RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 VPS54Q9P1Q0 977 aa9.24□□□□□ -0.93
CPNE3-209ENST00000620393 PNMA2Q9UL42 364 aa9.24□□□□□ -0.93
CPNE3-209ENST00000620393 KCNJ14Q9UNX9 436 aa9.24□□□□□ -0.93
CPNE3-209ENST00000620393 PCDHA1Q9Y5I3 950 aa9.24□□□□□ -0.93
CPNE3-209ENST00000620393 MYPNQ86TC9 1320 aa9.24□□□□□ -0.93
CPNE3-209ENST00000620393 PAPPA2Q9BXP8 1791 aa9.23□□□□□ -0.93
CPNE3-209ENST00000620393 CCL15-CCL14A0A0B4J2E2 113 aa9.23□□□□□ -0.93
CPNE3-209ENST00000620393 ESYT2A0FGR8 921 aa9.23□□□□□ -0.93
CPNE3-209ENST00000620393 SMCO2A6NFE2 343 aa9.23□□□□□ -0.93
CPNE3-209ENST00000620393 F13A1P00488 732 aa9.23□□□□□ -0.93
CPNE3-209ENST00000620393 MMP1P03956 469 aa9.23□□□□□ -0.93
CPNE3-209ENST00000620393 CALML3P27482 149 aa9.23□□□□□ -0.93
CPNE3-209ENST00000620393 GNA11P29992 359 aa9.23□□□□□ -0.93
CPNE3-209ENST00000620393 NAPAP54920 295 aa9.23□□□□□ -0.93
CPNE3-209ENST00000620393 INHBEP58166 350 aa9.23□□□□□ -0.93
CPNE3-209ENST00000620393 CCL15Q16663 113 aa9.23□□□□□ -0.93
CPNE3-209ENST00000620393 FOXD4L5Q5VV16 416 aaPredicted RBP9.23□□□□□ -0.93
CPNE3-209ENST00000620393 MCTP1Q6DN14 999 aa9.23□□□□□ -0.93
CPNE3-209ENST00000620393 TYW1BQ6NUM6 668 aa9.23□□□□□ -0.93
CPNE3-209ENST00000620393 CCDC174Q6PII3 467 aa9.23□□□□□ -0.93
CPNE3-209ENST00000620393 ANKRD23Q86SG2 305 aa9.23□□□□□ -0.93
CPNE3-209ENST00000620393 CCDC148Q8NFR7 591 aa9.23□□□□□ -0.93
CPNE3-209ENST00000620393 FOXD4L4Q8WXT5 416 aaPredicted RBP9.23□□□□□ -0.93
CPNE3-209ENST00000620393 BRI3BPQ8WY22 251 aa9.23□□□□□ -0.93
CPNE3-209ENST00000620393 GPKOWQ92917 476 aaPredicted RBP eCLIP9.23□□□□□ -0.93
CPNE3-209ENST00000620393 ATG4CQ96DT6 458 aa9.23□□□□□ -0.93
CPNE3-209ENST00000620393 ZMYND12Q9H0C1 365 aa9.23□□□□□ -0.93
CPNE3-209ENST00000620393 C6orf50Q9HD87 102 aa9.23□□□□□ -0.93
CPNE3-209ENST00000620393 ABT1Q9ULW3 272 aaKnown RBP9.23□□□□□ -0.93
CPNE3-209ENST00000620393 PCDHA4Q9UN74 947 aa9.23□□□□□ -0.93
CPNE3-209ENST00000620393 SLC45A1Q9Y2W3 748 aa9.23□□□□□ -0.93
CPNE3-209ENST00000620393 CTDP1Q9Y5B0 961 aaPredicted RBP9.23□□□□□ -0.93
CPNE3-209ENST00000620393 MANSC4A6NHS7 340 aaPredicted RBP9.22□□□□□ -0.93
CPNE3-209ENST00000620393 SPDYE16A6NNV3 312 aaPredicted RBP9.22□□□□□ -0.93
CPNE3-209ENST00000620393 FAM155AB1AL88 458 aaPredicted RBP9.22□□□□□ -0.93
CPNE3-209ENST00000620393 BTBD18B2RXH4 712 aa9.22□□□□□ -0.93
CPNE3-209ENST00000620393 BTBD19C9JJ37 291 aa9.22□□□□□ -0.93
CPNE3-209ENST00000620393 ATP2A1O14983 1001 aa9.22□□□□□ -0.93
CPNE3-209ENST00000620393 ICAM1P05362 532 aa9.22□□□□□ -0.93
CPNE3-209ENST00000620393 SLC10A3P09131 477 aa9.22□□□□□ -0.93
CPNE3-209ENST00000620393 U2AF2P26368 475 aaKnown RBP eCLIP9.22□□□□□ -0.93
CPNE3-209ENST00000620393 APLP1P51693 650 aa9.22□□□□□ -0.93
CPNE3-209ENST00000620393 MRPL12P52815 198 aaKnown RBP9.22□□□□□ -0.93
CPNE3-209ENST00000620393 OAZ1P54368 228 aa9.22□□□□□ -0.93
CPNE3-209ENST00000620393 IRX3P78415 501 aaPredicted RBP9.22□□□□□ -0.93
CPNE3-209ENST00000620393 KIF23Q02241 960 aaPredicted RBP9.22□□□□□ -0.93
CPNE3-209ENST00000620393 RESTQ13127 1097 aa9.22□□□□□ -0.93
CPNE3-209ENST00000620393 NPY5RQ15761 445 aa9.22□□□□□ -0.93
CPNE3-209ENST00000620393 PPP1R18Q6NYC8 613 aa9.22□□□□□ -0.93
CPNE3-209ENST00000620393 LBX2Q6XYB7 198 aa9.22□□□□□ -0.93
CPNE3-209ENST00000620393 FERMT3Q86UX7 667 aa9.22□□□□□ -0.93
CPNE3-209ENST00000620393 TEX2Q8IWB9 1127 aa9.22□□□□□ -0.93
CPNE3-209ENST00000620393 DIS3L2Q8IYB7 885 aaKnown RBP9.22□□□□□ -0.93
CPNE3-209ENST00000620393 BLIDQ8IZY5 108 aa9.22□□□□□ -0.93
CPNE3-209ENST00000620393 MB21D1Q8N884 522 aa9.22□□□□□ -0.93
CPNE3-209ENST00000620393 DAGLBQ8NCG7 672 aa9.22□□□□□ -0.93
CPNE3-209ENST00000620393 REPS2Q8NFH8 660 aa9.22□□□□□ -0.93
CPNE3-209ENST00000620393 TNPO1Q92973 898 aaKnown RBP9.22□□□□□ -0.93
CPNE3-209ENST00000620393 AGBL1Q96MI9 1066 aa9.22□□□□□ -0.93
CPNE3-209ENST00000620393 PTPN18Q99952 460 aa9.22□□□□□ -0.93
CPNE3-209ENST00000620393 GLT8D2Q9H1C3 349 aa9.22□□□□□ -0.93
CPNE3-209ENST00000620393 ASCC2Q9H1I8 757 aaPredicted RBP9.22□□□□□ -0.93
CPNE3-209ENST00000620393 FOXP1Q9H334 677 aaPredicted RBP9.22□□□□□ -0.93
CPNE3-209ENST00000620393 PSTPIP2Q9H939 334 aa9.22□□□□□ -0.93
CPNE3-209ENST00000620393 MRPL11Q9Y3B7 192 aaKnown RBP9.22□□□□□ -0.93
CPNE3-209ENST00000620393 ZNF536O15090 1300 aa9.22□□□□□ -0.93
CPNE3-209ENST00000620393 PDHXO00330 501 aa9.21□□□□□ -0.94
CPNE3-209ENST00000620393 SNPHO15079 494 aa9.21□□□□□ -0.94
CPNE3-209ENST00000620393 KRT2P35908 639 aa9.21□□□□□ -0.94
CPNE3-209ENST00000620393 STAT3P40763 770 aa9.21□□□□□ -0.94
CPNE3-209ENST00000620393 HERVK_113P62684 666 aa9.21□□□□□ -0.94
CPNE3-209ENST00000620393 TMEM132BQ14DG7 1078 aa9.21□□□□□ -0.94
CPNE3-209ENST00000620393 DEFB115Q30KQ5 88 aa9.21□□□□□ -0.94
CPNE3-209ENST00000620393 USH1GQ495M9 461 aa9.21□□□□□ -0.94
CPNE3-209ENST00000620393 POTEEQ6S8J3 1075 aa9.21□□□□□ -0.94
CPNE3-209ENST00000620393 BRAPQ7Z569 592 aa9.21□□□□□ -0.94
CPNE3-209ENST00000620393 CPXCR1Q8N123 301 aa9.21□□□□□ -0.94
CPNE3-209ENST00000620393 BICD2Q8TD16 824 aa9.21□□□□□ -0.94
CPNE3-209ENST00000620393 OXER1Q8TDS5 423 aa9.21□□□□□ -0.94
CPNE3-209ENST00000620393 RAVER2Q9HCJ3 691 aaKnown RBP9.21□□□□□ -0.94
CPNE3-209ENST00000620393 BRMS1Q9HCU9 246 aa9.21□□□□□ -0.94
CPNE3-209ENST00000620393 RIC8AQ9NPQ8 531 aa9.21□□□□□ -0.94
CPNE3-209ENST00000620393 PNMA3Q9UL41 463 aa9.21□□□□□ -0.94
CPNE3-209ENST00000620393 CCPG1Q9ULG6 757 aa9.21□□□□□ -0.94
CPNE3-209ENST00000620393 ATP6V1DQ9Y5K8 247 aa9.21□□□□□ -0.94
CPNE3-209ENST00000620393 ABCB11O95342 1321 aa9.21□□□□□ -0.94
CPNE3-209ENST00000620393 DOCK1Q14185 1865 aa9.2□□□□□ -0.94
CPNE3-209ENST00000620393 RASSF10A6NK89 507 aa9.2□□□□□ -0.94
CPNE3-209ENST00000620393 KIF28PB7ZC32 967 aa9.2□□□□□ -0.94
CPNE3-209ENST00000620393 M0R2N6 131 aa9.2□□□□□ -0.94
CPNE3-209ENST00000620393 ADAMTS3O15072 1205 aa9.2□□□□□ -0.94
CPNE3-209ENST00000620393 TM4SF4P48230 202 aa9.2□□□□□ -0.94
CPNE3-209ENST00000620393 ADCY7P51828 1080 aa9.2□□□□□ -0.94
CPNE3-209ENST00000620393 NR5A1Q13285 461 aa9.2□□□□□ -0.94
CPNE3-209ENST00000620393 GNL2Q13823 731 aaKnown RBP9.2□□□□□ -0.94
CPNE3-209ENST00000620393 TKFCQ3LXA3 575 aa9.2□□□□□ -0.94
CPNE3-209ENST00000620393 CLEC17AQ6ZS10 378 aa9.2□□□□□ -0.94
CPNE3-209ENST00000620393 NOSTRINQ8IVI9 506 aa9.2□□□□□ -0.94
CPNE3-209ENST00000620393 FAM43AQ8N2R8 423 aa9.2□□□□□ -0.94
CPNE3-209ENST00000620393 SAMD3Q8N6K7 520 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms