RNA–Protein interactions for RNA: ENST00000621790.4

TARDBP-226, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-226ENST00000621790 CAPNS2Q96L46 248 aa13.38□□□□□ -0.27
TARDBP-226ENST00000621790 PSTPIP2Q9H939 334 aa13.38□□□□□ -0.27
TARDBP-226ENST00000621790 ZNF214Q9UL59 606 aaPredicted RBP13.38□□□□□ -0.27
TARDBP-226ENST00000621790 BAZ2BQ9UIF8 2168 aaKnown RBP13.38□□□□□ -0.27
TARDBP-226ENST00000621790 PIK3CDO00329 1044 aa13.37□□□□□ -0.27
TARDBP-226ENST00000621790 F13A1P00488 732 aa13.37□□□□□ -0.27
TARDBP-226ENST00000621790 FOSP01100 380 aaPredicted RBP13.37□□□□□ -0.27
TARDBP-226ENST00000621790 CCNA1P78396 465 aa13.37□□□□□ -0.27
TARDBP-226ENST00000621790 KIF23Q02241 960 aaPredicted RBP13.37□□□□□ -0.27
TARDBP-226ENST00000621790 GHRHRQ02643 423 aa13.37□□□□□ -0.27
TARDBP-226ENST00000621790 MKRN3Q13064 507 aaKnown RBP13.37□□□□□ -0.27
TARDBP-226ENST00000621790 SAMD1Q6SPF0 538 aaPredicted RBP13.37□□□□□ -0.27
TARDBP-226ENST00000621790 PAXIP1Q6ZW49 1069 aaPredicted RBP13.37□□□□□ -0.27
TARDBP-226ENST00000621790 IFNL1Q8IU54 200 aa13.37□□□□□ -0.27
TARDBP-226ENST00000621790 RIOX2Q8IUF8 465 aa13.37□□□□□ -0.27
TARDBP-226ENST00000621790 DIS3L2Q8IYB7 885 aaKnown RBP13.37□□□□□ -0.27
TARDBP-226ENST00000621790 CPXCR1Q8N123 301 aa13.37□□□□□ -0.27
TARDBP-226ENST00000621790 FAM43AQ8N2R8 423 aa13.37□□□□□ -0.27
TARDBP-226ENST00000621790 SHCBP1Q8NEM2 672 aa13.37□□□□□ -0.27
TARDBP-226ENST00000621790 SMCR8Q8TEV9 937 aaPredicted RBP13.37□□□□□ -0.27
TARDBP-226ENST00000621790 PTPN18Q99952 460 aa13.37□□□□□ -0.27
TARDBP-226ENST00000621790 RLFQ13129 1914 aa13.37□□□□□ -0.27
TARDBP-226ENST00000621790 PARP14Q460N5 1801 aa13.36□□□□□ -0.27
TARDBP-226ENST00000621790 AP3B2Q13367 1082 aa13.36□□□□□ -0.27
TARDBP-226ENST00000621790 TMEM132BQ14DG7 1078 aa13.36□□□□□ -0.27
TARDBP-226ENST00000621790 USH1GQ495M9 461 aa13.36□□□□□ -0.27
TARDBP-226ENST00000621790 MCTP1Q6DN14 999 aa13.36□□□□□ -0.27
TARDBP-226ENST00000621790 TYW1BQ6NUM6 668 aa13.36□□□□□ -0.27
TARDBP-226ENST00000621790 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.36□□□□□ -0.27
TARDBP-226ENST00000621790 KRT25Q7Z3Z0 450 aa13.36□□□□□ -0.27
TARDBP-226ENST00000621790 NOSTRINQ8IVI9 506 aa13.36□□□□□ -0.27
TARDBP-226ENST00000621790 REXO1Q8N1G1 1221 aaKnown RBP13.36□□□□□ -0.27
TARDBP-226ENST00000621790 AGBL1Q96MI9 1066 aa13.36□□□□□ -0.27
TARDBP-226ENST00000621790 SPATC1LQ9H0A9 340 aa13.36□□□□□ -0.27
TARDBP-226ENST00000621790 ZFYVE28Q9HCC9 887 aa13.36□□□□□ -0.27
TARDBP-226ENST00000621790 RAVER2Q9HCJ3 691 aaKnown RBP13.36□□□□□ -0.27
TARDBP-226ENST00000621790 MORF4L1Q9UBU8 362 aa13.36□□□□□ -0.27
TARDBP-226ENST00000621790 KCNJ14Q9UNX9 436 aa13.36□□□□□ -0.27
TARDBP-226ENST00000621790 GCOM1H8Y6P7 765 aaPredicted RBP13.35□□□□□ -0.27
TARDBP-226ENST00000621790 M0R2N6 131 aa13.35□□□□□ -0.27
TARDBP-226ENST00000621790 POLR2MP0CAP2 368 aa13.35□□□□□ -0.27
TARDBP-226ENST00000621790 ALAS1P13196 640 aa13.35□□□□□ -0.27
TARDBP-226ENST00000621790 TRAPPC10P48553 1259 aa13.35□□□□□ -0.27
TARDBP-226ENST00000621790 SNAP25P60880 206 aa13.35□□□□□ -0.27
TARDBP-226ENST00000621790 GUCY1B3Q02153 619 aa13.35□□□□□ -0.27
TARDBP-226ENST00000621790 RESTQ13127 1097 aa13.35□□□□□ -0.27
TARDBP-226ENST00000621790 NPY5RQ15761 445 aa13.35□□□□□ -0.27
TARDBP-226ENST00000621790 SNRNP48Q6IEG0 339 aaKnown RBP13.35□□□□□ -0.27
TARDBP-226ENST00000621790 CYP4F22Q6NT55 531 aa13.35□□□□□ -0.27
TARDBP-226ENST00000621790 GPRC5AQ8NFJ5 357 aa13.35□□□□□ -0.27
TARDBP-226ENST00000621790 TRERF1Q96PN7 1200 aa13.35□□□□□ -0.27
TARDBP-226ENST00000621790 MROH8Q9H579 483 aa13.35□□□□□ -0.27
TARDBP-226ENST00000621790 ACAD9Q9H845 621 aa13.35□□□□□ -0.27
TARDBP-226ENST00000621790 EHMT1Q9H9B1 1298 aa13.35□□□□□ -0.27
TARDBP-226ENST00000621790 RBPJLQ9UBG7 517 aa13.35□□□□□ -0.27
TARDBP-226ENST00000621790 ZDHHC9Q9Y397 364 aa13.35□□□□□ -0.27
TARDBP-226ENST00000621790 A0A0G2JMZ2 1700 aa13.34□□□□□ -0.27
TARDBP-226ENST00000621790 CCDC194A0A1B0GVG4 234 aa13.34□□□□□ -0.27
TARDBP-226ENST00000621790 BTBD18B2RXH4 712 aa13.34□□□□□ -0.27
TARDBP-226ENST00000621790 IGF2BP3O00425 579 aaKnown RBP eCLIP13.34□□□□□ -0.27
TARDBP-226ENST00000621790 CA12O43570 354 aa13.34□□□□□ -0.27
TARDBP-226ENST00000621790 DTNBO60941 627 aa13.34□□□□□ -0.27
TARDBP-226ENST00000621790 CLK2P49760 499 aaKnown RBP13.34□□□□□ -0.27
TARDBP-226ENST00000621790 FOSBP53539 338 aa13.34□□□□□ -0.27
TARDBP-226ENST00000621790 ERVK-9P63128 1117 aa13.34□□□□□ -0.27
TARDBP-226ENST00000621790 ERVK-24P63145 666 aa13.34□□□□□ -0.27
TARDBP-226ENST00000621790 PKP1Q13835 747 aa13.34□□□□□ -0.27
TARDBP-226ENST00000621790 PLS1Q14651 629 aa13.34□□□□□ -0.27
TARDBP-226ENST00000621790 TAF1CQ15572 869 aaPredicted RBP13.34□□□□□ -0.27
TARDBP-226ENST00000621790 FAM110CQ1W6H9 321 aa13.34□□□□□ -0.27
TARDBP-226ENST00000621790 RILPL1Q5EBL4 403 aa13.34□□□□□ -0.27
TARDBP-226ENST00000621790 CLEC17AQ6ZS10 378 aa13.34□□□□□ -0.27
TARDBP-226ENST00000621790 CLEC4DQ8WXI8 215 aa13.34□□□□□ -0.27
TARDBP-226ENST00000621790 TNFRSF25Q93038 417 aa13.34□□□□□ -0.27
TARDBP-226ENST00000621790 SHISA4Q96DD7 197 aa13.34□□□□□ -0.27
TARDBP-226ENST00000621790 ZNF396Q96N95 335 aaPredicted RBP13.34□□□□□ -0.27
TARDBP-226ENST00000621790 NAP1L4Q99733 375 aaKnown RBP13.34□□□□□ -0.27
TARDBP-226ENST00000621790 GJB4Q9NTQ9 266 aa13.34□□□□□ -0.27
TARDBP-226ENST00000621790 RNF146Q9NTX7 359 aa13.34□□□□□ -0.27
TARDBP-226ENST00000621790 BTBD7Q9P203 1132 aa13.34□□□□□ -0.27
TARDBP-226ENST00000621790 NOL7Q9UMY1 257 aaKnown RBP13.34□□□□□ -0.27
TARDBP-226ENST00000621790 TLR2O60603 784 aa13.33□□□□□ -0.28
TARDBP-226ENST00000621790 CYP2C8P10632 490 aa13.33□□□□□ -0.28
TARDBP-226ENST00000621790 HSD17B4P51659 736 aa13.33□□□□□ -0.28
TARDBP-226ENST00000621790 ORC2Q13416 577 aaPredicted RBP13.33□□□□□ -0.28
TARDBP-226ENST00000621790 CFHR5Q9BXR6 569 aa13.33□□□□□ -0.28
TARDBP-226ENST00000621790 CFAP45Q9UL16 551 aa13.33□□□□□ -0.28
TARDBP-226ENST00000621790 PCDHA6Q9UN73 950 aa13.33□□□□□ -0.28
TARDBP-226ENST00000621790 PCDHA8Q9Y5H6 950 aa13.33□□□□□ -0.28
TARDBP-226ENST00000621790 PFASO15067 1338 aa13.33□□□□□ -0.28
TARDBP-226ENST00000621790 SPDYE3A6NKU9 549 aa13.32□□□□□ -0.28
TARDBP-226ENST00000621790 MEIS2O14770 477 aa13.32□□□□□ -0.28
TARDBP-226ENST00000621790 OPLAHO14841 1288 aa13.32□□□□□ -0.28
TARDBP-226ENST00000621790 STRNO43815 780 aa13.32□□□□□ -0.28
TARDBP-226ENST00000621790 CNMDO75829 334 aa13.32□□□□□ -0.28
TARDBP-226ENST00000621790 BMP15O95972 392 aa13.32□□□□□ -0.28
TARDBP-226ENST00000621790 HSPA6P17066 643 aa13.32□□□□□ -0.28
TARDBP-226ENST00000621790 NONOQ15233 471 aaKnown RBP eCLIP13.32□□□□□ -0.28
TARDBP-226ENST00000621790 POTEEQ6S8J3 1075 aa13.32□□□□□ -0.28
TARDBP-226ENST00000621790 RNF207Q6ZRF8 634 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms