ -0.16
SCN8A-209ENST00000627620 BRD3Q15059 726 aa14.04□□□□□ -0.16
SCN8A-209ENST00000627620 RILPQ96NA2 401 aa14.04□□□□□ -0.16
SCN8A-209ENST00000627620 ANKFY1Q9P2R3 1169 aa14.04□□□□□ -0.16
SCN8A-209ENST00000627620 ZBTB1Q9Y2K1 713 aa14.04□□□□□ -0.16
SCN8A-209ENST00000627620 PALM3A6NDB9 673 aaPredicted RBP14.04□□□□□ -0.16
SCN8A-209ENST00000627620 VPS41P49754 854 aa14.04□□□□□ -0.16
SCN8A-209ENST00000627620 KMT5BQ4FZB7 885 aa14.04□□□□□ -0.16
SCN8A-209ENST00000627620 RASEFQ8IZ41 740 aa14.04□□□□□ -0.16
SCN8A-209ENST00000627620 HAUS4Q9H6D7 363 aa14.04□□□□□ -0.16
SCN8A-209ENST00000627620 M0R2C6 588 aa14.04□□□□□ -0.16
SCN8A-209ENST00000627620 H2AFZP0C0S5 128 aa14.04□□□□□ -0.16
SCN8A-209ENST00000627620 PPP2R5EQ16537 467 aa14.04□□□□□ -0.16
SCN8A-209ENST00000627620 GPR162Q16538 588 aa14.04□□□□□ -0.16
SCN8A-209ENST00000627620 SEPT14Q6ZU15 432 aa14.04□□□□□ -0.16
SCN8A-209ENST00000627620 H2AFVQ71UI9 128 aa14.04□□□□□ -0.16
SCN8A-209ENST00000627620 SPICE1Q8N0Z3 855 aa14.04□□□□□ -0.16
SCN8A-209ENST00000627620 CCDC17Q96LX7 622 aa14.04□□□□□ -0.16
SCN8A-209ENST00000627620 PPFIA4O75335 1185 aa14.04□□□□□ -0.16
SCN8A-209ENST00000627620 CNGA1P29973 690 aa14.04□□□□□ -0.16
SCN8A-209ENST00000627620 ODR4Q5SWX8 454 aa14.04□□□□□ -0.16
SCN8A-209ENST00000627620 SESTD1Q86VW0 696 aa14.04□□□□□ -0.16
SCN8A-209ENST00000627620 MRFAP1L1Q96HT8 127 aa14.04□□□□□ -0.16
SCN8A-209ENST00000627620 RTEL1Q9NZ71 1219 aa14.04□□□□□ -0.16
SCN8A-209ENST00000627620 ABL1P00519 1130 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 IGBP1P78318 339 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 LMNTD2Q8IXW0 634 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 BUB1BO60566 1050 aaPredicted RBP14.03□□□□□ -0.16
SCN8A-209ENST00000627620 RNF40O75150 1001 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 TMOD1P28289 359 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 PHBP35232 272 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 GPATCH4Q5T3I0 446 aaKnown RBP14.03□□□□□ -0.16
SCN8A-209ENST00000627620 FAM160B1Q5W0V3 765 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 UNC5CLQ8IV45 518 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 GPT2Q8TD30 523 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 PCDHA4Q9UN74 947 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 ASPRV1Q53RT3 343 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 APOA5Q6Q788 366 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 LRRC8AQ8IWT6 810 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 POMGNT1Q8WZA1 660 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 DPH5Q9H2P9 285 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 MAGEF1Q9HAY2 307 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 CLRN2A0PK11 232 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 FMNL1O95466 1100 aaPredicted RBP14.03□□□□□ -0.16
SCN8A-209ENST00000627620 CYP21A2P08686 494 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 COPB1P53618 953 aaKnown RBP14.03□□□□□ -0.16
SCN8A-209ENST00000627620 EXOC3L4Q17RC7 722 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 ADAT2Q7Z6V5 191 aaKnown RBP14.03□□□□□ -0.16
SCN8A-209ENST00000627620 CSRNP1Q96S65 589 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 FOXP1Q9H334 677 aaPredicted RBP14.03□□□□□ -0.16
SCN8A-209ENST00000627620 A0A1W2PQ27 194 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 A0A1W2PQ64 194 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 A0A1W2PQD8 194 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 DYNLL1P63167 89 aaKnown RBP14.03□□□□□ -0.16
SCN8A-209ENST00000627620 AOC3Q16853 763 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 LRCH2Q5VUJ6 765 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 HAUS1Q96CS2 278 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 EEF2KMTQ96G04 330 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 RNF26Q9BY78 433 aaPredicted RBP14.03□□□□□ -0.16
SCN8A-209ENST00000627620 PPP1R12CQ9BZL4 782 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 MIS12Q9H081 205 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 ZFYVE16Q7Z3T8 1539 aa14.03□□□□□ -0.16
SCN8A-209ENST00000627620 LAD1O00515 517 aa14.02□□□□□ -0.16
SCN8A-209ENST00000627620 TCP1P17987 556 aaKnown RBP14.02□□□□□ -0.16
SCN8A-209ENST00000627620 IFRD2Q12894 506 aaPredicted RBP14.02□□□□□ -0.16
SCN8A-209ENST00000627620 BIRC2Q13490 618 aa14.02□□□□□ -0.16
SCN8A-209ENST00000627620 SLC39A14Q15043 492 aa14.02□□□□□ -0.16
SCN8A-209ENST00000627620 CNOT6LQ96LI5 555 aaKnown RBP14.02□□□□□ -0.16
SCN8A-209ENST00000627620 SEC31BQ9NQW1 1179 aa14.02□□□□□ -0.16
SCN8A-209ENST00000627620 AATKQ6ZMQ8 1374 aa14.02□□□□□ -0.16
SCN8A-209ENST00000627620 UBXN2AP68543 259 aa14.02□□□□□ -0.16
SCN8A-209ENST00000627620 GABPB1Q06547 395 aaPredicted RBP14.02□□□□□ -0.16
SCN8A-209ENST00000627620 NUF2Q9BZD4 464 aa14.02□□□□□ -0.16
SCN8A-209ENST00000627620 TTLL1O95922 423 aa14.02□□□□□ -0.17
SCN8A-209ENST00000627620 POLR2BP30876 1174 aaKnown RBP14.02□□□□□ -0.17
SCN8A-209ENST00000627620 SMAP1Q8IYB5 467 aaPredicted RBP14.02□□□□□ -0.17
SCN8A-209ENST00000627620 LARP4BQ92615 738 aaKnown RBP14.02□□□□□ -0.17
SCN8A-209ENST00000627620 EPN1Q9Y6I3 576 aaPredicted RBP14.02□□□□□ -0.17
SCN8A-209ENST00000627620 ATP10DQ9P241 1426 aa14.02□□□□□ -0.17
SCN8A-209ENST00000627620 COBLO75128 1261 aa14.02□□□□□ -0.17
SCN8A-209ENST00000627620 PIK3CAP42336 1068 aa14.02□□□□□ -0.17
SCN8A-209ENST00000627620 NSFP46459 744 aaKnown RBP14.02□□□□□ -0.17
SCN8A-209ENST00000627620 TRAPPC10P48553 1259 aa14.02□□□□□ -0.17
SCN8A-209ENST00000627620 CUL4BQ13620 913 aa14.02□□□□□ -0.17
SCN8A-209ENST00000627620 KCTD1Q719H9 257 aa14.02□□□□□ -0.17
SCN8A-209ENST00000627620 PDZD4Q76G19 769 aaPredicted RBP14.02□□□□□ -0.17
SCN8A-209ENST00000627620 ZNF589Q86UQ0 364 aaPredicted RBP14.02□□□□□ -0.17
SCN8A-209ENST00000627620 CCDC13Q8IYE1 715 aa14.02□□□□□ -0.17
SCN8A-209ENST00000627620 RASGRP4Q8TDF6 673 aa14.02□□□□□ -0.17
SCN8A-209ENST00000627620 SEPT10Q9P0V9 454 aa14.02□□□□□ -0.17
SCN8A-209ENST00000627620 PCDHA5Q9Y5H7 936 aa14.02□□□□□ -0.17
SCN8A-209ENST00000627620 PPP6R2O75170 966 aa14.02□□□□□ -0.17
SCN8A-209ENST00000627620 TROVE2P10155 538 aaKnown RBP eCLIP14.02□□□□□ -0.17
SCN8A-209ENST00000627620 CARMIL3Q8ND23 1372 aa14.01□□□□□ -0.17
SCN8A-209ENST00000627620 KIF22Q14807 665 aa14.01□□□□□ -0.17
SCN8A-209ENST00000627620 FAM193BQ96PV7 902 aaPredicted RBP14.01□□□□□ -0.17
SCN8A-209ENST00000627620 GSDMAQ96QA5 445 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms