RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 TSPY3P0CV98 308 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 TSPY8P0CW00 308 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 GYS2P54840 703 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 RESP18Q5W5W9 173 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 TRIM65Q6PJ69 517 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 TRIML1Q8N9V2 468 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 C7orf43Q8WVR3 580 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 JDP2Q8WYK2 163 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 AIFM3Q96NN9 605 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 DEF6Q9H4E7 631 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 SERTAD1Q9UHV2 236 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 ANAPC4Q9UJX5 808 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 TACC3Q9Y6A5 838 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 WDR19Q8NEZ3 1342 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 MYO1CO00159 1063 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 CRKP46108 304 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 TGFB2P61812 414 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 TCP10Q12799 353 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 RTN1Q16799 776 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 C12orf60Q5U649 245 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 SHC4Q6S5L8 630 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 CATIPQ7Z7H3 387 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 NIM1KQ8IY84 436 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 DIS3L2Q8IYB7 885 aaKnown RBP7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 SLC44A5Q8NCS7 719 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 ENOX1Q8TC92 643 aaKnown RBP7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 ZSCAN10Q96SZ4 725 aaPredicted RBP7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 LY9Q9HBG7 655 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 FAM53CQ9NYF3 392 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 STX8Q9UNK0 236 aa7.84□□□□□ -1.15
SRGAP3-213ENST00000618999 DSG3P32926 999 aa7.84□□□□□ -1.16
SRGAP3-213ENST00000618999 LIFRP42702 1097 aa7.84□□□□□ -1.16
SRGAP3-213ENST00000618999 PLCD1P51178 756 aa7.84□□□□□ -1.16
SRGAP3-213ENST00000618999 CACNB3P54284 484 aa7.84□□□□□ -1.16
SRGAP3-213ENST00000618999 SBK1Q52WX2 424 aa7.84□□□□□ -1.16
SRGAP3-213ENST00000618999 SOGA3Q5TF21 947 aa7.84□□□□□ -1.16
SRGAP3-213ENST00000618999 NOSTRINQ8IVI9 506 aa7.84□□□□□ -1.16
SRGAP3-213ENST00000618999 OGFOD1Q8N543 542 aa7.84□□□□□ -1.16
SRGAP3-213ENST00000618999 CDHR5Q9HBB8 845 aa7.84□□□□□ -1.16
SRGAP3-213ENST00000618999 ZNHIT6Q9NWK9 470 aaKnown RBP7.84□□□□□ -1.16
SRGAP3-213ENST00000618999 MAN1B1Q9UKM7 699 aa7.84□□□□□ -1.16
SRGAP3-213ENST00000618999 RRP15Q9Y3B9 282 aaKnown RBP7.84□□□□□ -1.16
SRGAP3-213ENST00000618999 SYNRGQ9UMZ2 1314 aa7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 ARAP2Q8WZ64 1704 aa7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 PCP11498 1178 aaKnown RBP7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 SETQ01105 290 aaPredicted RBP7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 TTC31Q49AM3 519 aaPredicted RBP7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 IQCEQ6IPM2 695 aa7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 KIAA1328Q86T90 577 aa7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 IPO4Q8TEX9 1081 aaKnown RBP7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 FAM163AQ96GL9 167 aaPredicted RBP7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 FAM107BQ9H098 131 aa7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 PRM3Q9NNZ6 103 aa7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 GPCPD1Q9NPB8 672 aa7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 FEZ2Q9UHY8 353 aaPredicted RBP7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 SOWAHDA6NJG2 315 aa7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 NMT2O60551 498 aa7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 CHRM1P11229 460 aaPredicted RBP7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 SPAG1Q07617 926 aa7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 GRIPAP1Q4V328 841 aa7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 ZNF654Q8IZM8 581 aa7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 CMTR1Q8N1G2 835 aaKnown RBP7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 CRACR2BQ8N4Y2 399 aaPredicted RBP7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 TMC2Q8TDI7 906 aa7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 MAGEC2Q9UBF1 373 aaPredicted RBP7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 MKRN1Q9UHC7 482 aaKnown RBP7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 MYH7P12883 1935 aa7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 TRIM75PA6NK02 468 aa7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 KCNA3P22001 575 aa7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 GTF2A1P52655 376 aaPredicted RBP7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 WHAMMP3Q1A5X7 153 aa7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 DACT2Q5SW24 774 aa7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 METTL16Q86W50 562 aaKnown RBP7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 TMTC1Q8IUR5 882 aa7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 PANX2Q96RD6 677 aa7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 TAOK3Q9H2K8 898 aa7.83□□□□□ -1.16
SRGAP3-213ENST00000618999 FLT1P17948 1338 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 HLA-DOAP06340 250 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 ERCC5P28715 1186 aaPredicted RBP7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 RHBDL3P58872 404 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 SLC20A2Q08357 652 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 ZNF662Q6ZS27 426 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 SGMS1Q86VZ5 419 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 FBXL16Q8N461 479 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 ENAHQ8N8S7 591 aaPredicted RBP7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 CTCFLQ8NI51 663 aaPredicted RBP7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 KAT14Q9H8E8 782 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 SAMSN1Q9NSI8 373 aaKnown RBP7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 TMOD2Q9NZR1 351 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 LIMD1Q9UGP4 676 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 HDAC9Q9UKV0 1011 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 HPS5Q9UPZ3 1129 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 CCT6AP40227 531 aaKnown RBP7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 ATP2B2Q01814 1243 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 CDC42EP5Q6NZY7 148 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 HHIPL2Q6UWX4 724 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 FAM71BQ8TC56 605 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 CCDC51Q96ER9 411 aa7.82□□□□□ -1.16
SRGAP3-213ENST00000618999 FAN1Q9Y2M0 1017 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms