RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 C2orf54Q08AI8 447 aa9.2□□□□□ -0.94
ALMS1-208ENST00000620466 RASGRF1Q13972 1273 aa9.2□□□□□ -0.94
ALMS1-208ENST00000620466 LRRC47Q8N1G4 583 aaKnown RBP9.2□□□□□ -0.94
ALMS1-208ENST00000620466 EEF2KMTQ96G04 330 aa9.2□□□□□ -0.94
ALMS1-208ENST00000620466 DDX25Q9UHL0 483 aaKnown RBP9.2□□□□□ -0.94
ALMS1-208ENST00000620466 CYP2D7A0A087X1C5 515 aa9.2□□□□□ -0.94
ALMS1-208ENST00000620466 CYP27B1O15528 508 aa9.2□□□□□ -0.94
ALMS1-208ENST00000620466 ACTN4O43707 911 aaKnown RBP9.2□□□□□ -0.94
ALMS1-208ENST00000620466 BIRC3Q13489 604 aa9.2□□□□□ -0.94
ALMS1-208ENST00000620466 MTMR3Q13615 1198 aa9.2□□□□□ -0.94
ALMS1-208ENST00000620466 DPP8Q6V1X1 898 aaPredicted RBP9.2□□□□□ -0.94
ALMS1-208ENST00000620466 RUFY4Q6ZNE9 571 aa9.2□□□□□ -0.94
ALMS1-208ENST00000620466 CCT6BQ92526 530 aa9.2□□□□□ -0.94
ALMS1-208ENST00000620466 OSBPL5Q9H0X9 879 aaPredicted RBP9.2□□□□□ -0.94
ALMS1-208ENST00000620466 FAM204AQ9H8W3 233 aa9.2□□□□□ -0.94
ALMS1-208ENST00000620466 DDX41Q9UJV9 622 aaKnown RBP9.2□□□□□ -0.94
ALMS1-208ENST00000620466 PALLDQ8WX93 1383 aa9.2□□□□□ -0.94
ALMS1-208ENST00000620466 KCNK3O14649 394 aa9.2□□□□□ -0.94
ALMS1-208ENST00000620466 EEF1GP26641 437 aaKnown RBP9.2□□□□□ -0.94
ALMS1-208ENST00000620466 IL6STP40189 918 aaPredicted RBP9.2□□□□□ -0.94
ALMS1-208ENST00000620466 NAA30Q147X3 362 aaPredicted RBP9.2□□□□□ -0.94
ALMS1-208ENST00000620466 KMT5BQ4FZB7 885 aa9.2□□□□□ -0.94
ALMS1-208ENST00000620466 U2AF1L4Q8WU68 220 aaKnown RBP9.2□□□□□ -0.94
ALMS1-208ENST00000620466 CAPS2Q9BXY5 557 aa9.2□□□□□ -0.94
ALMS1-208ENST00000620466 MAGEF1Q9HAY2 307 aa9.2□□□□□ -0.94
ALMS1-208ENST00000620466 ATP8A2Q9NTI2 1148 aa9.2□□□□□ -0.94
ALMS1-208ENST00000620466 CTTNBP2NLQ9P2B4 639 aa9.2□□□□□ -0.94
ALMS1-208ENST00000620466 GABPAQ06546 454 aa9.2□□□□□ -0.94
ALMS1-208ENST00000620466 UAP1Q16222 522 aaPredicted RBP9.2□□□□□ -0.94
ALMS1-208ENST00000620466 PTPROQ16827 1216 aa9.2□□□□□ -0.94
ALMS1-208ENST00000620466 TTLL11Q8NHH1 800 aa9.2□□□□□ -0.94
ALMS1-208ENST00000620466 SMC6Q96SB8 1091 aa9.2□□□□□ -0.94
ALMS1-208ENST00000620466 STRBPQ96SI9 672 aaKnown RBP9.2□□□□□ -0.94
ALMS1-208ENST00000620466 LAD1O00515 517 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 NOP56O00567 594 aaKnown RBP9.19□□□□□ -0.94
ALMS1-208ENST00000620466 PLEKHA8P1O95397 391 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 CDC27P30260 824 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 RASSF7Q02833 373 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 FAM98CQ17RN3 349 aaKnown RBP9.19□□□□□ -0.94
ALMS1-208ENST00000620466 PPP1R21Q6ZMI0 780 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 P2RX5Q93086 422 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 KIFC2Q96AC6 838 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 WDR19Q8NEZ3 1342 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 ARHGEF35A5YM69 484 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 ATP5DP30049 168 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 ERFEQ4G0M1 354 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 TCP11X2Q5H9J9 407 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 CDAN1Q8IWY9 1227 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 DHTKD1Q96HY7 919 aaPredicted RBP9.19□□□□□ -0.94
ALMS1-208ENST00000620466 IFT74Q96LB3 600 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 FAN1Q9Y2M0 1017 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 STK36Q9NRP7 1315 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 ZMYND10O75800 440 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 PNMA6AP0CW24 399 aaPredicted RBP9.19□□□□□ -0.94
ALMS1-208ENST00000620466 SMTNP53814 917 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 ZBTB16Q05516 673 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 GBP6Q6ZN66 633 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 LY9Q9HBG7 655 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 VWDEQ8N2E2 1590 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 MFAP3LO75121 409 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 SLC8A3P57103 927 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 TCP10Q12799 353 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 TTC19Q6DKK2 380 aaPredicted RBP9.19□□□□□ -0.94
ALMS1-208ENST00000620466 STAG1Q8WVM7 1258 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 TRIM6Q9C030 488 aaPredicted RBP9.19□□□□□ -0.94
ALMS1-208ENST00000620466 DAPK3O43293 454 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 TCP1P17987 556 aaKnown RBP9.19□□□□□ -0.94
ALMS1-208ENST00000620466 TRPC3Q13507 836 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 HLFQ16534 295 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 CUEDC2Q9H467 287 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 THAP9Q9H5L6 903 aa9.19□□□□□ -0.94
ALMS1-208ENST00000620466 ZNF804BA4D1E1 1349 aa9.18□□□□□ -0.94
ALMS1-208ENST00000620466 CDC25AP30304 524 aa9.18□□□□□ -0.94
ALMS1-208ENST00000620466 ARHGAP25P42331 645 aa9.18□□□□□ -0.94
ALMS1-208ENST00000620466 ATP1A2P50993 1020 aa9.18□□□□□ -0.94
ALMS1-208ENST00000620466 EXOSC10Q01780 885 aaKnown RBP9.18□□□□□ -0.94
ALMS1-208ENST00000620466 ARHGAP44Q17R89 818 aa9.18□□□□□ -0.94
ALMS1-208ENST00000620466 SPOUT1Q5T280 376 aaKnown RBP9.18□□□□□ -0.94
ALMS1-208ENST00000620466 ARMCX5Q6P1M9 558 aa9.18□□□□□ -0.94
ALMS1-208ENST00000620466 PSTPIP2Q9H939 334 aa9.18□□□□□ -0.94
ALMS1-208ENST00000620466 NHEJ1Q9H9Q4 299 aaPredicted RBP9.18□□□□□ -0.94
ALMS1-208ENST00000620466 CCDC160A6NGH7 325 aa9.18□□□□□ -0.94
ALMS1-208ENST00000620466 CHGBP05060 677 aa9.18□□□□□ -0.94
ALMS1-208ENST00000620466 PRKG1Q13976 671 aa9.18□□□□□ -0.94
ALMS1-208ENST00000620466 KRT31Q15323 416 aa9.18□□□□□ -0.94
ALMS1-208ENST00000620466 CEP85LQ5SZL2 805 aa9.18□□□□□ -0.94
ALMS1-208ENST00000620466 SMC1BQ8NDV3 1235 aa9.18□□□□□ -0.94
ALMS1-208ENST00000620466 PLCB1Q9NQ66 1216 aa9.18□□□□□ -0.94
ALMS1-208ENST00000620466 AMFRQ9UKV5 643 aa9.18□□□□□ -0.94
ALMS1-208ENST00000620466 PTPRUQ92729 1446 aa9.18□□□□□ -0.94
ALMS1-208ENST00000620466 CTNNA1P35221 906 aaKnown RBP9.18□□□□□ -0.94
ALMS1-208ENST00000620466 PPANQ9NQ55 473 aaKnown RBP9.18□□□□□ -0.94
ALMS1-208ENST00000620466 USP40Q9NVE5 1235 aa9.18□□□□□ -0.94
ALMS1-208ENST00000620466 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.18□□□□□ -0.94
ALMS1-208ENST00000620466 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.18□□□□□ -0.94
ALMS1-208ENST00000620466 H0YIN7 160 aa9.18□□□□□ -0.94
ALMS1-208ENST00000620466 SEMA3EO15041 775 aa9.18□□□□□ -0.94
ALMS1-208ENST00000620466 RNF40O75150 1001 aa9.18□□□□□ -0.94
ALMS1-208ENST00000620466 MOCS3O95396 460 aa9.18□□□□□ -0.94
ALMS1-208ENST00000620466 MFSD14BQ5SR56 506 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms