RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 ZNF341Q9BYN7 854 aa14.27□□□□□ -0.12
TNFAIP3-211ENST00000621150 CLIC4Q9Y696 253 aa14.27□□□□□ -0.12
TNFAIP3-211ENST00000621150 MYH6P13533 1939 aa14.27□□□□□ -0.12
TNFAIP3-211ENST00000621150 MYH8P13535 1937 aa14.27□□□□□ -0.12
TNFAIP3-211ENST00000621150 CCL15-CCL14A0A0B4J2E2 113 aa14.26□□□□□ -0.13
TNFAIP3-211ENST00000621150 hCG_1642624A0A1W2PR95 340 aa14.26□□□□□ -0.13
TNFAIP3-211ENST00000621150 SCG2P13521 617 aa14.26□□□□□ -0.13
TNFAIP3-211ENST00000621150 CCL15Q16663 113 aa14.26□□□□□ -0.13
TNFAIP3-211ENST00000621150 CCDC183Q5T5S1 534 aa14.26□□□□□ -0.13
TNFAIP3-211ENST00000621150 ANO1Q5XXA6 986 aa14.26□□□□□ -0.13
TNFAIP3-211ENST00000621150 SYAP1Q96A49 352 aaPredicted RBP14.26□□□□□ -0.13
TNFAIP3-211ENST00000621150 LZTS2Q9BRK4 669 aa14.26□□□□□ -0.13
TNFAIP3-211ENST00000621150 VPS54Q9P1Q0 977 aa14.26□□□□□ -0.13
TNFAIP3-211ENST00000621150 GOLGA6L3A6NEY3 463 aa14.26□□□□□ -0.13
TNFAIP3-211ENST00000621150 TTLL1O95922 423 aa14.26□□□□□ -0.13
TNFAIP3-211ENST00000621150 PDHBP11177 359 aa14.26□□□□□ -0.13
TNFAIP3-211ENST00000621150 INPP5BP32019 993 aa14.26□□□□□ -0.13
TNFAIP3-211ENST00000621150 TOB1P50616 345 aaPredicted RBP14.26□□□□□ -0.13
TNFAIP3-211ENST00000621150 AKAP17AQ02040 695 aaKnown RBP14.26□□□□□ -0.13
TNFAIP3-211ENST00000621150 FBXO46Q6PJ61 603 aaPredicted RBP14.26□□□□□ -0.13
TNFAIP3-211ENST00000621150 FAM177A1Q8N128 213 aaPredicted RBP14.26□□□□□ -0.13
TNFAIP3-211ENST00000621150 MKL1Q969V6 931 aa14.26□□□□□ -0.13
TNFAIP3-211ENST00000621150 TMEM106CQ9BVX2 250 aa14.26□□□□□ -0.13
TNFAIP3-211ENST00000621150 ZNF112Q9UJU3 913 aa14.26□□□□□ -0.13
TNFAIP3-211ENST00000621150 MORC2Q9Y6X9 1032 aaPredicted RBP14.26□□□□□ -0.13
TNFAIP3-211ENST00000621150 A0A1W2PQ27 194 aa14.25□□□□□ -0.13
TNFAIP3-211ENST00000621150 A0A1W2PQ64 194 aa14.25□□□□□ -0.13
TNFAIP3-211ENST00000621150 A0A1W2PQD8 194 aa14.25□□□□□ -0.13
TNFAIP3-211ENST00000621150 FAM196BA6NMK8 535 aa14.25□□□□□ -0.13
TNFAIP3-211ENST00000621150 SOX10P56693 466 aa14.25□□□□□ -0.13
TNFAIP3-211ENST00000621150 CEBPZQ03701 1054 aaKnown RBP14.25□□□□□ -0.13
TNFAIP3-211ENST00000621150 NR5A1Q13285 461 aa14.25□□□□□ -0.13
TNFAIP3-211ENST00000621150 SLC39A14Q15043 492 aa14.25□□□□□ -0.13
TNFAIP3-211ENST00000621150 AXDND1Q5T1B0 1012 aaPredicted RBP14.25□□□□□ -0.13
TNFAIP3-211ENST00000621150 LRSAM1Q6UWE0 723 aa14.25□□□□□ -0.13
TNFAIP3-211ENST00000621150 CLEC10AQ8IUN9 316 aa14.25□□□□□ -0.13
TNFAIP3-211ENST00000621150 SIAH1Q8IUQ4 282 aa14.25□□□□□ -0.13
TNFAIP3-211ENST00000621150 FAM43AQ8N2R8 423 aa14.25□□□□□ -0.13
TNFAIP3-211ENST00000621150 KCNG4Q8TDN1 519 aa14.25□□□□□ -0.13
TNFAIP3-211ENST00000621150 SH3GLB2Q9NR46 395 aa14.25□□□□□ -0.13
TNFAIP3-211ENST00000621150 PCDHA7Q9UN72 937 aa14.25□□□□□ -0.13
TNFAIP3-211ENST00000621150 MKI67P46013 3256 aaKnown RBP14.25□□□□□ -0.13
TNFAIP3-211ENST00000621150 SYCE3A1L190 88 aa14.24□□□□□ -0.13
TNFAIP3-211ENST00000621150 KLRF2D3W0D1 207 aa14.24□□□□□ -0.13
TNFAIP3-211ENST00000621150 XBP1P17861 261 aa14.24□□□□□ -0.13
TNFAIP3-211ENST00000621150 PPATQ06203 517 aa14.24□□□□□ -0.13
TNFAIP3-211ENST00000621150 PPIL2Q13356 520 aa14.24□□□□□ -0.13
TNFAIP3-211ENST00000621150 RRP1BQ14684 758 aaKnown RBP14.24□□□□□ -0.13
TNFAIP3-211ENST00000621150 SAFBQ15424 915 aaKnown RBP eCLIP14.24□□□□□ -0.13
TNFAIP3-211ENST00000621150 SHROOM1Q2M3G4 852 aaPredicted RBP14.24□□□□□ -0.13
TNFAIP3-211ENST00000621150 PPP4R3BQ5MIZ7 849 aa14.24□□□□□ -0.13
TNFAIP3-211ENST00000621150 TYW1BQ6NUM6 668 aa14.24□□□□□ -0.13
TNFAIP3-211ENST00000621150 USP17L2Q6R6M4 530 aa14.24□□□□□ -0.13
TNFAIP3-211ENST00000621150 RBM43Q6ZSC3 357 aaKnown RBP14.24□□□□□ -0.13
TNFAIP3-211ENST00000621150 OTOP1Q7RTM1 612 aa14.24□□□□□ -0.13
TNFAIP3-211ENST00000621150 ENGASEQ8NFI3 743 aa14.24□□□□□ -0.13
TNFAIP3-211ENST00000621150 RIOX1Q9H6W3 641 aa14.24□□□□□ -0.13
TNFAIP3-211ENST00000621150 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.24□□□□□ -0.13
TNFAIP3-211ENST00000621150 NYAP2Q9P242 653 aa14.24□□□□□ -0.13
TNFAIP3-211ENST00000621150 HERC5Q9UII4 1024 aaKnown RBP14.24□□□□□ -0.13
TNFAIP3-211ENST00000621150 USP17L5A8MUK1 530 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 M0R2N6 131 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 PPP6R2O75170 966 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 PARP1P09874 1014 aaKnown RBP14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 CETPP11597 493 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 JAG1P78504 1218 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 SP3Q02447 781 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 MAP3K10Q02779 954 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 SNAPC2Q13487 334 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 SF3A1Q15459 793 aaKnown RBP14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 TAF1CQ15572 869 aaPredicted RBP14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 CERKLQ49MI3 558 aaPredicted RBP14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 TMEM259Q4ZIN3 620 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 EARS2Q5JPH6 523 aaKnown RBP14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 ADALQ6DHV7 355 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 SND1Q7KZF4 910 aaKnown RBP eCLIP14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 CD99L2Q8TCZ2 262 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 ERO1AQ96HE7 468 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 FUCA2Q9BTY2 467 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 TRIM17Q9Y577 477 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 IVNS1ABPQ9Y6Y0 642 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 SPTLC2O15270 562 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 GOLGA8HP0CJ92 632 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 XRCC6P12956 609 aaKnown RBP eCLIP14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 KRT2P35908 639 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 MRE11P49959 708 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 CAP1Q01518 475 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 SNW1Q13573 536 aaKnown RBP14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 ASPRV1Q53RT3 343 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 RILPL1Q5EBL4 403 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 L1TD1Q5T7N2 865 aaKnown RBP14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 TMEM179Q6ZVK1 233 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 ZSCAN29Q8IWY8 852 aaPredicted RBP14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 LRRC47Q8N1G4 583 aaKnown RBP14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 GOLPH3LQ9H4A5 285 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 KANSL2Q9H9L4 492 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 ZFYVE28Q9HCC9 887 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 CLIP2Q9UDT6 1046 aa14.23□□□□□ -0.13
TNFAIP3-211ENST00000621150 PHIPQ8WWQ0 1821 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms