RNA–Protein interactions for RNA: ENST00000626299.2

SOX2-OT-238, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 622 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-238ENST00000626299 KIF5BP33176 963 aa15.79■□□□□ 0.12
SOX2-OT-238ENST00000626299 CNTN2Q02246 1040 aa15.79■□□□□ 0.12
SOX2-OT-238ENST00000626299 MFSD14CQ5VZR4 134 aa15.79■□□□□ 0.12
SOX2-OT-238ENST00000626299 Q6ZUG5 572 aa15.79■□□□□ 0.12
SOX2-OT-238ENST00000626299 MICU3Q86XE3 530 aa15.79■□□□□ 0.12
SOX2-OT-238ENST00000626299 TMEM106CQ9BVX2 250 aa15.79■□□□□ 0.12
SOX2-OT-238ENST00000626299 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.79■□□□□ 0.12
SOX2-OT-238ENST00000626299 ZSWIM6Q9HCJ5 1215 aa15.79■□□□□ 0.12
SOX2-OT-238ENST00000626299 CYP39A1Q9NYL5 469 aa15.79■□□□□ 0.12
SOX2-OT-238ENST00000626299 PNMA2Q9UL42 364 aa15.79■□□□□ 0.12
SOX2-OT-238ENST00000626299 PFASO15067 1338 aa15.78■□□□□ 0.12
SOX2-OT-238ENST00000626299 KLF18A0A0U1RQI7 1052 aa15.78■□□□□ 0.12
SOX2-OT-238ENST00000626299 ZBTB5O15062 677 aa15.78■□□□□ 0.12
SOX2-OT-238ENST00000626299 GJB1P08034 283 aa15.78■□□□□ 0.12
SOX2-OT-238ENST00000626299 EN2P19622 333 aaPredicted RBP15.78■□□□□ 0.12
SOX2-OT-238ENST00000626299 CCND3P30281 292 aaPredicted RBP15.78■□□□□ 0.12
SOX2-OT-238ENST00000626299 NSMFQ6X4W1 530 aa15.78■□□□□ 0.12
SOX2-OT-238ENST00000626299 RUFY3Q7L099 469 aa15.78■□□□□ 0.12
SOX2-OT-238ENST00000626299 HOMER1Q86YM7 354 aa15.78■□□□□ 0.12
SOX2-OT-238ENST00000626299 FBXL16Q8N461 479 aa15.78■□□□□ 0.12
SOX2-OT-238ENST00000626299 SRBD1Q8N5C6 995 aaKnown RBP15.78■□□□□ 0.12
SOX2-OT-238ENST00000626299 FAM133AQ8N9E0 248 aa15.78■□□□□ 0.12
SOX2-OT-238ENST00000626299 FANCBQ8NB91 859 aa15.78■□□□□ 0.12
SOX2-OT-238ENST00000626299 TRPV1Q8NER1 839 aa15.78■□□□□ 0.12
SOX2-OT-238ENST00000626299 BRF1Q92994 677 aa15.78■□□□□ 0.12
SOX2-OT-238ENST00000626299 SHISA4Q96DD7 197 aa15.78■□□□□ 0.12
SOX2-OT-238ENST00000626299 PIGSQ96S52 555 aa15.78■□□□□ 0.12
SOX2-OT-238ENST00000626299 SPZ1Q9BXG8 430 aa15.78■□□□□ 0.12
SOX2-OT-238ENST00000626299 AGXT2Q9BYV1 514 aa15.78■□□□□ 0.12
SOX2-OT-238ENST00000626299 UPF3BQ9BZI7 483 aaKnown RBP15.78■□□□□ 0.12
SOX2-OT-238ENST00000626299 TM6SF1Q9BZW5 370 aa15.78■□□□□ 0.12
SOX2-OT-238ENST00000626299 HMX1Q9NP08 348 aaPredicted RBP15.78■□□□□ 0.12
SOX2-OT-238ENST00000626299 ASTN1O14525 1302 aa15.77■□□□□ 0.12
SOX2-OT-238ENST00000626299 ABCB11O95342 1321 aa15.77■□□□□ 0.12
SOX2-OT-238ENST00000626299 POTEB2H3BUK9 544 aa15.77■□□□□ 0.12
SOX2-OT-238ENST00000626299 CYBAP13498 195 aa15.77■□□□□ 0.12
SOX2-OT-238ENST00000626299 FGD1P98174 961 aa15.77■□□□□ 0.12
SOX2-OT-238ENST00000626299 APOBRQ0VD83 1088 aa15.77■□□□□ 0.12
SOX2-OT-238ENST00000626299 BAATQ14032 418 aaPredicted RBP15.77■□□□□ 0.12
SOX2-OT-238ENST00000626299 SLC30A10Q6XR72 485 aa15.77■□□□□ 0.12
SOX2-OT-238ENST00000626299 FBXO11Q86XK2 927 aa15.77■□□□□ 0.12
SOX2-OT-238ENST00000626299 CMTR1Q8N1G2 835 aaKnown RBP15.77■□□□□ 0.12
SOX2-OT-238ENST00000626299 U2AF1L4Q8WU68 220 aaKnown RBP15.77■□□□□ 0.12
SOX2-OT-238ENST00000626299 DEFB118Q96PH6 123 aa15.77■□□□□ 0.12
SOX2-OT-238ENST00000626299 TINF2Q9BSI4 451 aa15.77■□□□□ 0.12
SOX2-OT-238ENST00000626299 BRCA2P51587 3418 aa15.77■□□□□ 0.11
SOX2-OT-238ENST00000626299 SOWAHBA6NEL2 793 aa15.76■□□□□ 0.11
SOX2-OT-238ENST00000626299 ZBTB43O43298 467 aa15.76■□□□□ 0.11
SOX2-OT-238ENST00000626299 EIF5BO60841 1220 aaKnown RBP15.76■□□□□ 0.11
SOX2-OT-238ENST00000626299 GJA8P48165 433 aa15.76■□□□□ 0.11
SOX2-OT-238ENST00000626299 RGS19P49795 217 aa15.76■□□□□ 0.11
SOX2-OT-238ENST00000626299 GNAQP50148 359 aa15.76■□□□□ 0.11
SOX2-OT-238ENST00000626299 ANAPC15P60006 121 aa15.76■□□□□ 0.11
SOX2-OT-238ENST00000626299 TOB2Q14106 344 aaPredicted RBP15.76■□□□□ 0.11
SOX2-OT-238ENST00000626299 PRAMEF19Q5SWL8 479 aa15.76■□□□□ 0.11
SOX2-OT-238ENST00000626299 MAMDC4Q6UXC1 1216 aa15.76■□□□□ 0.11
SOX2-OT-238ENST00000626299 SYNE3Q6ZMZ3 975 aa15.76■□□□□ 0.11
SOX2-OT-238ENST00000626299 TMTC3Q6ZXV5 915 aa15.76■□□□□ 0.11
SOX2-OT-238ENST00000626299 ZNF467Q7Z7K2 595 aaPredicted RBP15.76■□□□□ 0.11
SOX2-OT-238ENST00000626299 PIBF1Q8WXW3 757 aa15.76■□□□□ 0.11
SOX2-OT-238ENST00000626299 IL17RAQ96F46 866 aa15.76■□□□□ 0.11
SOX2-OT-238ENST00000626299 PURBQ96QR8 312 aaKnown RBP15.76■□□□□ 0.11
SOX2-OT-238ENST00000626299 LZTS2Q9BRK4 669 aa15.76■□□□□ 0.11
SOX2-OT-238ENST00000626299 AMNQ9BXJ7 453 aa15.76■□□□□ 0.11
SOX2-OT-238ENST00000626299 CYP46A1Q9Y6A2 500 aa15.76■□□□□ 0.11
SOX2-OT-238ENST00000626299 SYNGAP1Q96PV0 1343 aa15.75■□□□□ 0.11
SOX2-OT-238ENST00000626299 PNMA6FA0A0J9YX94 578 aa15.75■□□□□ 0.11
SOX2-OT-238ENST00000626299 PTPDC1A2A3K4 754 aa15.75■□□□□ 0.11
SOX2-OT-238ENST00000626299 GOLGA8AA7E2F4 631 aa15.75■□□□□ 0.11
SOX2-OT-238ENST00000626299 GOLGA8BA8MQT2 603 aa15.75■□□□□ 0.11
SOX2-OT-238ENST00000626299 OPLAHO14841 1288 aa15.75■□□□□ 0.11
SOX2-OT-238ENST00000626299 SGPL1O95470 568 aa15.75■□□□□ 0.11
SOX2-OT-238ENST00000626299 SMARCA1P28370 1054 aa15.75■□□□□ 0.11
SOX2-OT-238ENST00000626299 RCAN1P53805 252 aa15.75■□□□□ 0.11
SOX2-OT-238ENST00000626299 MSL3Q8N5Y2 521 aaKnown RBP15.75■□□□□ 0.11
SOX2-OT-238ENST00000626299 FAM217BQ9NTX9 383 aaPredicted RBP15.75■□□□□ 0.11
SOX2-OT-238ENST00000626299 PCDHA1Q9Y5I3 950 aa15.75■□□□□ 0.11
SOX2-OT-238ENST00000626299 SNAI1O95863 264 aaPredicted RBP15.74■□□□□ 0.11
SOX2-OT-238ENST00000626299 CDC27P30260 824 aa15.74■□□□□ 0.11
SOX2-OT-238ENST00000626299 RPS6P62753 249 aaKnown RBP15.74■□□□□ 0.11
SOX2-OT-238ENST00000626299 FUT2Q10981 343 aa15.74■□□□□ 0.11
SOX2-OT-238ENST00000626299 RTN1Q16799 776 aa15.74■□□□□ 0.11
SOX2-OT-238ENST00000626299 LHX8Q68G74 356 aa15.74■□□□□ 0.11
SOX2-OT-238ENST00000626299 RNF207Q6ZRF8 634 aa15.74■□□□□ 0.11
SOX2-OT-238ENST00000626299 CCDC82Q8N4S0 544 aa15.74■□□□□ 0.11
SOX2-OT-238ENST00000626299 RGS22Q8NE09 1264 aa15.74■□□□□ 0.11
SOX2-OT-238ENST00000626299 TBC1D5Q92609 795 aa15.74■□□□□ 0.11
SOX2-OT-238ENST00000626299 RRP36Q96EU6 259 aaKnown RBP15.74■□□□□ 0.11
SOX2-OT-238ENST00000626299 CRISPLD2Q9H0B8 497 aa15.74■□□□□ 0.11
SOX2-OT-238ENST00000626299 RBM28Q9NW13 759 aaKnown RBP15.74■□□□□ 0.11
SOX2-OT-238ENST00000626299 NAP1L2Q9ULW6 460 aaPredicted RBP15.74■□□□□ 0.11
SOX2-OT-238ENST00000626299 MRPL11Q9Y3B7 192 aaKnown RBP15.74■□□□□ 0.11
SOX2-OT-238ENST00000626299 DDX49Q9Y6V7 483 aaKnown RBP15.74■□□□□ 0.11
SOX2-OT-238ENST00000626299 RBBP6Q7Z6E9 1792 aaKnown RBP15.74■□□□□ 0.11
SOX2-OT-238ENST00000626299 NID2Q14112 1375 aa15.74■□□□□ 0.11
SOX2-OT-238ENST00000626299 CNTNAP5Q8WYK1 1306 aa15.73■□□□□ 0.11
SOX2-OT-238ENST00000626299 ZNF865P0CJ78 1059 aaPredicted RBP15.73■□□□□ 0.11
SOX2-OT-238ENST00000626299 CALML3P27482 149 aa15.73■□□□□ 0.11
SOX2-OT-238ENST00000626299 CNGA1P29973 690 aa15.73■□□□□ 0.11
SOX2-OT-238ENST00000626299 METAP2P50579 478 aaKnown RBP eCLIP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms