RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 ALAS1P13196 640 aa11.14□□□□□ -0.63
LINC01560-202ENST00000624822 CYP2B6P20813 491 aa11.14□□□□□ -0.63
LINC01560-202ENST00000624822 COPB2P35606 906 aa11.14□□□□□ -0.63
LINC01560-202ENST00000624822 SYNE3Q6ZMZ3 975 aa11.14□□□□□ -0.63
LINC01560-202ENST00000624822 RAB11FIP4Q86YS3 637 aa11.14□□□□□ -0.63
LINC01560-202ENST00000624822 RIOX2Q8IUF8 465 aa11.14□□□□□ -0.63
LINC01560-202ENST00000624822 ZNF654Q8IZM8 581 aa11.14□□□□□ -0.63
LINC01560-202ENST00000624822 SHCBP1Q8NEM2 672 aa11.14□□□□□ -0.63
LINC01560-202ENST00000624822 REPS2Q8NFH8 660 aa11.14□□□□□ -0.63
LINC01560-202ENST00000624822 CTCFLQ8NI51 663 aaPredicted RBP11.14□□□□□ -0.63
LINC01560-202ENST00000624822 SOCS4Q8WXH5 440 aa11.14□□□□□ -0.63
LINC01560-202ENST00000624822 KCNB2Q92953 911 aa11.14□□□□□ -0.63
LINC01560-202ENST00000624822 ABHD8Q96I13 439 aa11.14□□□□□ -0.63
LINC01560-202ENST00000624822 MYL10Q9BUA6 226 aa11.14□□□□□ -0.63
LINC01560-202ENST00000624822 VAT1LQ9HCJ6 419 aa11.14□□□□□ -0.63
LINC01560-202ENST00000624822 SLC12A7Q9Y666 1083 aa11.14□□□□□ -0.63
LINC01560-202ENST00000624822 WDR19Q8NEZ3 1342 aa11.13□□□□□ -0.63
LINC01560-202ENST00000624822 ADCY3O60266 1144 aa11.13□□□□□ -0.63
LINC01560-202ENST00000624822 DDAH1O94760 285 aa11.13□□□□□ -0.63
LINC01560-202ENST00000624822 MYCP01106 439 aaPredicted RBP11.13□□□□□ -0.63
LINC01560-202ENST00000624822 FCER1AP12319 257 aa11.13□□□□□ -0.63
LINC01560-202ENST00000624822 RXRAP19793 462 aa11.13□□□□□ -0.63
LINC01560-202ENST00000624822 PTPREP23469 700 aa11.13□□□□□ -0.63
LINC01560-202ENST00000624822 GRK4P32298 578 aa11.13□□□□□ -0.63
LINC01560-202ENST00000624822 RGS2P41220 211 aa11.13□□□□□ -0.63
LINC01560-202ENST00000624822 LIFRP42702 1097 aa11.13□□□□□ -0.63
LINC01560-202ENST00000624822 OAZ1P54368 228 aa11.13□□□□□ -0.63
LINC01560-202ENST00000624822 KCTD2Q14681 263 aa11.13□□□□□ -0.63
LINC01560-202ENST00000624822 GRM4Q14833 912 aa11.13□□□□□ -0.63
LINC01560-202ENST00000624822 C8orf34Q49A92 452 aa11.13□□□□□ -0.63
LINC01560-202ENST00000624822 BTNL9Q6UXG8 535 aa11.13□□□□□ -0.63
LINC01560-202ENST00000624822 Q6ZUG5 572 aa11.13□□□□□ -0.63
LINC01560-202ENST00000624822 NBPF11Q86T75 865 aa11.13□□□□□ -0.63
LINC01560-202ENST00000624822 DPP9Q86TI2 863 aa11.13□□□□□ -0.63
LINC01560-202ENST00000624822 MICU3Q86XE3 530 aa11.13□□□□□ -0.63
LINC01560-202ENST00000624822 CCDC144CPQ8IYA2 1237 aa11.13□□□□□ -0.63
LINC01560-202ENST00000624822 STAG2Q8N3U4 1231 aa11.13□□□□□ -0.63
LINC01560-202ENST00000624822 SH3TC2Q8TF17 1288 aa11.13□□□□□ -0.63
LINC01560-202ENST00000624822 AGBL1Q96MI9 1066 aa11.13□□□□□ -0.63
LINC01560-202ENST00000624822 MMP19Q99542 508 aa11.13□□□□□ -0.63
LINC01560-202ENST00000624822 RANBP17Q9H2T7 1088 aaKnown RBP11.13□□□□□ -0.63
LINC01560-202ENST00000624822 MAD2L2Q9UI95 211 aa11.13□□□□□ -0.63
LINC01560-202ENST00000624822 CCPG1Q9ULG6 757 aa11.13□□□□□ -0.63
LINC01560-202ENST00000624822 MCM3APO60318 1980 aa11.12□□□□□ -0.63
LINC01560-202ENST00000624822 SLC15A5A6NIM6 579 aa11.12□□□□□ -0.63
LINC01560-202ENST00000624822 CCDC85CA6NKD9 419 aa11.12□□□□□ -0.63
LINC01560-202ENST00000624822 KLRF2D3W0D1 207 aa11.12□□□□□ -0.63
LINC01560-202ENST00000624822 ATP2A1O14983 1001 aa11.12□□□□□ -0.63
LINC01560-202ENST00000624822 STRNO43815 780 aa11.12□□□□□ -0.63
LINC01560-202ENST00000624822 ICAM1P05362 532 aa11.12□□□□□ -0.63
LINC01560-202ENST00000624822 CALM1P0DP23 149 aa11.12□□□□□ -0.63
LINC01560-202ENST00000624822 CALM2P0DP24 149 aa11.12□□□□□ -0.63
LINC01560-202ENST00000624822 CALM3P0DP25 149 aa11.12□□□□□ -0.63
LINC01560-202ENST00000624822 ELNP15502 786 aa11.12□□□□□ -0.63
LINC01560-202ENST00000624822 RPS6KB1P23443 525 aa11.12□□□□□ -0.63
LINC01560-202ENST00000624822 ADORA2AP29274 412 aa11.12□□□□□ -0.63
LINC01560-202ENST00000624822 KIF5BP33176 963 aa11.12□□□□□ -0.63
LINC01560-202ENST00000624822 EXOSC10Q01780 885 aaKnown RBP11.12□□□□□ -0.63
LINC01560-202ENST00000624822 TROAPQ12815 778 aa11.12□□□□□ -0.63
LINC01560-202ENST00000624822 MAP2K5Q13163 448 aa11.12□□□□□ -0.63
LINC01560-202ENST00000624822 CDC37Q16543 378 aaPredicted RBP11.12□□□□□ -0.63
LINC01560-202ENST00000624822 USH1GQ495M9 461 aa11.12□□□□□ -0.63
LINC01560-202ENST00000624822 ADGRF4Q8IZF3 695 aa11.12□□□□□ -0.63
LINC01560-202ENST00000624822 HS6ST3Q8IZP7 471 aa11.12□□□□□ -0.63
LINC01560-202ENST00000624822 ANKRD35Q8N283 1001 aa11.12□□□□□ -0.63
LINC01560-202ENST00000624822 TRERF1Q96PN7 1200 aa11.12□□□□□ -0.63
LINC01560-202ENST00000624822 RNF146Q9NTX7 359 aa11.12□□□□□ -0.63
LINC01560-202ENST00000624822 SLC5A4Q9NY91 659 aa11.12□□□□□ -0.63
LINC01560-202ENST00000624822 RIPK3Q9Y572 518 aa11.12□□□□□ -0.63
LINC01560-202ENST00000624822 CYP46A1Q9Y6A2 500 aa11.12□□□□□ -0.63
LINC01560-202ENST00000624822 ZNF536O15090 1300 aa11.11□□□□□ -0.63
LINC01560-202ENST00000624822 LCTP09848 1927 aa11.11□□□□□ -0.63
LINC01560-202ENST00000624822 KLF18A0A0U1RQI7 1052 aa11.11□□□□□ -0.63
LINC01560-202ENST00000624822 PALM3A6NDB9 673 aaPredicted RBP11.11□□□□□ -0.63
LINC01560-202ENST00000624822 TAL1P17542 331 aaPredicted RBP11.11□□□□□ -0.63
LINC01560-202ENST00000624822 UBXN2AP68543 259 aa11.11□□□□□ -0.63
LINC01560-202ENST00000624822 IRF5Q13568 498 aa11.11□□□□□ -0.63
LINC01560-202ENST00000624822 GRB14Q14449 540 aa11.11□□□□□ -0.63
LINC01560-202ENST00000624822 MORN1Q5T089 497 aa11.11□□□□□ -0.63
LINC01560-202ENST00000624822 IFFO2Q5TF58 517 aa11.11□□□□□ -0.63
LINC01560-202ENST00000624822 RUFY3Q7L099 469 aa11.11□□□□□ -0.63
LINC01560-202ENST00000624822 HOMER1Q86YM7 354 aa11.11□□□□□ -0.63
LINC01560-202ENST00000624822 CHST13Q8NET6 341 aa11.11□□□□□ -0.63
LINC01560-202ENST00000624822 PIBF1Q8WXW3 757 aa11.11□□□□□ -0.63
LINC01560-202ENST00000624822 BRF1Q92994 677 aa11.11□□□□□ -0.63
LINC01560-202ENST00000624822 DDX11Q96FC9 970 aa11.11□□□□□ -0.63
LINC01560-202ENST00000624822 APBA2Q99767 749 aa11.11□□□□□ -0.63
LINC01560-202ENST00000624822 UPF3BQ9BZI7 483 aaKnown RBP11.11□□□□□ -0.63
LINC01560-202ENST00000624822 ACAD9Q9H845 621 aa11.11□□□□□ -0.63
LINC01560-202ENST00000624822 FBXO40Q9UH90 709 aa11.11□□□□□ -0.63
LINC01560-202ENST00000624822 GJD2Q9UKL4 321 aa11.11□□□□□ -0.63
LINC01560-202ENST00000624822 FRMPD3Q5JV73 1810 aa11.11□□□□□ -0.63
LINC01560-202ENST00000624822 GOLGA8AA7E2F4 631 aa11.1□□□□□ -0.63
LINC01560-202ENST00000624822 GOLGA8BA8MQT2 603 aa11.1□□□□□ -0.63
LINC01560-202ENST00000624822 ZBTB43O43298 467 aa11.1□□□□□ -0.63
LINC01560-202ENST00000624822 PGK2P07205 417 aa11.1□□□□□ -0.63
LINC01560-202ENST00000624822 APOBRQ0VD83 1088 aa11.1□□□□□ -0.63
LINC01560-202ENST00000624822 CCL14Q16627 93 aa11.1□□□□□ -0.63
LINC01560-202ENST00000624822 QRICH1Q2TAL8 776 aa11.1□□□□□ -0.63
LINC01560-202ENST00000624822 TKFCQ3LXA3 575 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms