RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 MIS18BP1Q6P0N0 1132 aa10.18□□□□□ -0.78
HDAC9-229ENST00000622668 ANO3Q9BYT9 981 aa10.18□□□□□ -0.78
HDAC9-229ENST00000622668 LSG1Q9H089 658 aaKnown RBP10.18□□□□□ -0.78
HDAC9-229ENST00000622668 NUB1Q9Y5A7 615 aa10.18□□□□□ -0.78
HDAC9-229ENST00000622668 ADGRB2O60241 1585 aa10.18□□□□□ -0.78
HDAC9-229ENST00000622668 USO1O60763 962 aaKnown RBP10.18□□□□□ -0.78
HDAC9-229ENST00000622668 KIF4AO95239 1232 aa10.18□□□□□ -0.78
HDAC9-229ENST00000622668 PDIA3P30101 505 aaKnown RBP10.18□□□□□ -0.78
HDAC9-229ENST00000622668 BACE1P56817 501 aa10.18□□□□□ -0.78
HDAC9-229ENST00000622668 TRPC3Q13507 836 aa10.18□□□□□ -0.78
HDAC9-229ENST00000622668 AMIGO3Q86WK7 504 aa10.18□□□□□ -0.78
HDAC9-229ENST00000622668 GTF3C2Q8WUA4 911 aaPredicted RBP10.18□□□□□ -0.78
HDAC9-229ENST00000622668 NLRP7Q8WX94 980 aa10.18□□□□□ -0.78
HDAC9-229ENST00000622668 CEP170P1Q96L14 293 aa10.18□□□□□ -0.78
HDAC9-229ENST00000622668 SPAG5Q96R06 1193 aa10.18□□□□□ -0.78
HDAC9-229ENST00000622668 NALCNQ8IZF0 1738 aa10.17□□□□□ -0.78
HDAC9-229ENST00000622668 PLEKHA8P1O95397 391 aa10.17□□□□□ -0.78
HDAC9-229ENST00000622668 RGS2P41220 211 aa10.17□□□□□ -0.78
HDAC9-229ENST00000622668 CCDC173Q0VFZ6 552 aa10.17□□□□□ -0.78
HDAC9-229ENST00000622668 ME3Q16798 604 aa10.17□□□□□ -0.78
HDAC9-229ENST00000622668 VPS36Q86VN1 386 aa10.17□□□□□ -0.78
HDAC9-229ENST00000622668 ENAHQ8N8S7 591 aaPredicted RBP10.17□□□□□ -0.78
HDAC9-229ENST00000622668 SPC24Q8NBT2 197 aa10.17□□□□□ -0.78
HDAC9-229ENST00000622668 TBCKQ8TEA7 893 aa10.17□□□□□ -0.78
HDAC9-229ENST00000622668 STAMQ92783 540 aa10.17□□□□□ -0.78
HDAC9-229ENST00000622668 GNAT1P11488 350 aa10.17□□□□□ -0.78
HDAC9-229ENST00000622668 ZNF354CQ86Y25 554 aa10.17□□□□□ -0.78
HDAC9-229ENST00000622668 SLFN12Q8IYM2 578 aa10.17□□□□□ -0.78
HDAC9-229ENST00000622668 MB21D1Q8N884 522 aa10.17□□□□□ -0.78
HDAC9-229ENST00000622668 JPH2Q9BR39 696 aaPredicted RBP10.17□□□□□ -0.78
HDAC9-229ENST00000622668 RNF26Q9BY78 433 aaPredicted RBP10.17□□□□□ -0.78
HDAC9-229ENST00000622668 NACA2Q9H009 215 aa10.17□□□□□ -0.78
HDAC9-229ENST00000622668 FAM205AQ6ZU69 1335 aa10.17□□□□□ -0.78
HDAC9-229ENST00000622668 INHBEP58166 350 aa10.17□□□□□ -0.78
HDAC9-229ENST00000622668 HSP90AA2PQ14568 343 aaPredicted RBP10.17□□□□□ -0.78
HDAC9-229ENST00000622668 CABP7Q86V35 215 aa10.17□□□□□ -0.78
HDAC9-229ENST00000622668 ZNF397Q8NF99 534 aaPredicted RBP10.17□□□□□ -0.78
HDAC9-229ENST00000622668 CPLX3Q8WVH0 158 aa10.17□□□□□ -0.78
HDAC9-229ENST00000622668 EXOC7Q9UPT5 735 aa10.17□□□□□ -0.78
HDAC9-229ENST00000622668 NEDD4P46934 1319 aa10.17□□□□□ -0.78
HDAC9-229ENST00000622668 MACROD2A1Z1Q3 448 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 SLC25A27O95847 323 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 TNNT3P45378 269 aaPredicted RBP10.16□□□□□ -0.78
HDAC9-229ENST00000622668 KIF23Q02241 960 aaPredicted RBP10.16□□□□□ -0.78
HDAC9-229ENST00000622668 MTMR1Q13613 665 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 FAM117BQ6P1L5 589 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 PLEKHH3Q7Z736 793 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 OR6J1Q8NGC5 347 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 GTF3C6Q969F1 213 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 AK9Q5TCS8 1911 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 MYO9BQ13459 2157 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 SH2B2O14492 632 aaPredicted RBP10.16□□□□□ -0.78
HDAC9-229ENST00000622668 RDXP35241 583 aaKnown RBP10.16□□□□□ -0.78
HDAC9-229ENST00000622668 VGLL4Q14135 290 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 C8orf34Q49A92 452 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 DCAF17Q5H9S7 520 aaPredicted RBP10.16□□□□□ -0.78
HDAC9-229ENST00000622668 GALNT17Q6IS24 598 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 NLRP4Q96MN2 994 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 WDR11Q9BZH6 1224 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 DDX19AQ9NUU7 478 aaKnown RBP10.16□□□□□ -0.78
HDAC9-229ENST00000622668 PARP2Q9UGN5 583 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 GCNT3O95395 438 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 YARSP54577 528 aaKnown RBP10.16□□□□□ -0.78
HDAC9-229ENST00000622668 PPP4CP60510 307 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 SP3Q02447 781 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 RDH13Q8NBN7 331 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 SPATA33Q96N06 139 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 LARSQ9P2J5 1176 aaKnown RBP10.16□□□□□ -0.78
HDAC9-229ENST00000622668 TPCN1Q9ULQ1 816 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 MAPK8IP1Q9UQF2 711 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 A0A1B0GVL5 298 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 SHTN1A0MZ66 631 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 CXCL11O14625 94 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 OR52Z1P0C646 297 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 LIFRP42702 1097 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 STX17P56962 302 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 NEDD9Q14511 834 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 CCDC70Q6NSX1 233 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 RNF180Q86T96 592 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 GBP3Q9H0R5 595 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 MRPL44Q9H9J2 332 aaKnown RBP10.16□□□□□ -0.78
HDAC9-229ENST00000622668 NYAP2Q9P242 653 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 PCDHAC2Q9Y5I4 1007 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 STK24Q9Y6E0 443 aa10.16□□□□□ -0.78
HDAC9-229ENST00000622668 ABCB11O95342 1321 aa10.15□□□□□ -0.78
HDAC9-229ENST00000622668 IRF6O14896 467 aa10.15□□□□□ -0.78
HDAC9-229ENST00000622668 CTAGE5O15320 804 aa10.15□□□□□ -0.78
HDAC9-229ENST00000622668 CBFA2T2O43439 604 aa10.15□□□□□ -0.78
HDAC9-229ENST00000622668 IGSF3O75054 1194 aa10.15□□□□□ -0.78
HDAC9-229ENST00000622668 TBC1D8O95759 1140 aa10.15□□□□□ -0.78
HDAC9-229ENST00000622668 RPL13P26373 211 aaKnown RBP10.15□□□□□ -0.78
HDAC9-229ENST00000622668 SMC1AQ14683 1233 aaKnown RBP10.15□□□□□ -0.78
HDAC9-229ENST00000622668 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.15□□□□□ -0.78
HDAC9-229ENST00000622668 NT5C3AQ9H0P0 336 aa10.15□□□□□ -0.78
HDAC9-229ENST00000622668 ZSWIM6Q9HCJ5 1215 aa10.15□□□□□ -0.78
HDAC9-229ENST00000622668 FRMD4BQ9Y2L6 1034 aa10.15□□□□□ -0.78
HDAC9-229ENST00000622668 XRN1Q8IZH2 1706 aaKnown RBP10.15□□□□□ -0.78
HDAC9-229ENST00000622668 SYCE3A1L190 88 aa10.15□□□□□ -0.78
HDAC9-229ENST00000622668 ERCC3P19447 782 aa10.15□□□□□ -0.78
HDAC9-229ENST00000622668 FAM114A1Q8IWE2 563 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms