RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 MCMDC2Q4G0Z9 681 aa13.19□□□□□ -0.3
TARDBP-221ENST00000619555 RRP12Q5JTH9 1297 aaKnown RBP13.19□□□□□ -0.3
TARDBP-221ENST00000619555 GNASQ5JWF2 1037 aa13.19□□□□□ -0.3
TARDBP-221ENST00000619555 ZNF697Q5TEC3 545 aa13.19□□□□□ -0.3
TARDBP-221ENST00000619555 PCSK9Q8NBP7 692 aaKnown RBP13.19□□□□□ -0.3
TARDBP-221ENST00000619555 VTI1AQ96AJ9 217 aa13.19□□□□□ -0.3
TARDBP-221ENST00000619555 GLT1D1Q96MS3 346 aa13.19□□□□□ -0.3
TARDBP-221ENST00000619555 PURBQ96QR8 312 aaKnown RBP13.19□□□□□ -0.3
TARDBP-221ENST00000619555 LNPKQ9C0E8 428 aa13.19□□□□□ -0.3
TARDBP-221ENST00000619555 SEMA6BQ9H3T3 888 aa13.19□□□□□ -0.3
TARDBP-221ENST00000619555 SPC25Q9HBM1 224 aa13.19□□□□□ -0.3
TARDBP-221ENST00000619555 ASTN1O14525 1302 aa13.18□□□□□ -0.3
TARDBP-221ENST00000619555 ELP1O95163 1332 aa13.18□□□□□ -0.3
TARDBP-221ENST00000619555 HSPD1P10809 573 aaKnown RBP13.18□□□□□ -0.3
TARDBP-221ENST00000619555 SLC16A2P36021 539 aa13.18□□□□□ -0.3
TARDBP-221ENST00000619555 CDK7P50613 346 aa13.18□□□□□ -0.3
TARDBP-221ENST00000619555 HAND2P61296 217 aa13.18□□□□□ -0.3
TARDBP-221ENST00000619555 TNFAIP2Q03169 654 aa13.18□□□□□ -0.3
TARDBP-221ENST00000619555 C1QBPQ07021 282 aaKnown RBP13.18□□□□□ -0.3
TARDBP-221ENST00000619555 NOL8Q76FK4 1167 aaKnown RBP13.18□□□□□ -0.3
TARDBP-221ENST00000619555 ZNF589Q86UQ0 364 aaPredicted RBP13.18□□□□□ -0.3
TARDBP-221ENST00000619555 DCAF4Q8WV16 495 aa13.18□□□□□ -0.3
TARDBP-221ENST00000619555 TMEM47Q9BQJ4 181 aa13.18□□□□□ -0.3
TARDBP-221ENST00000619555 RWDD1Q9H446 243 aaPredicted RBP13.18□□□□□ -0.3
TARDBP-221ENST00000619555 PDGFCQ9NRA1 345 aa13.18□□□□□ -0.3
TARDBP-221ENST00000619555 CYP39A1Q9NYL5 469 aa13.18□□□□□ -0.3
TARDBP-221ENST00000619555 TBX21Q9UL17 535 aa13.18□□□□□ -0.3
TARDBP-221ENST00000619555 CCPG1Q9ULG6 757 aa13.18□□□□□ -0.3
TARDBP-221ENST00000619555 CDH23Q9H251 3354 aa13.18□□□□□ -0.3
TARDBP-221ENST00000619555 UNC80Q8N2C7 3258 aa13.17□□□□□ -0.3
TARDBP-221ENST00000619555 ASB14A6NK59 587 aa13.17□□□□□ -0.3
TARDBP-221ENST00000619555 TRIM6-TRIM34B2RNG4 842 aa13.17□□□□□ -0.3
TARDBP-221ENST00000619555 ARVCFO00192 962 aa13.17□□□□□ -0.3
TARDBP-221ENST00000619555 TIMP1P01033 207 aa13.17□□□□□ -0.3
TARDBP-221ENST00000619555 TOP1P11387 765 aaKnown RBP13.17□□□□□ -0.3
TARDBP-221ENST00000619555 SMAD3P84022 425 aaKnown RBP13.17□□□□□ -0.3
TARDBP-221ENST00000619555 FPGSQ05932 587 aa13.17□□□□□ -0.3
TARDBP-221ENST00000619555 TMEM63BQ5T3F8 832 aa13.17□□□□□ -0.3
TARDBP-221ENST00000619555 B4GALNT3Q6L9W6 998 aa13.17□□□□□ -0.3
TARDBP-221ENST00000619555 NSMFQ6X4W1 530 aa13.17□□□□□ -0.3
TARDBP-221ENST00000619555 EEPD1Q7L9B9 569 aa13.17□□□□□ -0.3
TARDBP-221ENST00000619555 RILPL2Q969X0 211 aa13.17□□□□□ -0.3
TARDBP-221ENST00000619555 RNPC3Q96LT9 517 aaKnown RBP13.17□□□□□ -0.3
TARDBP-221ENST00000619555 CDX2Q99626 313 aaPredicted RBP13.17□□□□□ -0.3
TARDBP-221ENST00000619555 RANBP17Q9H2T7 1088 aaKnown RBP13.17□□□□□ -0.3
TARDBP-221ENST00000619555 TTYH1Q9H313 450 aaPredicted RBP13.17□□□□□ -0.3
TARDBP-221ENST00000619555 GPCPD1Q9NPB8 672 aa13.17□□□□□ -0.3
TARDBP-221ENST00000619555 GNEQ9Y223 722 aaKnown RBP13.17□□□□□ -0.3
TARDBP-221ENST00000619555 FRMPD2Q68DX3 1309 aaPredicted RBP13.16□□□□□ -0.3
TARDBP-221ENST00000619555 LCTP09848 1927 aa13.16□□□□□ -0.3
TARDBP-221ENST00000619555 A0A0U1RQG5 324 aaPredicted RBP13.16□□□□□ -0.3
TARDBP-221ENST00000619555 DYNC1LI2O43237 492 aaPredicted RBP13.16□□□□□ -0.3
TARDBP-221ENST00000619555 ICAM1P05362 532 aa13.16□□□□□ -0.3
TARDBP-221ENST00000619555 SMPD1P17405 629 aa13.16□□□□□ -0.3
TARDBP-221ENST00000619555 NKX3-2P78367 333 aa13.16□□□□□ -0.3
TARDBP-221ENST00000619555 SYDE2Q5VT97 1194 aa13.16□□□□□ -0.3
TARDBP-221ENST00000619555 CXCL17Q6UXB2 119 aa13.16□□□□□ -0.3
TARDBP-221ENST00000619555 BTNL9Q6UXG8 535 aa13.16□□□□□ -0.3
TARDBP-221ENST00000619555 FBXO16Q8IX29 292 aaPredicted RBP13.16□□□□□ -0.3
TARDBP-221ENST00000619555 TCP11L1Q9NUJ3 509 aa13.16□□□□□ -0.3
TARDBP-221ENST00000619555 CCDC171Q6TFL3 1326 aa13.15□□□□□ -0.3
TARDBP-221ENST00000619555 NUCB1Q02818 461 aa13.15□□□□□ -0.3
TARDBP-221ENST00000619555 BAATQ14032 418 aaPredicted RBP13.15□□□□□ -0.3
TARDBP-221ENST00000619555 MFSD5Q6N075 450 aa13.15□□□□□ -0.3
TARDBP-221ENST00000619555 TAPT1Q6NXT6 567 aa13.15□□□□□ -0.3
TARDBP-221ENST00000619555 C16orf59Q7L2K0 433 aa13.15□□□□□ -0.3
TARDBP-221ENST00000619555 TLK2Q86UE8 772 aa13.15□□□□□ -0.3
TARDBP-221ENST00000619555 TBC1D10CQ8IV04 446 aa13.15□□□□□ -0.3
TARDBP-221ENST00000619555 FAM126BQ8IXS8 530 aa13.15□□□□□ -0.3
TARDBP-221ENST00000619555 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.15□□□□□ -0.31e-6■□□□□ 10.9
TARDBP-221ENST00000619555 AP5M1Q9H0R1 490 aa13.15□□□□□ -0.3
TARDBP-221ENST00000619555 MROH7Q68CQ1 1323 aa13.14□□□□□ -0.31
TARDBP-221ENST00000619555 NFIBO00712 420 aa13.14□□□□□ -0.31
TARDBP-221ENST00000619555 PDHBP11177 359 aa13.14□□□□□ -0.31
TARDBP-221ENST00000619555 SDSP20132 328 aa13.14□□□□□ -0.31
TARDBP-221ENST00000619555 FSCN1Q16658 493 aaKnown RBP13.14□□□□□ -0.31
TARDBP-221ENST00000619555 AKNAD1Q5T1N1 836 aa13.14□□□□□ -0.31
TARDBP-221ENST00000619555 IQSEC1Q6DN90 963 aa13.14□□□□□ -0.31
TARDBP-221ENST00000619555 MFSD6Q6ZSS7 791 aa13.14□□□□□ -0.31
TARDBP-221ENST00000619555 TICAM2Q86XR7 235 aa13.14□□□□□ -0.31
TARDBP-221ENST00000619555 PLEKHM2Q8IWE5 1019 aa13.14□□□□□ -0.31
TARDBP-221ENST00000619555 MYLIPQ8WY64 445 aa13.14□□□□□ -0.31
TARDBP-221ENST00000619555 PPP1R12CQ9BZL4 782 aa13.14□□□□□ -0.31
TARDBP-221ENST00000619555 GRIN2DO15399 1336 aa13.13□□□□□ -0.31
TARDBP-221ENST00000619555 ZMYM6O95789 1325 aa13.13□□□□□ -0.31
TARDBP-221ENST00000619555 LRRC37A2A6NM11 1700 aa13.13□□□□□ -0.31
TARDBP-221ENST00000619555 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.13□□□□□ -0.31
TARDBP-221ENST00000619555 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.13□□□□□ -0.31
TARDBP-221ENST00000619555 TLR3O15455 904 aaKnown RBP13.13□□□□□ -0.31
TARDBP-221ENST00000619555 CD4P01730 458 aa13.13□□□□□ -0.31
TARDBP-221ENST00000619555 ACRP10323 421 aa13.13□□□□□ -0.31
TARDBP-221ENST00000619555 CSF2RAP15509 400 aa13.13□□□□□ -0.31
TARDBP-221ENST00000619555 CYP2C18P33260 490 aa13.13□□□□□ -0.31
TARDBP-221ENST00000619555 ZNF543Q08ER8 600 aa13.13□□□□□ -0.31
TARDBP-221ENST00000619555 PPIGQ13427 754 aaKnown RBP eCLIP13.13□□□□□ -0.314e-11■□□□□ 9.2
TARDBP-221ENST00000619555 TMEM240Q5SV17 173 aa13.13□□□□□ -0.31
TARDBP-221ENST00000619555 KIAA1211Q6ZU35 1233 aa13.13□□□□□ -0.31
TARDBP-221ENST00000619555 CHD1LQ86WJ1 897 aa13.13□□□□□ -0.31
TARDBP-221ENST00000619555 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.13□□□□□ -0.31
TARDBP-221ENST00000619555 SLC43A3Q8NBI5 491 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms