RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 OGFOD1Q8N543 542 aa22.22■■□□□ 1.15
CHRNA4-209ENST00000627000 LRRC15Q8TF66 581 aa22.22■■□□□ 1.15
CHRNA4-209ENST00000627000 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.22■■□□□ 1.15
CHRNA4-209ENST00000627000 PIM2Q9P1W9 311 aa22.22■■□□□ 1.15
CHRNA4-209ENST00000627000 ZNRF3Q9ULT6 936 aa22.22■■□□□ 1.15
CHRNA4-209ENST00000627000 GTPBP6O43824 516 aaPredicted RBP22.22■■□□□ 1.15
CHRNA4-209ENST00000627000 TDP2O95551 362 aa22.22■■□□□ 1.15
CHRNA4-209ENST00000627000 KLHL10Q6JEL2 608 aa22.22■■□□□ 1.15
CHRNA4-209ENST00000627000 CDAN1Q8IWY9 1227 aa22.22■■□□□ 1.15
CHRNA4-209ENST00000627000 RASSF8Q8NHQ8 419 aa22.22■■□□□ 1.15
CHRNA4-209ENST00000627000 CCSER1Q9C0I3 900 aa22.22■■□□□ 1.15
CHRNA4-209ENST00000627000 R3HCC1Q9Y3T6 440 aaKnown RBP22.22■■□□□ 1.15
CHRNA4-209ENST00000627000 CNTNAP1P78357 1384 aa22.22■■□□□ 1.15
CHRNA4-209ENST00000627000 TNNI2P48788 182 aa22.21■■□□□ 1.15
CHRNA4-209ENST00000627000 PTPN21Q16825 1174 aa22.21■■□□□ 1.15
CHRNA4-209ENST00000627000 RRAGBQ5VZM2 374 aa22.21■■□□□ 1.15
CHRNA4-209ENST00000627000 A0A1W2PRG0 241 aa22.21■■□□□ 1.15
CHRNA4-209ENST00000627000 SLC37A4O43826 429 aa22.21■■□□□ 1.15
CHRNA4-209ENST00000627000 NDUFB10O96000 172 aa22.21■■□□□ 1.15
CHRNA4-209ENST00000627000 TECP42680 631 aa22.21■■□□□ 1.15
CHRNA4-209ENST00000627000 CLK2P49760 499 aaKnown RBP22.21■■□□□ 1.15
CHRNA4-209ENST00000627000 STX17P56962 302 aa22.21■■□□□ 1.15
CHRNA4-209ENST00000627000 SNAP25P60880 206 aa22.21■■□□□ 1.15
CHRNA4-209ENST00000627000 VEZTQ9HBM0 779 aa22.21■■□□□ 1.15
CHRNA4-209ENST00000627000 SAMSN1Q9NSI8 373 aaKnown RBP22.21■■□□□ 1.15
CHRNA4-209ENST00000627000 PPP1R3GB7ZBB8 358 aa22.2■■□□□ 1.14
CHRNA4-209ENST00000627000 ZNF18P17022 549 aa22.2■■□□□ 1.14
CHRNA4-209ENST00000627000 ERCC5P28715 1186 aaPredicted RBP22.2■■□□□ 1.14
CHRNA4-209ENST00000627000 CXCL9Q07325 125 aa22.2■■□□□ 1.14
CHRNA4-209ENST00000627000 CDC37Q16543 378 aaPredicted RBP22.2■■□□□ 1.14
CHRNA4-209ENST00000627000 SPDYE2Q495Y8 402 aa22.2■■□□□ 1.14
CHRNA4-209ENST00000627000 FAM151AQ8WW52 585 aa22.2■■□□□ 1.14
CHRNA4-209ENST00000627000 CUL5Q93034 780 aa22.2■■□□□ 1.14
CHRNA4-209ENST00000627000 TMEM232C9JQI7 657 aa22.19■■□□□ 1.14
CHRNA4-209ENST00000627000 CABP7Q86V35 215 aa22.19■■□□□ 1.14
CHRNA4-209ENST00000627000 GMCL1P1Q8NEA9 526 aa22.19■■□□□ 1.14
CHRNA4-209ENST00000627000 IMPACTQ9P2X3 320 aa22.19■■□□□ 1.14
CHRNA4-209ENST00000627000 HERC5Q9UII4 1024 aaKnown RBP22.19■■□□□ 1.14
CHRNA4-209ENST00000627000 MYH7BA7E2Y1 1941 aa22.19■■□□□ 1.14
CHRNA4-209ENST00000627000 TXKP42681 527 aa22.19■■□□□ 1.14
CHRNA4-209ENST00000627000 DNTTIP2Q5QJE6 756 aaKnown RBP22.19■■□□□ 1.14
CHRNA4-209ENST00000627000 PSTPIP2Q9H939 334 aa22.19■■□□□ 1.14
CHRNA4-209ENST00000627000 INTS13Q9NVM9 706 aa22.19■■□□□ 1.14
CHRNA4-209ENST00000627000 SHTN1A0MZ66 631 aa22.18■■□□□ 1.14
CHRNA4-209ENST00000627000 TGFB2P61812 414 aa22.18■■□□□ 1.14
CHRNA4-209ENST00000627000 CCZ1BP86790 482 aa22.18■■□□□ 1.14
CHRNA4-209ENST00000627000 CCZ1P86791 482 aaPredicted RBP22.18■■□□□ 1.14
CHRNA4-209ENST00000627000 MTMR9Q96QG7 549 aa22.18■■□□□ 1.14
CHRNA4-209ENST00000627000 TMEM39BQ9GZU3 492 aa22.18■■□□□ 1.14
CHRNA4-209ENST00000627000 VPS33BQ9H267 617 aa22.18■■□□□ 1.14
CHRNA4-209ENST00000627000 PCDHA1Q9Y5I3 950 aa22.18■■□□□ 1.14
CHRNA4-209ENST00000627000 MYO1BO43795 1136 aa22.18■■□□□ 1.14
CHRNA4-209ENST00000627000 MRPL12P52815 198 aaKnown RBP22.18■■□□□ 1.14
CHRNA4-209ENST00000627000 CALCRLQ16602 461 aa22.18■■□□□ 1.14
CHRNA4-209ENST00000627000 AK8Q96MA6 479 aa22.18■■□□□ 1.14
CHRNA4-209ENST00000627000 USP17L15C9J2P7 530 aa22.17■■□□□ 1.14
CHRNA4-209ENST00000627000 USP17L13C9JLJ4 530 aa22.17■■□□□ 1.14
CHRNA4-209ENST00000627000 USP17L11C9JVI0 530 aa22.17■■□□□ 1.14
CHRNA4-209ENST00000627000 USP17L18D6R9N7 530 aa22.17■■□□□ 1.14
CHRNA4-209ENST00000627000 USP17L22D6RA61 530 aa22.17■■□□□ 1.14
CHRNA4-209ENST00000627000 USP17L17D6RBQ6 530 aa22.17■■□□□ 1.14
CHRNA4-209ENST00000627000 USP17L19D6RCP7 530 aa22.17■■□□□ 1.14
CHRNA4-209ENST00000627000 USP17L20D6RJB6 530 aa22.17■■□□□ 1.14
CHRNA4-209ENST00000627000 CBFA2T2O43439 604 aa22.17■■□□□ 1.14
CHRNA4-209ENST00000627000 COBLO75128 1261 aa22.17■■□□□ 1.14
CHRNA4-209ENST00000627000 RPN1P04843 607 aaKnown RBP22.17■■□□□ 1.14
CHRNA4-209ENST00000627000 PLCG1P19174 1290 aa22.17■■□□□ 1.14
CHRNA4-209ENST00000627000 ECE1P42892 770 aa22.17■■□□□ 1.14
CHRNA4-209ENST00000627000 USP17L24Q0WX57 530 aa22.17■■□□□ 1.14
CHRNA4-209ENST00000627000 ORC2Q13416 577 aaPredicted RBP22.17■■□□□ 1.14
CHRNA4-209ENST00000627000 ARMCX5Q6P1M9 558 aa22.17■■□□□ 1.14
CHRNA4-209ENST00000627000 USP17L6PQ6QN14 398 aa22.17■■□□□ 1.14
CHRNA4-209ENST00000627000 SPICE1Q8N0Z3 855 aa22.17■■□□□ 1.14
CHRNA4-209ENST00000627000 AGBL3Q8NEM8 1001 aa22.17■■□□□ 1.14
CHRNA4-209ENST00000627000 GMCL1Q96IK5 515 aa22.17■■□□□ 1.14
CHRNA4-209ENST00000627000 MMTAG2Q9BU76 263 aaKnown RBP22.17■■□□□ 1.14
CHRNA4-209ENST00000627000 PPP1R1BQ9UD71 204 aaPredicted RBP22.17■■□□□ 1.14
CHRNA4-209ENST00000627000 SYNRGQ9UMZ2 1314 aa22.17■■□□□ 1.14
CHRNA4-209ENST00000627000 SKILP12757 684 aa22.16■■□□□ 1.14
CHRNA4-209ENST00000627000 CDK11BP21127 795 aaKnown RBP22.16■■□□□ 1.14
CHRNA4-209ENST00000627000 GSDMDP57764 484 aa22.16■■□□□ 1.14
CHRNA4-209ENST00000627000 DALRD3Q5D0E6 543 aaKnown RBP22.16■■□□□ 1.14
CHRNA4-209ENST00000627000 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.16■■□□□ 1.14
CHRNA4-209ENST00000627000 TAL1P17542 331 aaPredicted RBP22.16■■□□□ 1.14
CHRNA4-209ENST00000627000 IGSF22Q8N9C0 903 aa22.16■■□□□ 1.14
CHRNA4-209ENST00000627000 ACER1Q8TDN7 264 aa22.16■■□□□ 1.14
CHRNA4-209ENST00000627000 SCAF8Q9UPN6 1271 aaKnown RBP22.16■■□□□ 1.14
CHRNA4-209ENST00000627000 FER1L6Q2WGJ9 1857 aa22.16■■□□□ 1.14
CHRNA4-209ENST00000627000 BMP3P12645 472 aa22.15■■□□□ 1.14
CHRNA4-209ENST00000627000 IKQ13123 557 aaPredicted RBP22.15■■□□□ 1.14
CHRNA4-209ENST00000627000 NBPF9Q3BBW0 867 aa22.15■■□□□ 1.14
CHRNA4-209ENST00000627000 CT47A1Q5JQC4 288 aaPredicted RBP22.15■■□□□ 1.14
CHRNA4-209ENST00000627000 KIAA1755Q5JYT7 1200 aa22.15■■□□□ 1.14
CHRNA4-209ENST00000627000 SPATA1Q5VX52 437 aa22.15■■□□□ 1.14
CHRNA4-209ENST00000627000 MIGA2Q7L4E1 593 aa22.15■■□□□ 1.14
CHRNA4-209ENST00000627000 KBTBD4Q9NVX7 518 aa22.15■■□□□ 1.14
CHRNA4-209ENST00000627000 CTNND2Q9UQB3 1225 aa22.15■■□□□ 1.14
CHRNA4-209ENST00000627000 GDAQ9Y2T3 454 aa22.15■■□□□ 1.14
CHRNA4-209ENST00000627000 BRCA1P38398 1863 aaKnown RBP22.15■■□□□ 1.14
CHRNA4-209ENST00000627000 RRP9O43818 475 aaKnown RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms