RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 TEKT1Q969V4 418 aa5.51□□□□□ -1.53
VPS13D-214ENST00000620676 DAPK1P53355 1430 aa5.51□□□□□ -1.53
VPS13D-214ENST00000620676 A0A0U1RQJ8 604 aa5.51□□□□□ -1.53
VPS13D-214ENST00000620676 PCP4L1A6NKN8 68 aa5.51□□□□□ -1.53
VPS13D-214ENST00000620676 HNRNPRO43390 633 aaKnown RBP5.51□□□□□ -1.53
VPS13D-214ENST00000620676 PYGLP06737 847 aa5.51□□□□□ -1.53
VPS13D-214ENST00000620676 KLC1Q07866 573 aa5.51□□□□□ -1.53
VPS13D-214ENST00000620676 PTGISQ16647 500 aa5.51□□□□□ -1.53
VPS13D-214ENST00000620676 ZNF589Q86UQ0 364 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-214ENST00000620676 MKNK2Q9HBH9 465 aa5.51□□□□□ -1.53
VPS13D-214ENST00000620676 FBXL5Q9UKA1 691 aa5.51□□□□□ -1.53
VPS13D-214ENST00000620676 TRIM33Q9UPN9 1127 aa5.51□□□□□ -1.53
VPS13D-214ENST00000620676 NCF2P19878 526 aaPredicted RBP5.5□□□□□ -1.53
VPS13D-214ENST00000620676 TNFAIP3P21580 790 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 KAZNQ674X7 775 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 TBC1D22AQ8WUA7 517 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 UTP6Q9NYH9 597 aaKnown RBP5.5□□□□□ -1.53
VPS13D-214ENST00000620676 RTEL1Q9NZ71 1219 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 OPLAHO14841 1288 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 ANO5Q75V66 913 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 NANOGNBQ7Z5D8 188 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 DCLK2Q8N568 766 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 OSBPL5Q9H0X9 879 aaPredicted RBP5.5□□□□□ -1.53
VPS13D-214ENST00000620676 LARSQ9P2J5 1176 aaKnown RBP5.5□□□□□ -1.53
VPS13D-214ENST00000620676 PAPOLAP51003 745 aaKnown RBP5.5□□□□□ -1.53
VPS13D-214ENST00000620676 SMTNP53814 917 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 SEL1L2Q5TEA6 688 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 ZC4H2Q9NQZ6 224 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 GIMAP4Q9NUV9 329 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 C2CD2Q9Y426 696 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 EIF3DO15371 548 aaKnown RBP eCLIP5.5□□□□□ -1.53
VPS13D-214ENST00000620676 SEC24DO94855 1032 aaPredicted RBP5.5□□□□□ -1.53
VPS13D-214ENST00000620676 EZH2Q15910 746 aaKnown RBP5.5□□□□□ -1.53
VPS13D-214ENST00000620676 PPP1R36Q96LQ0 422 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 TTLL13PA6NNM8 815 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 WDR46O15213 610 aaKnown RBP5.5□□□□□ -1.53
VPS13D-214ENST00000620676 RASA3Q14644 834 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 TMEM266Q2M3C6 531 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 RGS9BPQ6ZS82 235 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 BHMT2Q9H2M3 363 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 TRAF3IP3Q9Y228 551 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 CFAP69A5D8W1 941 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 IFNB1P01574 187 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 POTEJP0CG39 1038 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 ZFXP17010 805 aaPredicted RBP5.5□□□□□ -1.53
VPS13D-214ENST00000620676 ATP1A4Q13733 1029 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 ARHGAP44Q17R89 818 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 Q4G0T1 1027 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 CHMP6Q96FZ7 201 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 CFAP36Q96G28 342 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 CSRNP2Q9H175 543 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 SNX24Q9Y343 169 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 RASGRF2O14827 1237 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 GYS1P13807 737 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 ADD1P35611 737 aaKnown RBP5.5□□□□□ -1.53
VPS13D-214ENST00000620676 DDIT3P35638 169 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 SOX11P35716 441 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 RFC5P40937 340 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 EPHB4P54760 987 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 TMEM110Q86TL2 294 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 DAAM1Q9Y4D1 1078 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 PDE6AP16499 860 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 PPP2R2AP63151 447 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 RGL1Q9NZL6 768 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 LRRC41Q15345 812 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 DTHD1Q6ZMT9 781 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 HELBQ8NG08 1087 aaPredicted RBP5.5□□□□□ -1.53
VPS13D-214ENST00000620676 COG1Q8WTW3 980 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 ATP6V1G3Q96LB4 118 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 ANGPTL2Q9UKU9 493 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 CDHR2Q9BYE9 1310 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 NUGGCQ68CJ6 796 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 TRIM42Q8IWZ5 723 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 SLC39A2Q9NP94 309 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 EHD2Q9NZN4 543 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 DDX20Q9UHI6 824 aaKnown RBP5.5□□□□□ -1.53
VPS13D-214ENST00000620676 ECEL1O95672 775 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 FERP16591 822 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 ATP4AP20648 1035 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 TGS1Q96RS0 853 aaKnown RBP5.5□□□□□ -1.53
VPS13D-214ENST00000620676 IFT122Q9HBG6 1241 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 XPO1O14980 1071 aaKnown RBP5.5□□□□□ -1.53
VPS13D-214ENST00000620676 PDE6CP51160 858 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 TIMM10P62072 90 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 LETM2Q2VYF4 491 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 NSUN7Q8NE18 718 aaKnown RBP5.5□□□□□ -1.53
VPS13D-214ENST00000620676 MKNK1Q9BUB5 465 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 GOLGA8SH3BPF8 625 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 GOLGA8MH3BSY2 632 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 MFAP3LO75121 409 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 CCDC15Q0P6D6 951 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 SLC9C1Q4G0N8 1177 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 SPATA1Q5VX52 437 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 MAGEB6Q8N7X4 407 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 DACT3Q96B18 629 aaPredicted RBP5.5□□□□□ -1.53
VPS13D-214ENST00000620676 OLFML3Q9NRN5 406 aa5.5□□□□□ -1.53
VPS13D-214ENST00000620676 TIAM1Q13009 1591 aa5.49□□□□□ -1.53
VPS13D-214ENST00000620676 PRG4Q92954 1404 aaPredicted RBP5.49□□□□□ -1.53
VPS13D-214ENST00000620676 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.49□□□□□ -1.53
VPS13D-214ENST00000620676 GYG2O15488 501 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms