RNA–Protein interactions for RNA: ENST00000622098.4

CDK16-223, Transcript of cyclin dependent kinase 16, human

TSL 2 BASIC

Gene CDK16, Length 2,968 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-223	ENST00000622098	SAP30BP	Q9UHR5	308 aa	Known RBP	19.85	■□□□□ 0.77
CDK16-223	ENST00000622098	SAR1B	Q9Y6B6	198 aa		19.85	■□□□□ 0.77
CDK16-223	ENST00000622098	FLT1	P17948	1338 aa		19.85	■□□□□ 0.77
CDK16-223	ENST00000622098	ZBTB22	O15209	634 aa		19.85	■□□□□ 0.77
CDK16-223	ENST00000622098	PRPH	P41219	470 aa		19.85	■□□□□ 0.77
CDK16-223	ENST00000622098	NAPA	P54920	295 aa		19.85	■□□□□ 0.77
CDK16-223	ENST00000622098	ASIC1	P78348	528 aa		19.85	■□□□□ 0.77
CDK16-223	ENST00000622098	KRT83	P78385	493 aa		19.85	■□□□□ 0.77
CDK16-223	ENST00000622098	ANKRD40	Q6AI12	368 aa		19.85	■□□□□ 0.77
CDK16-223	ENST00000622098	P2RX5	Q93086	422 aa		19.85	■□□□□ 0.77
CDK16-223	ENST00000622098	CAPZA3	Q96KX2	299 aa		19.85	■□□□□ 0.77
CDK16-223	ENST00000622098	TRIM9	Q9C026	710 aa		19.85	■□□□□ 0.77
CDK16-223	ENST00000622098	PALM3	A6NDB9	673 aa	Predicted RBP	19.84	■□□□□ 0.77
CDK16-223	ENST00000622098	KLRF2	D3W0D1	207 aa		19.84	■□□□□ 0.77
CDK16-223	ENST00000622098	MEA1	Q16626	185 aa		19.84	■□□□□ 0.77
CDK16-223	ENST00000622098	NOC3L	Q8WTT2	800 aa	Known RBP	19.84	■□□□□ 0.77
CDK16-223	ENST00000622098	JAKMIP2	Q96AA8	810 aa		19.84	■□□□□ 0.77
CDK16-223	ENST00000622098	CNOT6L	Q96LI5	555 aa	Known RBP	19.84	■□□□□ 0.77
CDK16-223	ENST00000622098	MMS19	Q96T76	1030 aa		19.84	■□□□□ 0.77
CDK16-223	ENST00000622098	TTYH3	Q9C0H2	523 aa		19.84	■□□□□ 0.77
CDK16-223	ENST00000622098	ZNHIT6	Q9NWK9	470 aa	Known RBP	19.84	■□□□□ 0.77
CDK16-223	ENST00000622098	COL5A3	P25940	1745 aa	Predicted RBP	19.84	■□□□□ 0.77
CDK16-223	ENST00000622098	RASSF10	A6NK89	507 aa		19.84	■□□□□ 0.77
CDK16-223	ENST00000622098	OR52Z1	P0C646	297 aa		19.84	■□□□□ 0.77
CDK16-223	ENST00000622098	FCER1A	P12319	257 aa		19.84	■□□□□ 0.77
CDK16-223	ENST00000622098	GRIK5	Q16478	980 aa		19.84	■□□□□ 0.77
CDK16-223	ENST00000622098	ZSCAN26	Q16670	478 aa		19.84	■□□□□ 0.77
CDK16-223	ENST00000622098	CCDC102A	Q96A19	550 aa		19.84	■□□□□ 0.77
CDK16-223	ENST00000622098	LACRT	Q9GZZ8	138 aa		19.84	■□□□□ 0.77
CDK16-223	ENST00000622098	ANKIB1	Q9P2G1	1089 aa		19.84	■□□□□ 0.77
CDK16-223	ENST00000622098	ROBO1	Q9Y6N7	1651 aa		19.84	■□□□□ 0.77
CDK16-223	ENST00000622098	RCCD1	A6NED2	376 aa		19.83	■□□□□ 0.77
CDK16-223	ENST00000622098	KRT86	O43790	486 aa		19.83	■□□□□ 0.77
CDK16-223	ENST00000622098	TUBB	P07437	444 aa		19.83	■□□□□ 0.77
CDK16-223	ENST00000622098	CCNE1	P24864	410 aa		19.83	■□□□□ 0.77
CDK16-223	ENST00000622098	MTIF2	P46199	727 aa	Known RBP	19.83	■□□□□ 0.77
CDK16-223	ENST00000622098	MAPKAPK5	Q8IW41	473 aa		19.83	■□□□□ 0.77
CDK16-223	ENST00000622098	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	19.83	■□□□□ 0.77
CDK16-223	ENST00000622098	FAN1	Q9Y2M0	1017 aa		19.83	■□□□□ 0.77
CDK16-223	ENST00000622098	CYLC1	P35663	651 aa	Predicted RBP	19.83	■□□□□ 0.77
CDK16-223	ENST00000622098	WDR93	Q6P2C0	686 aa		19.83	■□□□□ 0.77
CDK16-223	ENST00000622098	CCDC47	Q96A33	483 aa	Known RBP	19.83	■□□□□ 0.77
CDK16-223	ENST00000622098	CUEDC2	Q9H467	287 aa		19.83	■□□□□ 0.77
CDK16-223	ENST00000622098	SPATA31A5	Q5VU36	1347 aa		19.83	■□□□□ 0.76
CDK16-223	ENST00000622098	SPATA31A7	Q8IWB4	1347 aa		19.83	■□□□□ 0.76
CDK16-223	ENST00000622098	BICDL2	A1A5D9	508 aa		19.83	■□□□□ 0.76
CDK16-223	ENST00000622098	LRRIQ3	A6PVS8	624 aa	Predicted RBP	19.83	■□□□□ 0.76
CDK16-223	ENST00000622098	PHACTR2	O75167	634 aa		19.83	■□□□□ 0.76
CDK16-223	ENST00000622098	IPO7	O95373	1038 aa	Known RBP	19.83	■□□□□ 0.76
CDK16-223	ENST00000622098	TEC	P42680	631 aa		19.83	■□□□□ 0.76
CDK16-223	ENST00000622098	TMED8	Q6PL24	325 aa	Predicted RBP	19.83	■□□□□ 0.76
CDK16-223	ENST00000622098	TPTE2	Q6XPS3	522 aa		19.83	■□□□□ 0.76
CDK16-223	ENST00000622098	HPS3	Q969F9	1004 aa		19.83	■□□□□ 0.76
CDK16-223	ENST00000622098	AK8	Q96MA6	479 aa		19.83	■□□□□ 0.76
CDK16-223	ENST00000622098	NOC4L	Q9BVI4	516 aa	Known RBP	19.83	■□□□□ 0.76
CDK16-223	ENST00000622098	ZMYND12	Q9H0C1	365 aa		19.83	■□□□□ 0.76
CDK16-223	ENST00000622098	PSD3	Q9NYI0	1048 aa		19.83	■□□□□ 0.76
CDK16-223	ENST00000622098	ROBO3	Q96MS0	1386 aa		19.82	■□□□□ 0.76
CDK16-223	ENST00000622098	MAST2	Q6P0Q8	1798 aa		19.82	■□□□□ 0.76
CDK16-223	ENST00000622098	NKRF	O15226	690 aa	Known RBP eCLIP	19.82	■□□□□ 0.76
CDK16-223	ENST00000622098	BAG3	O95817	575 aa		19.82	■□□□□ 0.76
CDK16-223	ENST00000622098	RASA1	P20936	1047 aa		19.82	■□□□□ 0.76
CDK16-223	ENST00000622098	MSL3	Q8N5Y2	521 aa	Known RBP	19.82	■□□□□ 0.76
CDK16-223	ENST00000622098	NUP58	Q9BVL2	599 aa		19.82	■□□□□ 0.76
CDK16-223	ENST00000622098	NARF	Q9UHQ1	456 aa		19.82	■□□□□ 0.76
CDK16-223	ENST00000622098	DUSP10	Q9Y6W6	482 aa		19.82	■□□□□ 0.76
CDK16-223	ENST00000622098	SMCO2	A6NFE2	343 aa		19.82	■□□□□ 0.76
CDK16-223	ENST00000622098	CYP27A1	Q02318	531 aa		19.82	■□□□□ 0.76
CDK16-223	ENST00000622098	NONO	Q15233	471 aa	Known RBP eCLIP	19.82	■□□□□ 0.76
CDK16-223	ENST00000622098	HSP90B2P	Q58FF3	399 aa		19.82	■□□□□ 0.76
CDK16-223	ENST00000622098	PAPD7	Q5XG87	772 aa	Known RBP	19.82	■□□□□ 0.76
CDK16-223	ENST00000622098	WDR66	Q8TBY9	1149 aa		19.82	■□□□□ 0.76
CDK16-223	ENST00000622098	MAGEF1	Q9HAY2	307 aa		19.82	■□□□□ 0.76
CDK16-223	ENST00000622098	IRS2	Q9Y4H2	1338 aa		19.82	■□□□□ 0.76
CDK16-223	ENST00000622098	TM4SF1	P30408	202 aa		19.81	■□□□□ 0.76
CDK16-223	ENST00000622098	USP14	P54578	494 aa		19.81	■□□□□ 0.76
CDK16-223	ENST00000622098	ZBED6	P86452	979 aa		19.81	■□□□□ 0.76
CDK16-223	ENST00000622098	SEMA3F	Q13275	785 aa		19.81	■□□□□ 0.76
CDK16-223	ENST00000622098	KRT25	Q7Z3Z0	450 aa		19.81	■□□□□ 0.76
CDK16-223	ENST00000622098	EHBP1	Q8NDI1	1231 aa		19.81	■□□□□ 0.76
CDK16-223	ENST00000622098	NUTM2B	A6NNL0	878 aa	Predicted RBP	19.81	■□□□□ 0.76
CDK16-223	ENST00000622098	NUTM2E	B1AL46	878 aa	Predicted RBP	19.81	■□□□□ 0.76
CDK16-223	ENST00000622098	ZPR1	O75312	459 aa		19.81	■□□□□ 0.76
CDK16-223	ENST00000622098	MUM1L1	Q5H9M0	696 aa		19.81	■□□□□ 0.76
CDK16-223	ENST00000622098	RETREG2	Q8NC44	543 aa		19.81	■□□□□ 0.76
CDK16-223	ENST00000622098	VAT1L	Q9HCJ6	419 aa		19.81	■□□□□ 0.76
CDK16-223	ENST00000622098	MACROD2	A1Z1Q3	448 aa		19.8	■□□□□ 0.76
CDK16-223	ENST00000622098	MIIP	Q5JXC2	388 aa		19.8	■□□□□ 0.76
CDK16-223	ENST00000622098	USP17L2	Q6R6M4	530 aa		19.8	■□□□□ 0.76
CDK16-223	ENST00000622098	FAM114A1	Q8IWE2	563 aa		19.8	■□□□□ 0.76
CDK16-223	ENST00000622098	CNTNAP4	Q9C0A0	1308 aa		19.8	■□□□□ 0.76
CDK16-223	ENST00000622098	NT5C2	P49902	561 aa		19.8	■□□□□ 0.76
CDK16-223	ENST00000622098	IRX5	P78411	483 aa	Predicted RBP	19.8	■□□□□ 0.76
CDK16-223	ENST00000622098	RAD51AP2	Q09MP3	1159 aa		19.8	■□□□□ 0.76
CDK16-223	ENST00000622098	PTF1A	Q7RTS3	328 aa		19.8	■□□□□ 0.76
CDK16-223	ENST00000622098	NEK8	Q86SG6	692 aa		19.8	■□□□□ 0.76
CDK16-223	ENST00000622098	GPR101	Q96P66	508 aa	Predicted RBP	19.8	■□□□□ 0.76
CDK16-223	ENST00000622098	C7orf25	Q9BPX7	421 aa		19.8	■□□□□ 0.76
CDK16-223	ENST00000622098	LZTS2	Q9BRK4	669 aa		19.8	■□□□□ 0.76
CDK16-223	ENST00000622098	EIF3CL	B5ME19	914 aa	Known RBP	19.8	■□□□□ 0.76

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms