RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 IFNKQ9P0W0 207 aa22.83■■□□□ 1.25
MMP28-207ENST00000619655 PCDHA1Q9Y5I3 950 aa22.83■■□□□ 1.25
MMP28-207ENST00000619655 PPP1R18Q6NYC8 613 aa22.82■■□□□ 1.24
MMP28-207ENST00000619655 C17orf53Q8N3J3 647 aaPredicted RBP22.82■■□□□ 1.24
MMP28-207ENST00000619655 GMCL1P1Q8NEA9 526 aa22.82■■□□□ 1.24
MMP28-207ENST00000619655 MTMR8Q96EF0 704 aa22.82■■□□□ 1.24
MMP28-207ENST00000619655 ARFGEF1Q9Y6D6 1849 aa22.82■■□□□ 1.24
MMP28-207ENST00000619655 ZNF500O60304 480 aaPredicted RBP22.82■■□□□ 1.24
MMP28-207ENST00000619655 RASSF7Q02833 373 aa22.82■■□□□ 1.24
MMP28-207ENST00000619655 DPYDQ12882 1025 aa22.82■■□□□ 1.24
MMP28-207ENST00000619655 CCDC144BQ3MJ40 725 aa22.82■■□□□ 1.24
MMP28-207ENST00000619655 PDXDC2PQ6P474 469 aa22.82■■□□□ 1.24
MMP28-207ENST00000619655 TRMT44Q8IYL2 757 aaKnown RBP22.82■■□□□ 1.24
MMP28-207ENST00000619655 SPATA20Q8TB22 786 aa22.82■■□□□ 1.24
MMP28-207ENST00000619655 TDP2O95551 362 aa22.81■■□□□ 1.24
MMP28-207ENST00000619655 CDC25BP30305 580 aa22.81■■□□□ 1.24
MMP28-207ENST00000619655 TECP42680 631 aa22.81■■□□□ 1.24
MMP28-207ENST00000619655 USH1GQ495M9 461 aa22.81■■□□□ 1.24
MMP28-207ENST00000619655 FILIP1Q7Z7B0 1213 aa22.81■■□□□ 1.24
MMP28-207ENST00000619655 XPO4Q9C0E2 1151 aaKnown RBP22.81■■□□□ 1.24
MMP28-207ENST00000619655 HSD3B7Q9H2F3 369 aa22.81■■□□□ 1.24
MMP28-207ENST00000619655 DISC1Q9NRI5 854 aa22.81■■□□□ 1.24
MMP28-207ENST00000619655 EGFRP00533 1210 aa22.81■■□□□ 1.24
MMP28-207ENST00000619655 TPM3P06753 285 aa22.81■■□□□ 1.24
MMP28-207ENST00000619655 BMP3P12645 472 aa22.81■■□□□ 1.24
MMP28-207ENST00000619655 PRPHP41219 470 aa22.81■■□□□ 1.24
MMP28-207ENST00000619655 MRPL12P52815 198 aaKnown RBP22.81■■□□□ 1.24
MMP28-207ENST00000619655 ZYXQ15942 572 aaKnown RBP22.81■■□□□ 1.24
MMP28-207ENST00000619655 SMYD4Q8IYR2 804 aaPredicted RBP22.81■■□□□ 1.24
MMP28-207ENST00000619655 TRIML1Q8N9V2 468 aa22.81■■□□□ 1.24
MMP28-207ENST00000619655 ACER1Q8TDN7 264 aa22.81■■□□□ 1.24
MMP28-207ENST00000619655 PYM1Q9BRP8 204 aaKnown RBP22.81■■□□□ 1.24
MMP28-207ENST00000619655 FANCLQ9NW38 375 aa22.81■■□□□ 1.24
MMP28-207ENST00000619655 USP17L15C9J2P7 530 aa22.8■■□□□ 1.24
MMP28-207ENST00000619655 USP17L13C9JLJ4 530 aa22.8■■□□□ 1.24
MMP28-207ENST00000619655 USP17L11C9JVI0 530 aa22.8■■□□□ 1.24
MMP28-207ENST00000619655 USP17L18D6R9N7 530 aa22.8■■□□□ 1.24
MMP28-207ENST00000619655 USP17L22D6RA61 530 aa22.8■■□□□ 1.24
MMP28-207ENST00000619655 USP17L17D6RBQ6 530 aa22.8■■□□□ 1.24
MMP28-207ENST00000619655 USP17L19D6RCP7 530 aa22.8■■□□□ 1.24
MMP28-207ENST00000619655 USP17L20D6RJB6 530 aa22.8■■□□□ 1.24
MMP28-207ENST00000619655 TXKP42681 527 aa22.8■■□□□ 1.24
MMP28-207ENST00000619655 FMR1Q06787 632 aaKnown RBP eCLIP22.8■■□□□ 1.24
MMP28-207ENST00000619655 USP17L24Q0WX57 530 aa22.8■■□□□ 1.24
MMP28-207ENST00000619655 CUL4BQ13620 913 aa22.8■■□□□ 1.24
MMP28-207ENST00000619655 USP17L6PQ6QN14 398 aa22.8■■□□□ 1.24
MMP28-207ENST00000619655 MLKLQ8NB16 471 aa22.8■■□□□ 1.24
MMP28-207ENST00000619655 MTMR14Q8NCE2 650 aa22.8■■□□□ 1.24
MMP28-207ENST00000619655 GMCL1Q96IK5 515 aa22.8■■□□□ 1.24
MMP28-207ENST00000619655 MTRQ99707 1265 aa22.8■■□□□ 1.24
MMP28-207ENST00000619655 ARHGEF10LQ9HCE6 1279 aa22.8■■□□□ 1.24
MMP28-207ENST00000619655 DACH1Q9UI36 760 aa22.8■■□□□ 1.24
MMP28-207ENST00000619655 ZBTB21Q9ULJ3 1066 aa22.8■■□□□ 1.24
MMP28-207ENST00000619655 SLC37A4O43826 429 aa22.8■■□□□ 1.24
MMP28-207ENST00000619655 TAL1P17542 331 aaPredicted RBP22.8■■□□□ 1.24
MMP28-207ENST00000619655 LRMPQ12912 555 aa22.8■■□□□ 1.24
MMP28-207ENST00000619655 TNIP1Q15025 636 aa22.8■■□□□ 1.24
MMP28-207ENST00000619655 RRAGBQ5VZM2 374 aa22.8■■□□□ 1.24
MMP28-207ENST00000619655 KLHL10Q6JEL2 608 aa22.8■■□□□ 1.24
MMP28-207ENST00000619655 GJA3Q9Y6H8 435 aa22.8■■□□□ 1.24
MMP28-207ENST00000619655 CALCRLQ16602 461 aa22.79■■□□□ 1.24
MMP28-207ENST00000619655 SYDE2Q5VT97 1194 aa22.79■■□□□ 1.24
MMP28-207ENST00000619655 PYCARDQ9ULZ3 195 aa22.79■■□□□ 1.24
MMP28-207ENST00000619655 SERPINC1P01008 464 aa22.78■■□□□ 1.24
MMP28-207ENST00000619655 CLK2P49760 499 aaKnown RBP22.78■■□□□ 1.24
MMP28-207ENST00000619655 FANCCQ00597 558 aa22.78■■□□□ 1.24
MMP28-207ENST00000619655 SAMD1Q6SPF0 538 aaPredicted RBP22.78■■□□□ 1.24
MMP28-207ENST00000619655 GSDMAQ96QA5 445 aa22.78■■□□□ 1.24
MMP28-207ENST00000619655 KIAA1755Q5JYT7 1200 aa22.77■■□□□ 1.24
MMP28-207ENST00000619655 FKBP1CQ5VVH2 108 aa22.77■■□□□ 1.24
MMP28-207ENST00000619655 CCDC84Q86UT8 332 aaPredicted RBP22.77■■□□□ 1.24
MMP28-207ENST00000619655 FAM83AQ86UY5 434 aa22.77■■□□□ 1.24
MMP28-207ENST00000619655 CABP7Q86V35 215 aa22.77■■□□□ 1.24
MMP28-207ENST00000619655 ZBED3Q96IU2 234 aaPredicted RBP22.77■■□□□ 1.24
MMP28-207ENST00000619655 NFE2L3Q9Y4A8 694 aa22.77■■□□□ 1.24
MMP28-207ENST00000619655 EDIL3O43854 480 aa22.76■■□□□ 1.23
MMP28-207ENST00000619655 ARID5BQ14865 1188 aa22.76■■□□□ 1.23
MMP28-207ENST00000619655 NAALADL2Q58DX5 795 aa22.76■■□□□ 1.23
MMP28-207ENST00000619655 UIMC1Q96RL1 719 aa22.76■■□□□ 1.23
MMP28-207ENST00000619655 AMNQ9BXJ7 453 aa22.76■■□□□ 1.23
MMP28-207ENST00000619655 CD2APQ9Y5K6 639 aa22.76■■□□□ 1.23
MMP28-207ENST00000619655 CD44P16070 742 aaKnown RBP22.76■■□□□ 1.23
MMP28-207ENST00000619655 STX17P56962 302 aa22.76■■□□□ 1.23
MMP28-207ENST00000619655 RASA3Q14644 834 aa22.76■■□□□ 1.23
MMP28-207ENST00000619655 SAMD7Q7Z3H4 446 aa22.76■■□□□ 1.23
MMP28-207ENST00000619655 NLGN2Q8NFZ4 835 aa22.76■■□□□ 1.23
MMP28-207ENST00000619655 SGIP1Q9BQI5 828 aa22.76■■□□□ 1.23
MMP28-207ENST00000619655 MYH7BA7E2Y1 1941 aa22.76■■□□□ 1.23
MMP28-207ENST00000619655 GTPBP6O43824 516 aaPredicted RBP22.75■■□□□ 1.23
MMP28-207ENST00000619655 FAM83BQ5T0W9 1011 aa22.75■■□□□ 1.23
MMP28-207ENST00000619655 FBXO11Q86XK2 927 aa22.75■■□□□ 1.23
MMP28-207ENST00000619655 GJA10Q969M2 543 aa22.75■■□□□ 1.23
MMP28-207ENST00000619655 AK8Q96MA6 479 aa22.75■■□□□ 1.23
MMP28-207ENST00000619655 CCSER1Q9C0I3 900 aa22.75■■□□□ 1.23
MMP28-207ENST00000619655 GOPCQ9HD26 462 aa22.75■■□□□ 1.23
MMP28-207ENST00000619655 PLCG1P19174 1290 aa22.75■■□□□ 1.23
MMP28-207ENST00000619655 GMPSP49915 693 aaPredicted RBP22.75■■□□□ 1.23
MMP28-207ENST00000619655 STAT2P52630 851 aa22.75■■□□□ 1.23
MMP28-207ENST00000619655 TBC1D10BQ4KMP7 808 aaPredicted RBP22.75■■□□□ 1.23
MMP28-207ENST00000619655 TMC6Q7Z403 805 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms