RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 FLRT1Q9NZU1 646 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 CNTNAP5Q8WYK1 1306 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 GOLGA8AA7E2F4 631 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 ADCY3O60266 1144 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 AK2P54819 239 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 RTN1Q16799 776 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 TKFCQ3LXA3 575 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 USH1GQ495M9 461 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 SYNE3Q6ZMZ3 975 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 HOMER1Q86YM7 354 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 TNS4Q8IZW8 715 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 PXYLP1Q8TE99 480 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 SH3TC2Q8TF17 1288 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 APBA2Q99767 749 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 CWC22Q9HCG8 908 aaKnown RBP16.63■□□□□ 0.25
CBWD3-217ENST00000621474 A1CFQ9NQ94 594 aaKnown RBP16.63■□□□□ 0.25
CBWD3-217ENST00000621474 OPLAHO14841 1288 aa16.62■□□□□ 0.25
CBWD3-217ENST00000621474 GRK4P32298 578 aa16.62■□□□□ 0.25
CBWD3-217ENST00000621474 ADD1P35611 737 aaKnown RBP16.62■□□□□ 0.25
CBWD3-217ENST00000621474 RGS2P41220 211 aa16.62■□□□□ 0.25
CBWD3-217ENST00000621474 GNAQP50148 359 aa16.62■□□□□ 0.25
CBWD3-217ENST00000621474 METAP2P50579 478 aaKnown RBP eCLIP16.62■□□□□ 0.25
CBWD3-217ENST00000621474 CCDC82Q8N4S0 544 aa16.62■□□□□ 0.25
CBWD3-217ENST00000621474 FGD4Q96M96 766 aa16.62■□□□□ 0.25
CBWD3-217ENST00000621474 TBC1D32Q96NH3 1257 aa16.62■□□□□ 0.25
CBWD3-217ENST00000621474 LZTS2Q9BRK4 669 aa16.62■□□□□ 0.25
CBWD3-217ENST00000621474 RBM28Q9NW13 759 aaKnown RBP16.62■□□□□ 0.25
CBWD3-217ENST00000621474 FBXO40Q9UH90 709 aa16.62■□□□□ 0.25
CBWD3-217ENST00000621474 TPCN1Q9ULQ1 816 aa16.62■□□□□ 0.25
CBWD3-217ENST00000621474 NEK4P51957 841 aa16.61■□□□□ 0.25
CBWD3-217ENST00000621474 TRIM32Q13049 653 aa16.61■□□□□ 0.25
CBWD3-217ENST00000621474 KCTD2Q14681 263 aa16.61■□□□□ 0.25
CBWD3-217ENST00000621474 NTRK3Q16288 839 aa16.61■□□□□ 0.25
CBWD3-217ENST00000621474 ZNF792Q3KQV3 632 aa16.61■□□□□ 0.25
CBWD3-217ENST00000621474 SLC9C1Q4G0N8 1177 aa16.61■□□□□ 0.25
CBWD3-217ENST00000621474 SLAIN1Q8ND83 568 aa16.61■□□□□ 0.25
CBWD3-217ENST00000621474 PIBF1Q8WXW3 757 aa16.61■□□□□ 0.25
CBWD3-217ENST00000621474 ARMC5Q96C12 935 aa16.61■□□□□ 0.25
CBWD3-217ENST00000621474 ZNF274Q96GC6 653 aaPredicted RBP16.61■□□□□ 0.25
CBWD3-217ENST00000621474 ABHD8Q96I13 439 aa16.61■□□□□ 0.25
CBWD3-217ENST00000621474 NAP1L2Q9ULW6 460 aaPredicted RBP16.61■□□□□ 0.25
CBWD3-217ENST00000621474 KIAA0100Q14667 2235 aaKnown RBP16.61■□□□□ 0.25
CBWD3-217ENST00000621474 ASTN1O14525 1302 aa16.6■□□□□ 0.25
CBWD3-217ENST00000621474 PNMA6FA0A0J9YX94 578 aa16.6■□□□□ 0.25
CBWD3-217ENST00000621474 hCG_1642624A0A1W2PR95 340 aa16.6■□□□□ 0.25
CBWD3-217ENST00000621474 FBXO11Q86XK2 927 aa16.6■□□□□ 0.25
CBWD3-217ENST00000621474 ZNF333Q96JL9 665 aa16.6■□□□□ 0.25
CBWD3-217ENST00000621474 AMNQ9BXJ7 453 aa16.6■□□□□ 0.25
CBWD3-217ENST00000621474 NCOA5Q9HCD5 579 aaKnown RBP16.6■□□□□ 0.25
CBWD3-217ENST00000621474 CYP39A1Q9NYL5 469 aa16.6■□□□□ 0.25
CBWD3-217ENST00000621474 LARGE1O95461 756 aa16.59■□□□□ 0.25
CBWD3-217ENST00000621474 CCT2P78371 535 aaKnown RBP16.59■□□□□ 0.25
CBWD3-217ENST00000621474 DPP9Q86TI2 863 aa16.59■□□□□ 0.25
CBWD3-217ENST00000621474 ANKRD35Q8N283 1001 aa16.59■□□□□ 0.25
CBWD3-217ENST00000621474 MAML3Q96JK9 1138 aa16.59■□□□□ 0.25
CBWD3-217ENST00000621474 PNMA2Q9UL42 364 aa16.59■□□□□ 0.25
CBWD3-217ENST00000621474 ABCB11O95342 1321 aa16.59■□□□□ 0.25
CBWD3-217ENST00000621474 CNTN2Q02246 1040 aa16.59■□□□□ 0.25
CBWD3-217ENST00000621474 PPP2R5BQ15173 497 aa16.59■□□□□ 0.25
CBWD3-217ENST00000621474 SLC30A10Q6XR72 485 aa16.59■□□□□ 0.25
CBWD3-217ENST00000621474 FAM133AQ8N9E0 248 aa16.59■□□□□ 0.25
CBWD3-217ENST00000621474 TBC1D5Q92609 795 aa16.59■□□□□ 0.25
CBWD3-217ENST00000621474 RRP36Q96EU6 259 aaKnown RBP16.59■□□□□ 0.25
CBWD3-217ENST00000621474 PURBQ96QR8 312 aaKnown RBP16.59■□□□□ 0.25
CBWD3-217ENST00000621474 UPF2Q9HAU5 1272 aaKnown RBP16.59■□□□□ 0.25
CBWD3-217ENST00000621474 PCDHA1Q9Y5I3 950 aa16.59■□□□□ 0.25
CBWD3-217ENST00000621474 LRRC37A2A6NM11 1700 aa16.59■□□□□ 0.25
CBWD3-217ENST00000621474 PFASO15067 1338 aa16.58■□□□□ 0.24
CBWD3-217ENST00000621474 HMGCRP04035 888 aa16.58■□□□□ 0.24
CBWD3-217ENST00000621474 INHAP05111 366 aa16.58■□□□□ 0.24
CBWD3-217ENST00000621474 SCRN1Q12765 414 aa16.58■□□□□ 0.24
CBWD3-217ENST00000621474 MAP3K21Q5TCX8 1036 aa16.58■□□□□ 0.24
CBWD3-217ENST00000621474 NSMFQ6X4W1 530 aa16.58■□□□□ 0.24
CBWD3-217ENST00000621474 DDX11Q96FC9 970 aa16.58■□□□□ 0.24
CBWD3-217ENST00000621474 DIS3Q9Y2L1 958 aaKnown RBP16.58■□□□□ 0.24
CBWD3-217ENST00000621474 RPS6P62753 249 aaKnown RBP16.57■□□□□ 0.24
CBWD3-217ENST00000621474 GHRHRQ02643 423 aa16.57■□□□□ 0.24
CBWD3-217ENST00000621474 STK3Q13188 491 aa16.57■□□□□ 0.24
CBWD3-217ENST00000621474 BAATQ14032 418 aaPredicted RBP16.57■□□□□ 0.24
CBWD3-217ENST00000621474 MTFR1Q15390 333 aa16.57■□□□□ 0.24
CBWD3-217ENST00000621474 ME3Q16798 604 aa16.57■□□□□ 0.24
CBWD3-217ENST00000621474 OLFML2BQ68BL8 750 aa16.57■□□□□ 0.24
CBWD3-217ENST00000621474 CCDC196A0A1B0GTZ2 297 aa16.56■□□□□ 0.24
CBWD3-217ENST00000621474 SOWAHBA6NEL2 793 aa16.56■□□□□ 0.24
CBWD3-217ENST00000621474 PPFIA3O75145 1194 aa16.56■□□□□ 0.24
CBWD3-217ENST00000621474 CYP2C19P33261 490 aa16.56■□□□□ 0.24
CBWD3-217ENST00000621474 ST3GAL1Q11201 340 aa16.56■□□□□ 0.24
CBWD3-217ENST00000621474 ANKRD1Q15327 319 aa16.56■□□□□ 0.24
CBWD3-217ENST00000621474 TYW1BQ6NUM6 668 aa16.56■□□□□ 0.24
CBWD3-217ENST00000621474 NOL8Q76FK4 1167 aaKnown RBP16.56■□□□□ 0.24
CBWD3-217ENST00000621474 RGS22Q8NE09 1264 aa16.56■□□□□ 0.24
CBWD3-217ENST00000621474 COL20A1Q9P218 1284 aa16.56■□□□□ 0.24
CBWD3-217ENST00000621474 V9GY48 417 aaPredicted RBP16.56■□□□□ 0.24
CBWD3-217ENST00000621474 FRMPD3Q5JV73 1810 aa16.56■□□□□ 0.24
CBWD3-217ENST00000621474 PFKFB2O60825 505 aa16.56■□□□□ 0.24
CBWD3-217ENST00000621474 IFNAR1P17181 557 aa16.56■□□□□ 0.24
CBWD3-217ENST00000621474 CACNB2Q08289 660 aaPredicted RBP16.56■□□□□ 0.24
CBWD3-217ENST00000621474 PKN1Q16512 942 aa16.56■□□□□ 0.24
CBWD3-217ENST00000621474 RNF207Q6ZRF8 634 aa16.56■□□□□ 0.24
CBWD3-217ENST00000621474 TRMT44Q8IYL2 757 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms