RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 WNK3Q9BYP7 1800 aa22.8■■□□□ 1.24
NEK3-208ENST00000618534 TARSL2A2RTX5 802 aaKnown RBP22.8■■□□□ 1.24
NEK3-208ENST00000618534 EIF3CLB5ME19 914 aaKnown RBP22.8■■□□□ 1.24
NEK3-208ENST00000618534 PDE2AO00408 941 aaPredicted RBP22.8■■□□□ 1.24
NEK3-208ENST00000618534 PLCG1P19174 1290 aa22.8■■□□□ 1.24
NEK3-208ENST00000618534 MCM3P25205 808 aa22.8■■□□□ 1.24
NEK3-208ENST00000618534 ZBED6P86452 979 aa22.8■■□□□ 1.24
NEK3-208ENST00000618534 CYP27A1Q02318 531 aa22.8■■□□□ 1.24
NEK3-208ENST00000618534 GRM4Q14833 912 aa22.8■■□□□ 1.24
NEK3-208ENST00000618534 ANKRD40Q6AI12 368 aa22.8■■□□□ 1.24
NEK3-208ENST00000618534 GSPT2Q8IYD1 628 aaKnown RBP22.8■■□□□ 1.24
NEK3-208ENST00000618534 CAGE1Q8TC20 777 aa22.8■■□□□ 1.24
NEK3-208ENST00000618534 P2RX5Q93086 422 aa22.8■■□□□ 1.24
NEK3-208ENST00000618534 GDAP1L1Q96MZ0 367 aa22.8■■□□□ 1.24
NEK3-208ENST00000618534 EIF3CQ99613 913 aaKnown RBP22.8■■□□□ 1.24
NEK3-208ENST00000618534 NUP58Q9BVL2 599 aa22.8■■□□□ 1.24
NEK3-208ENST00000618534 MAD2L2Q9UI95 211 aa22.8■■□□□ 1.24
NEK3-208ENST00000618534 MTMR7Q9Y216 660 aa22.8■■□□□ 1.24
NEK3-208ENST00000618534 FLT1P17948 1338 aa22.8■■□□□ 1.24
NEK3-208ENST00000618534 RPGRIP1Q96KN7 1286 aa22.8■■□□□ 1.24
NEK3-208ENST00000618534 PCMTD1Q96MG8 357 aaPredicted RBP22.8■■□□□ 1.24
NEK3-208ENST00000618534 ZC3H4Q9UPT8 1303 aaKnown RBP22.8■■□□□ 1.24
NEK3-208ENST00000618534 MYH1P12882 1939 aa22.8■■□□□ 1.24
NEK3-208ENST00000618534 MACROD2A1Z1Q3 448 aa22.79■■□□□ 1.24
NEK3-208ENST00000618534 CYTH3O43739 400 aa22.79■■□□□ 1.24
NEK3-208ENST00000618534 IPO7O95373 1038 aaKnown RBP22.79■■□□□ 1.24
NEK3-208ENST00000618534 CCNE1P24864 410 aa22.79■■□□□ 1.24
NEK3-208ENST00000618534 CCDC178Q5BJE1 867 aa22.79■■□□□ 1.24
NEK3-208ENST00000618534 DGKHQ86XP1 1220 aa22.79■■□□□ 1.24
NEK3-208ENST00000618534 CCDC170Q8IYT3 715 aa22.79■■□□□ 1.24
NEK3-208ENST00000618534 DAGLBQ8NCG7 672 aa22.79■■□□□ 1.24
NEK3-208ENST00000618534 DYNLL2Q96FJ2 89 aa22.79■■□□□ 1.24
NEK3-208ENST00000618534 TRIM34Q9BYJ4 488 aa22.79■■□□□ 1.24
NEK3-208ENST00000618534 RASSF4Q9H2L5 321 aa22.79■■□□□ 1.24
NEK3-208ENST00000618534 NKRFO15226 690 aaKnown RBP eCLIP22.79■■□□□ 1.24
NEK3-208ENST00000618534 PDE4DQ08499 809 aa22.79■■□□□ 1.24
NEK3-208ENST00000618534 RETREG2Q8NC44 543 aa22.79■■□□□ 1.24
NEK3-208ENST00000618534 PURBQ96QR8 312 aaKnown RBP22.79■■□□□ 1.24
NEK3-208ENST00000618534 STXBP3O00186 592 aa22.78■■□□□ 1.24
NEK3-208ENST00000618534 PRPF6O94906 941 aaKnown RBP22.78■■□□□ 1.24
NEK3-208ENST00000618534 MYBL2P10244 700 aa22.78■■□□□ 1.24
NEK3-208ENST00000618534 IDEP14735 1019 aa22.78■■□□□ 1.24
NEK3-208ENST00000618534 HIBADHP31937 336 aaKnown RBP22.78■■□□□ 1.24
NEK3-208ENST00000618534 MTIF2P46199 727 aaKnown RBP22.78■■□□□ 1.24
NEK3-208ENST00000618534 STK4Q13043 487 aa22.78■■□□□ 1.24
NEK3-208ENST00000618534 MIIPQ5JXC2 388 aa22.78■■□□□ 1.24
NEK3-208ENST00000618534 LRRC31Q6UY01 552 aa22.78■■□□□ 1.24
NEK3-208ENST00000618534 CABP7Q86V35 215 aa22.78■■□□□ 1.24
NEK3-208ENST00000618534 COG1Q8WTW3 980 aa22.78■■□□□ 1.24
NEK3-208ENST00000618534 TRIM9Q9C026 710 aa22.78■■□□□ 1.24
NEK3-208ENST00000618534 ANO9A1A5B4 782 aa22.78■■□□□ 1.24
NEK3-208ENST00000618534 USP17L3A6NCW0 530 aa22.78■■□□□ 1.24
NEK3-208ENST00000618534 USP17L4A6NCW7 530 aa22.78■■□□□ 1.24
NEK3-208ENST00000618534 C2orf54Q08AI8 447 aa22.78■■□□□ 1.24
NEK3-208ENST00000618534 USP17L1Q7RTZ2 530 aa22.78■■□□□ 1.24
NEK3-208ENST00000618534 RIN2Q8WYP3 895 aaPredicted RBP22.78■■□□□ 1.24
NEK3-208ENST00000618534 BICDL2A1A5D9 508 aa22.77■■□□□ 1.24
NEK3-208ENST00000618534 FCER1AP12319 257 aa22.77■■□□□ 1.24
NEK3-208ENST00000618534 PRPHP41219 470 aa22.77■■□□□ 1.24
NEK3-208ENST00000618534 ASIC1P78348 528 aa22.77■■□□□ 1.24
NEK3-208ENST00000618534 SEMA3FQ13275 785 aa22.77■■□□□ 1.24
NEK3-208ENST00000618534 TXNRD1Q16881 649 aa22.77■■□□□ 1.24
NEK3-208ENST00000618534 AFAP1L1Q8TED9 768 aa22.77■■□□□ 1.24
NEK3-208ENST00000618534 NOC4LQ9BVI4 516 aaKnown RBP22.77■■□□□ 1.24
NEK3-208ENST00000618534 JADE2Q9NQC1 790 aa22.77■■□□□ 1.24
NEK3-208ENST00000618534 BARHL2Q9NY43 387 aa22.77■■□□□ 1.24
NEK3-208ENST00000618534 LAD1O00515 517 aa22.77■■□□□ 1.24
NEK3-208ENST00000618534 ZNF263O14978 683 aa22.77■■□□□ 1.24
NEK3-208ENST00000618534 BICDL1Q6ZP65 573 aa22.77■■□□□ 1.24
NEK3-208ENST00000618534 MAST2Q6P0Q8 1798 aa22.77■■□□□ 1.23
NEK3-208ENST00000618534 VGLL3A8MV65 326 aa22.76■■□□□ 1.23
NEK3-208ENST00000618534 PLEKP08567 350 aaPredicted RBP22.76■■□□□ 1.23
NEK3-208ENST00000618534 GNAQP50148 359 aa22.76■■□□□ 1.23
NEK3-208ENST00000618534 C12orf60Q5U649 245 aa22.76■■□□□ 1.23
NEK3-208ENST00000618534 KRT26Q7Z3Y9 468 aa22.76■■□□□ 1.23
NEK3-208ENST00000618534 FAM114A1Q8IWE2 563 aa22.76■■□□□ 1.23
NEK3-208ENST00000618534 GOLGA6L1Q8N7Z2 621 aa22.76■■□□□ 1.23
NEK3-208ENST00000618534 SECISBP2LQ93073 1101 aaKnown RBP22.76■■□□□ 1.23
NEK3-208ENST00000618534 CUEDC2Q9H467 287 aa22.76■■□□□ 1.23
NEK3-208ENST00000618534 LRWD1Q9UFC0 647 aa22.76■■□□□ 1.23
NEK3-208ENST00000618534 NUTM2BA6NNL0 878 aaPredicted RBP22.76■■□□□ 1.23
NEK3-208ENST00000618534 NUTM2EB1AL46 878 aaPredicted RBP22.76■■□□□ 1.23
NEK3-208ENST00000618534 VAV2P52735 878 aa22.76■■□□□ 1.23
NEK3-208ENST00000618534 KIF5AQ12840 1032 aa22.76■■□□□ 1.23
NEK3-208ENST00000618534 SMCR8Q8TEV9 937 aaPredicted RBP22.76■■□□□ 1.23
NEK3-208ENST00000618534 ANKS1AQ92625 1134 aa22.76■■□□□ 1.23
NEK3-208ENST00000618534 CCDC47Q96A33 483 aaKnown RBP22.76■■□□□ 1.23
NEK3-208ENST00000618534 SELENOOQ9BVL4 669 aa22.76■■□□□ 1.23
NEK3-208ENST00000618534 MAGEF1Q9HAY2 307 aa22.76■■□□□ 1.23
NEK3-208ENST00000618534 TCP11L1Q9NUJ3 509 aa22.76■■□□□ 1.23
NEK3-208ENST00000618534 OR52Z1P0C646 297 aa22.75■■□□□ 1.23
NEK3-208ENST00000618534 GALNT17Q6IS24 598 aa22.75■■□□□ 1.23
NEK3-208ENST00000618534 CCNI2Q6ZMN8 369 aaPredicted RBP22.75■■□□□ 1.23
NEK3-208ENST00000618534 ZSCAN29Q8IWY8 852 aaPredicted RBP22.75■■□□□ 1.23
NEK3-208ENST00000618534 HPS3Q969F9 1004 aa22.75■■□□□ 1.23
NEK3-208ENST00000618534 ERGIC2Q96RQ1 377 aa22.75■■□□□ 1.23
NEK3-208ENST00000618534 CCDC88AQ3V6T2 1871 aa22.75■■□□□ 1.23
NEK3-208ENST00000618534 CLEC4GQ6UXB4 293 aa22.74■■□□□ 1.23
NEK3-208ENST00000618534 DZIP1Q86YF9 867 aaKnown RBP22.74■■□□□ 1.23
NEK3-208ENST00000618534 MKRN1Q9UHC7 482 aaKnown RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms