RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 GGA3Q9NZ52 723 aa14.43□□□□□ -0.1
TNFAIP3-209ENST00000619035 SERTAD1Q9UHV2 236 aa14.43□□□□□ -0.1
TNFAIP3-209ENST00000619035 DDNO94850 711 aaPredicted RBP14.43□□□□□ -0.1
TNFAIP3-209ENST00000619035 IL17AQ16552 155 aa14.43□□□□□ -0.1
TNFAIP3-209ENST00000619035 DPCR1Q3MIW9 517 aa14.43□□□□□ -0.1
TNFAIP3-209ENST00000619035 DHX58Q96C10 678 aa14.43□□□□□ -0.1
TNFAIP3-209ENST00000619035 ZNF341Q9BYN7 854 aa14.43□□□□□ -0.1
TNFAIP3-209ENST00000619035 TMEM60Q9H2L4 133 aa14.43□□□□□ -0.1
TNFAIP3-209ENST00000619035 FOXN1O15353 648 aa14.42□□□□□ -0.1
TNFAIP3-209ENST00000619035 YBX3P16989 372 aaKnown RBP eCLIP14.42□□□□□ -0.1
TNFAIP3-209ENST00000619035 TAL1P17542 331 aaPredicted RBP14.42□□□□□ -0.1
TNFAIP3-209ENST00000619035 MRPL12P52815 198 aaKnown RBP14.42□□□□□ -0.1
TNFAIP3-209ENST00000619035 DHX40Q8IX18 779 aaKnown RBP14.42□□□□□ -0.1
TNFAIP3-209ENST00000619035 C4orf32Q8N8J7 132 aa14.42□□□□□ -0.1
TNFAIP3-209ENST00000619035 GLT8D2Q9H1C3 349 aa14.42□□□□□ -0.1
TNFAIP3-209ENST00000619035 VCPKMTQ9H867 229 aa14.42□□□□□ -0.1
TNFAIP3-209ENST00000619035 ANO10Q9NW15 660 aa14.42□□□□□ -0.1
TNFAIP3-209ENST00000619035 PRR12Q9ULL5 1215 aa14.42□□□□□ -0.1
TNFAIP3-209ENST00000619035 A0A087X0B3 334 aa14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 DCAF15Q66K64 600 aa14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 ARL6IP4Q66PJ3 421 aaKnown RBP14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 BTNL9Q6UXG8 535 aa14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 FBXO11Q86XK2 927 aa14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 TEX2Q8IWB9 1127 aa14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 C17orf53Q8N3J3 647 aaPredicted RBP14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 KIFC2Q96AC6 838 aa14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 AMNQ9BXJ7 453 aa14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 TRIM5Q9C035 493 aa14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 FZD1Q9UP38 647 aa14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 PITPNM2Q9BZ72 1349 aa14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 USP17L15C9J2P7 530 aa14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 USP17L13C9JLJ4 530 aa14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 USP17L11C9JVI0 530 aa14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 USP17L18D6R9N7 530 aa14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 USP17L22D6RA61 530 aa14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 USP17L17D6RBQ6 530 aa14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 USP17L19D6RCP7 530 aa14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 USP17L20D6RJB6 530 aa14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 NEMFO60524 1076 aa14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 CDC25AP30304 524 aa14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 USP17L24Q0WX57 530 aa14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 TRAF1Q13077 416 aa14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 USP17L6PQ6QN14 398 aa14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 DTHD1Q6ZMT9 781 aa14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 GRAMD1CQ8IYS0 662 aa14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 AOPEPQ8N6M6 819 aa14.41□□□□□ -0.1
TNFAIP3-209ENST00000619035 GOLGA6L19H0YKK7 550 aa14.4□□□□□ -0.1
TNFAIP3-209ENST00000619035 CTNND1O60716 968 aaKnown RBP14.4□□□□□ -0.1
TNFAIP3-209ENST00000619035 PLA2G6O60733 806 aa14.4□□□□□ -0.1
TNFAIP3-209ENST00000619035 INPP5BP32019 993 aa14.4□□□□□ -0.1
TNFAIP3-209ENST00000619035 HIRAP54198 1017 aaPredicted RBP14.4□□□□□ -0.1
TNFAIP3-209ENST00000619035 NRBP1Q9UHY1 535 aa14.4□□□□□ -0.1
TNFAIP3-209ENST00000619035 HOOK1Q9UJC3 728 aaKnown RBP14.4□□□□□ -0.1
TNFAIP3-209ENST00000619035 ZC3H4Q9UPT8 1303 aaKnown RBP14.4□□□□□ -0.1
TNFAIP3-209ENST00000619035 ACTN4O43707 911 aaKnown RBP14.4□□□□□ -0.1
TNFAIP3-209ENST00000619035 CCDC174Q6PII3 467 aa14.4□□□□□ -0.1
TNFAIP3-209ENST00000619035 CEP57L1Q8IYX8 460 aa14.4□□□□□ -0.1
TNFAIP3-209ENST00000619035 ATAD5Q96QE3 1844 aa14.4□□□□□ -0.1
TNFAIP3-209ENST00000619035 BECN2A8MW95 431 aa14.39□□□□□ -0.11
TNFAIP3-209ENST00000619035 PRR29P0C7W0 189 aa14.39□□□□□ -0.11
TNFAIP3-209ENST00000619035 LMOD1P29536 600 aaPredicted RBP14.39□□□□□ -0.11
TNFAIP3-209ENST00000619035 LONP1P36776 959 aaKnown RBP14.39□□□□□ -0.11
TNFAIP3-209ENST00000619035 CLK2P49760 499 aaKnown RBP14.39□□□□□ -0.11
TNFAIP3-209ENST00000619035 ZNF75DP51815 510 aa14.39□□□□□ -0.11
TNFAIP3-209ENST00000619035 ORC2Q13416 577 aaPredicted RBP14.39□□□□□ -0.11
TNFAIP3-209ENST00000619035 DGKZQ13574 1117 aa14.39□□□□□ -0.11
TNFAIP3-209ENST00000619035 POSTNQ15063 836 aa14.39□□□□□ -0.11
TNFAIP3-209ENST00000619035 POTEDQ86YR6 584 aa14.39□□□□□ -0.11
TNFAIP3-209ENST00000619035 KCNF1Q9H3M0 494 aa14.39□□□□□ -0.11
TNFAIP3-209ENST00000619035 PP2D1A8MPX8 630 aa14.39□□□□□ -0.11
TNFAIP3-209ENST00000619035 LAD1O00515 517 aa14.39□□□□□ -0.11
TNFAIP3-209ENST00000619035 TDP2O95551 362 aa14.39□□□□□ -0.11
TNFAIP3-209ENST00000619035 CAVIN2O95810 425 aa14.39□□□□□ -0.11
TNFAIP3-209ENST00000619035 OR52Z1P0C646 297 aa14.39□□□□□ -0.11
TNFAIP3-209ENST00000619035 AFMP43652 599 aa14.39□□□□□ -0.11
TNFAIP3-209ENST00000619035 C9orf131Q5VYM1 1079 aa14.39□□□□□ -0.11
TNFAIP3-209ENST00000619035 PLA2G4DQ86XP0 818 aa14.39□□□□□ -0.11
TNFAIP3-209ENST00000619035 DRC7Q8IY82 874 aa14.39□□□□□ -0.11
TNFAIP3-209ENST00000619035 RASSF8Q8NHQ8 419 aa14.39□□□□□ -0.11
TNFAIP3-209ENST00000619035 ZKSCAN4Q969J2 545 aaPredicted RBP14.39□□□□□ -0.11
TNFAIP3-209ENST00000619035 WRNIP1Q96S55 665 aa14.39□□□□□ -0.11
TNFAIP3-209ENST00000619035 ADARB2Q9NS39 739 aaKnown RBP14.39□□□□□ -0.11
TNFAIP3-209ENST00000619035 FBXO28Q9NVF7 368 aa14.39□□□□□ -0.11
TNFAIP3-209ENST00000619035 PCDHA5Q9Y5H7 936 aa14.39□□□□□ -0.11
TNFAIP3-209ENST00000619035 TXLNAP40222 546 aa14.38□□□□□ -0.11
TNFAIP3-209ENST00000619035 PRKG1Q13976 671 aa14.38□□□□□ -0.11
TNFAIP3-209ENST00000619035 MCTP2Q6DN12 878 aa14.38□□□□□ -0.11
TNFAIP3-209ENST00000619035 CHURC1Q8WUH1 139 aa14.38□□□□□ -0.11
TNFAIP3-209ENST00000619035 NAT10Q9H0A0 1025 aaKnown RBP14.38□□□□□ -0.11
TNFAIP3-209ENST00000619035 ZNF112Q9UJU3 913 aa14.38□□□□□ -0.11
TNFAIP3-209ENST00000619035 SLC37A4O43826 429 aa14.38□□□□□ -0.11
TNFAIP3-209ENST00000619035 ZNF500O60304 480 aaPredicted RBP14.38□□□□□ -0.11
TNFAIP3-209ENST00000619035 PTGS1P23219 599 aa14.38□□□□□ -0.11
TNFAIP3-209ENST00000619035 NLRP12P59046 1061 aa14.38□□□□□ -0.11
TNFAIP3-209ENST00000619035 MDM2Q00987 491 aaPredicted RBP14.38□□□□□ -0.11
TNFAIP3-209ENST00000619035 ILDR2Q71H61 639 aa14.38□□□□□ -0.11
TNFAIP3-209ENST00000619035 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.38□□□□□ -0.11
TNFAIP3-209ENST00000619035 TUBE1Q9UJT0 475 aa14.38□□□□□ -0.11
TNFAIP3-209ENST00000619035 SLFN14P0C7P3 912 aa14.37□□□□□ -0.11
TNFAIP3-209ENST00000619035 PRPHP41219 470 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms