RNA–Protein interactions for RNA: ENST00000622176.4

SLC6A6-209, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best)

Gene SLC6A6, Length 1,116 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-209ENST00000622176 ABRAQ8N0Z2 381 aa20.21■□□□□ 0.83
SLC6A6-209ENST00000622176 CLEC4DQ8WXI8 215 aa20.21■□□□□ 0.83
SLC6A6-209ENST00000622176 COA7Q96BR5 231 aa20.21■□□□□ 0.83
SLC6A6-209ENST00000622176 RNF26Q9BY78 433 aaPredicted RBP20.21■□□□□ 0.83
SLC6A6-209ENST00000622176 ACAD9Q9H845 621 aa20.21■□□□□ 0.83
SLC6A6-209ENST00000622176 HOMER2Q9NSB8 354 aa20.21■□□□□ 0.83
SLC6A6-209ENST00000622176 RBM27Q9P2N5 1060 aaKnown RBP20.21■□□□□ 0.83
SLC6A6-209ENST00000622176 GJD2Q9UKL4 321 aa20.21■□□□□ 0.83
SLC6A6-209ENST00000622176 SMCHD1A6NHR9 2005 aa20.2■□□□□ 0.83
SLC6A6-209ENST00000622176 hCG_1642624A0A1W2PR95 340 aa20.2■□□□□ 0.82
SLC6A6-209ENST00000622176 SLC15A5A6NIM6 579 aa20.2■□□□□ 0.82
SLC6A6-209ENST00000622176 CDKL5O76039 1030 aa20.2■□□□□ 0.82
SLC6A6-209ENST00000622176 HOXD10P28358 340 aa20.2■□□□□ 0.82
SLC6A6-209ENST00000622176 ST3GAL1Q11201 340 aa20.2■□□□□ 0.82
SLC6A6-209ENST00000622176 GRB14Q14449 540 aa20.2■□□□□ 0.82
SLC6A6-209ENST00000622176 USH1GQ495M9 461 aa20.2■□□□□ 0.82
SLC6A6-209ENST00000622176 MUM1L1Q5H9M0 696 aa20.2■□□□□ 0.82
SLC6A6-209ENST00000622176 PHKBQ93100 1093 aa20.2■□□□□ 0.82
SLC6A6-209ENST00000622176 CWC22Q9HCG8 908 aaKnown RBP20.2■□□□□ 0.82
SLC6A6-209ENST00000622176 PCDHA1Q9Y5I3 950 aa20.2■□□□□ 0.82
SLC6A6-209ENST00000622176 IVNS1ABPQ9Y6Y0 642 aa20.2■□□□□ 0.82
SLC6A6-209ENST00000622176 DOCK3Q8IZD9 2030 aa20.19■□□□□ 0.82
SLC6A6-209ENST00000622176 CCDC85CA6NKD9 419 aa20.19■□□□□ 0.82
SLC6A6-209ENST00000622176 CTDNEP1O95476 244 aa20.19■□□□□ 0.82
SLC6A6-209ENST00000622176 FCER1AP12319 257 aa20.19■□□□□ 0.82
SLC6A6-209ENST00000622176 MORN1Q5T089 497 aa20.19■□□□□ 0.82
SLC6A6-209ENST00000622176 OTOP1Q7RTM1 612 aa20.19■□□□□ 0.82
SLC6A6-209ENST00000622176 SOCS4Q8WXH5 440 aa20.19■□□□□ 0.82
SLC6A6-209ENST00000622176 USP6NLQ92738 828 aa20.19■□□□□ 0.82
SLC6A6-209ENST00000622176 TMX3Q96JJ7 454 aa20.19■□□□□ 0.82
SLC6A6-209ENST00000622176 MMP19Q99542 508 aa20.19■□□□□ 0.82
SLC6A6-209ENST00000622176 SLC26A6Q9BXS9 759 aa20.19■□□□□ 0.82
SLC6A6-209ENST00000622176 SRRDQ9UH36 339 aa20.19■□□□□ 0.82
SLC6A6-209ENST00000622176 MRPL11Q9Y3B7 192 aaKnown RBP20.19■□□□□ 0.82
SLC6A6-209ENST00000622176 MGAMO43451 1857 aa20.19■□□□□ 0.82
SLC6A6-209ENST00000622176 ZSWIM8A7E2V4 1837 aa20.18■□□□□ 0.82
SLC6A6-209ENST00000622176 PRMT2P55345 433 aa20.18■□□□□ 0.82
SLC6A6-209ENST00000622176 AKAP17AQ02040 695 aaKnown RBP20.18■□□□□ 0.82
SLC6A6-209ENST00000622176 SSRP1Q08945 709 aaKnown RBP20.18■□□□□ 0.82
SLC6A6-209ENST00000622176 KCTD2Q14681 263 aa20.18■□□□□ 0.82
SLC6A6-209ENST00000622176 PKN1Q16512 942 aa20.18■□□□□ 0.82
SLC6A6-209ENST00000622176 PFKFB3Q16875 520 aaPredicted RBP20.18■□□□□ 0.82
SLC6A6-209ENST00000622176 TRIM22Q8IYM9 498 aa20.18■□□□□ 0.82
SLC6A6-209ENST00000622176 RGS22Q8NE09 1264 aa20.18■□□□□ 0.82
SLC6A6-209ENST00000622176 NUDT12Q9BQG2 462 aa20.18■□□□□ 0.82
SLC6A6-209ENST00000622176 MAF1Q9H063 256 aa20.18■□□□□ 0.82
SLC6A6-209ENST00000622176 TRIM17Q9Y577 477 aa20.18■□□□□ 0.82
SLC6A6-209ENST00000622176 MYH6P13533 1939 aa20.17■□□□□ 0.82
SLC6A6-209ENST00000622176 NFIBO00712 420 aa20.17■□□□□ 0.82
SLC6A6-209ENST00000622176 SCG2P13521 617 aa20.17■□□□□ 0.82
SLC6A6-209ENST00000622176 CTU1Q7Z7A3 348 aaKnown RBP20.17■□□□□ 0.82
SLC6A6-209ENST00000622176 CCDC83Q8IWF9 413 aa20.17■□□□□ 0.82
SLC6A6-209ENST00000622176 NSUN7Q8NE18 718 aaKnown RBP20.17■□□□□ 0.82
SLC6A6-209ENST00000622176 SNX21Q969T3 373 aa20.17■□□□□ 0.82
SLC6A6-209ENST00000622176 A1CFQ9NQ94 594 aaKnown RBP20.17■□□□□ 0.82
SLC6A6-209ENST00000622176 hCG_1984214I3L0E3 225 aa20.16■□□□□ 0.82
SLC6A6-209ENST00000622176 OPLAHO14841 1288 aa20.16■□□□□ 0.82
SLC6A6-209ENST00000622176 TNRC18O15417 2968 aaPredicted RBP20.16■□□□□ 0.82
SLC6A6-209ENST00000622176 PPFIA3O75145 1194 aa20.16■□□□□ 0.82
SLC6A6-209ENST00000622176 ADORA2AP29274 412 aa20.16■□□□□ 0.82
SLC6A6-209ENST00000622176 FLT3LGP49771 235 aa20.16■□□□□ 0.82
SLC6A6-209ENST00000622176 PRKCZQ05513 592 aa20.16■□□□□ 0.82
SLC6A6-209ENST00000622176 MAP2K5Q13163 448 aa20.16■□□□□ 0.82
SLC6A6-209ENST00000622176 WWC2Q6AWC2 1192 aa20.16■□□□□ 0.82
SLC6A6-209ENST00000622176 HEATR3Q7Z4Q2 680 aa20.16■□□□□ 0.82
SLC6A6-209ENST00000622176 MCF2L2Q86YR7 1114 aa20.16■□□□□ 0.82
SLC6A6-209ENST00000622176 ANKRD35Q8N283 1001 aa20.16■□□□□ 0.82
SLC6A6-209ENST00000622176 ZNF713Q8N859 430 aaPredicted RBP20.16■□□□□ 0.82
SLC6A6-209ENST00000622176 LLPHQ9BRT6 129 aaKnown RBP20.16■□□□□ 0.82
SLC6A6-209ENST00000622176 GABRQQ9UN88 632 aa20.16■□□□□ 0.82
SLC6A6-209ENST00000622176 STK36Q9NRP7 1315 aa20.16■□□□□ 0.82
SLC6A6-209ENST00000622176 DNAJC25-GNG10A0A024R161 153 aa20.15■□□□□ 0.82
SLC6A6-209ENST00000622176 DEXIO95424 95 aa20.15■□□□□ 0.82
SLC6A6-209ENST00000622176 HOXC6P09630 235 aa20.15■□□□□ 0.82
SLC6A6-209ENST00000622176 GHRHRQ02643 423 aa20.15■□□□□ 0.82
SLC6A6-209ENST00000622176 IRF5Q13568 498 aa20.15■□□□□ 0.82
SLC6A6-209ENST00000622176 GPKOWQ92917 476 aaPredicted RBP eCLIP20.15■□□□□ 0.82
SLC6A6-209ENST00000622176 BARHL2Q9NY43 387 aa20.15■□□□□ 0.82
SLC6A6-209ENST00000622176 CYP39A1Q9NYL5 469 aa20.15■□□□□ 0.82
SLC6A6-209ENST00000622176 PFASO15067 1338 aa20.15■□□□□ 0.82
SLC6A6-209ENST00000622176 CENPFP49454 3210 aa20.14■□□□□ 0.82
SLC6A6-209ENST00000622176 HTTP42858 3142 aa20.14■□□□□ 0.82
SLC6A6-209ENST00000622176 ZNF236Q9UL36 1845 aa20.14■□□□□ 0.81
SLC6A6-209ENST00000622176 STXBP3O00186 592 aa20.14■□□□□ 0.81
SLC6A6-209ENST00000622176 COBLO75128 1261 aa20.14■□□□□ 0.81
SLC6A6-209ENST00000622176 XRCC5P13010 732 aaKnown RBP20.14■□□□□ 0.81
SLC6A6-209ENST00000622176 RGS2P41220 211 aa20.14■□□□□ 0.81
SLC6A6-209ENST00000622176 PPP1R18Q6NYC8 613 aa20.14■□□□□ 0.81
SLC6A6-209ENST00000622176 NSMFQ6X4W1 530 aa20.14■□□□□ 0.81
SLC6A6-209ENST00000622176 SAMD3Q8N6K7 520 aa20.14■□□□□ 0.81
SLC6A6-209ENST00000622176 DDX11Q96FC9 970 aa20.14■□□□□ 0.81
SLC6A6-209ENST00000622176 ORC3Q9UBD5 711 aaPredicted RBP20.14■□□□□ 0.81
SLC6A6-209ENST00000622176 PTPDC1A2A3K4 754 aa20.13■□□□□ 0.81
SLC6A6-209ENST00000622176 JAK2O60674 1132 aa20.13■□□□□ 0.81
SLC6A6-209ENST00000622176 FDPSP14324 419 aaKnown RBP20.13■□□□□ 0.81
SLC6A6-209ENST00000622176 RPS6P62753 249 aaKnown RBP20.13■□□□□ 0.81
SLC6A6-209ENST00000622176 BAATQ14032 418 aaPredicted RBP20.13■□□□□ 0.81
SLC6A6-209ENST00000622176 PKN2Q16513 984 aaKnown RBP20.13■□□□□ 0.81
SLC6A6-209ENST00000622176 TYW1BQ6NUM6 668 aa20.13■□□□□ 0.81
SLC6A6-209ENST00000622176 RNF207Q6ZRF8 634 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms