RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 PTPN22Q9Y2R2 807 aa16.32■□□□□ 0.2
COL5A1-208ENST00000618395 ANKRD50Q9ULJ7 1429 aa16.32■□□□□ 0.2
COL5A1-208ENST00000618395 TRIM37O94972 964 aa16.32■□□□□ 0.2
COL5A1-208ENST00000618395 BRD8Q9H0E9 1235 aa16.32■□□□□ 0.2
COL5A1-208ENST00000618395 KAT6AQ92794 2004 aa16.32■□□□□ 0.2
COL5A1-208ENST00000618395 F6X3S4 739 aa16.32■□□□□ 0.2
COL5A1-208ENST00000618395 RNF14Q9UBS8 474 aa16.32■□□□□ 0.2
COL5A1-208ENST00000618395 NR1I2O75469 434 aa16.32■□□□□ 0.2
COL5A1-208ENST00000618395 HEXIM1O94992 359 aaKnown RBP16.32■□□□□ 0.2
COL5A1-208ENST00000618395 DNM2P50570 870 aa16.32■□□□□ 0.2
COL5A1-208ENST00000618395 ANGPT1Q15389 498 aa16.32■□□□□ 0.2
COL5A1-208ENST00000618395 TOM1L2Q6ZVM7 507 aa16.32■□□□□ 0.2
COL5A1-208ENST00000618395 CDR2LQ86X02 465 aaPredicted RBP16.32■□□□□ 0.2
COL5A1-208ENST00000618395 OR9Q1Q8NGQ5 310 aa16.32■□□□□ 0.2
COL5A1-208ENST00000618395 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.32■□□□□ 0.2
COL5A1-208ENST00000618395 BUB1O43683 1085 aa16.32■□□□□ 0.2
COL5A1-208ENST00000618395 KRR1Q13601 381 aaKnown RBP16.32■□□□□ 0.2
COL5A1-208ENST00000618395 NANOGNBQ7Z5D8 188 aa16.32■□□□□ 0.2
COL5A1-208ENST00000618395 FAM207AQ9NSI2 230 aaPredicted RBP16.32■□□□□ 0.2
COL5A1-208ENST00000618395 CAPN12Q6ZSI9 719 aa16.32■□□□□ 0.2
COL5A1-208ENST00000618395 CRLF3Q8IUI8 442 aa16.32■□□□□ 0.2
COL5A1-208ENST00000618395 SLC35F6Q8N357 371 aa16.32■□□□□ 0.2
COL5A1-208ENST00000618395 ZFP69BQ9UJL9 534 aa16.32■□□□□ 0.2
COL5A1-208ENST00000618395 S100A9P06702 114 aaKnown RBP16.31■□□□□ 0.2
COL5A1-208ENST00000618395 RBM6P78332 1123 aaKnown RBP16.31■□□□□ 0.2
COL5A1-208ENST00000618395 KIF22Q14807 665 aa16.31■□□□□ 0.2
COL5A1-208ENST00000618395 CCDC103Q8IW40 242 aa16.31■□□□□ 0.2
COL5A1-208ENST00000618395 UHMK1Q8TAS1 419 aaKnown RBP16.31■□□□□ 0.2
COL5A1-208ENST00000618395 CNBD2Q96M20 576 aa16.31■□□□□ 0.2
COL5A1-208ENST00000618395 GYS2P54840 703 aa16.31■□□□□ 0.2
COL5A1-208ENST00000618395 BZW1Q7L1Q6 419 aaKnown RBP16.31■□□□□ 0.2
COL5A1-208ENST00000618395 USP33Q8TEY7 942 aa16.31■□□□□ 0.2
COL5A1-208ENST00000618395 CCDC90BQ9GZT6 254 aa16.31■□□□□ 0.2
COL5A1-208ENST00000618395 AKNAD1Q5T1N1 836 aa16.31■□□□□ 0.2
COL5A1-208ENST00000618395 POMGNT1Q8WZA1 660 aa16.31■□□□□ 0.2
COL5A1-208ENST00000618395 KCNJ18B7U540 433 aa16.31■□□□□ 0.2
COL5A1-208ENST00000618395 LZTS3O60299 673 aaPredicted RBP16.31■□□□□ 0.2
COL5A1-208ENST00000618395 STAT1P42224 750 aa16.31■□□□□ 0.2
COL5A1-208ENST00000618395 KCNJ12Q14500 433 aa16.31■□□□□ 0.2
COL5A1-208ENST00000618395 TMED2Q15363 201 aa16.31■□□□□ 0.2
COL5A1-208ENST00000618395 TCP11X2Q5H9J9 407 aa16.31■□□□□ 0.2
COL5A1-208ENST00000618395 OLFML1Q6UWY5 402 aa16.31■□□□□ 0.2
COL5A1-208ENST00000618395 CDH24Q86UP0 819 aa16.31■□□□□ 0.2
COL5A1-208ENST00000618395 HIPK4Q8NE63 616 aa16.31■□□□□ 0.2
COL5A1-208ENST00000618395 SLC12A5Q9H2X9 1139 aa16.31■□□□□ 0.2
COL5A1-208ENST00000618395 BSPRYQ5W0U4 402 aa16.31■□□□□ 0.2
COL5A1-208ENST00000618395 DIAPH2O60879 1101 aa16.3■□□□□ 0.2
COL5A1-208ENST00000618395 PDCLQ13371 301 aa16.3■□□□□ 0.2
COL5A1-208ENST00000618395 GIPC2Q8TF65 315 aa16.3■□□□□ 0.2
COL5A1-208ENST00000618395 SPTLC3Q9NUV7 552 aa16.3■□□□□ 0.2
COL5A1-208ENST00000618395 MYLK4Q86YV6 388 aaPredicted RBP16.3■□□□□ 0.2
COL5A1-208ENST00000618395 CABP5Q9NP86 173 aa16.3■□□□□ 0.2
COL5A1-208ENST00000618395 GMEB1Q9Y692 573 aa16.3■□□□□ 0.2
COL5A1-208ENST00000618395 IL17RAQ96F46 866 aa16.3■□□□□ 0.2
COL5A1-208ENST00000618395 GINS4Q9BRT9 223 aa16.3■□□□□ 0.2
COL5A1-208ENST00000618395 COPB1P53618 953 aaKnown RBP16.3■□□□□ 0.2
COL5A1-208ENST00000618395 PLIN2Q99541 437 aa16.3■□□□□ 0.2
COL5A1-208ENST00000618395 NOVA2Q9UNW9 492 aaKnown RBP16.3■□□□□ 0.2
COL5A1-208ENST00000618395 TRIM66O15016 1216 aa16.3■□□□□ 0.2
COL5A1-208ENST00000618395 SPARCL1Q14515 664 aa16.3■□□□□ 0.2
COL5A1-208ENST00000618395 ARHGAP22Q7Z5H3 698 aa16.3■□□□□ 0.2
COL5A1-208ENST00000618395 DDHD1Q8NEL9 900 aa16.3■□□□□ 0.2
COL5A1-208ENST00000618395 SNRNP27Q8WVK2 155 aaKnown RBP16.3■□□□□ 0.2
COL5A1-208ENST00000618395 HDLBPQ00341 1268 aaKnown RBP16.3■□□□□ 0.2
COL5A1-208ENST00000618395 ZCRB1Q8TBF4 217 aaKnown RBP16.3■□□□□ 0.2
COL5A1-208ENST00000618395 ABCB6Q9NP58 842 aa16.3■□□□□ 0.2
COL5A1-208ENST00000618395 ZMYND12Q9H0C1 365 aa16.3■□□□□ 0.2
COL5A1-208ENST00000618395 CFLARO15519 480 aa16.29■□□□□ 0.2
COL5A1-208ENST00000618395 TMEM132EQ6IEE7 984 aa16.29■□□□□ 0.2
COL5A1-208ENST00000618395 RAPH1Q70E73 1250 aa16.29■□□□□ 0.2
COL5A1-208ENST00000618395 CRNKL1Q9BZJ0 848 aaKnown RBP16.29■□□□□ 0.2
COL5A1-208ENST00000618395 CC2D2BQ6DHV5 1058 aa16.29■□□□□ 0.2
COL5A1-208ENST00000618395 HINFPQ9BQA5 517 aa16.29■□□□□ 0.2
COL5A1-208ENST00000618395 C2orf54Q08AI8 447 aa16.29■□□□□ 0.2
COL5A1-208ENST00000618395 TBC1D10BQ4KMP7 808 aaPredicted RBP16.29■□□□□ 0.2
COL5A1-208ENST00000618395 LUZP2Q86TE4 346 aa16.29■□□□□ 0.2
COL5A1-208ENST00000618395 NSMCE1Q8WV22 266 aa16.29■□□□□ 0.2
COL5A1-208ENST00000618395 DCDC2Q9UHG0 476 aa16.29■□□□□ 0.2
COL5A1-208ENST00000618395 TPCN1Q9ULQ1 816 aa16.29■□□□□ 0.2
COL5A1-208ENST00000618395 CHMP2BQ9UQN3 213 aa16.29■□□□□ 0.2
COL5A1-208ENST00000618395 ATP2B3Q16720 1220 aa16.29■□□□□ 0.2
COL5A1-208ENST00000618395 MAML3Q96JK9 1138 aa16.29■□□□□ 0.2
COL5A1-208ENST00000618395 TNNC2P02585 160 aa16.29■□□□□ 0.2
COL5A1-208ENST00000618395 ARL10Q8N8L6 244 aa16.29■□□□□ 0.2
COL5A1-208ENST00000618395 ASZ1Q8WWH4 475 aa16.29■□□□□ 0.2
COL5A1-208ENST00000618395 FTOQ9C0B1 505 aaKnown RBP eCLIP16.29■□□□□ 0.2
COL5A1-208ENST00000618395 KLHL25Q9H0H3 589 aa16.29■□□□□ 0.2
COL5A1-208ENST00000618395 ZMYND8Q9ULU4 1186 aaPredicted RBP16.29■□□□□ 0.2
COL5A1-208ENST00000618395 PLD3Q8IV08 490 aa16.29■□□□□ 0.2
COL5A1-208ENST00000618395 RAD21L1Q9H4I0 556 aa16.29■□□□□ 0.2
COL5A1-208ENST00000618395 RAB20Q9NX57 234 aa16.29■□□□□ 0.2
COL5A1-208ENST00000618395 TBK1Q9UHD2 729 aa16.29■□□□□ 0.2
COL5A1-208ENST00000618395 CDV3Q9UKY7 258 aaKnown RBP16.29■□□□□ 0.2
COL5A1-208ENST00000618395 TRIM33Q9UPN9 1127 aa16.29■□□□□ 0.2
COL5A1-208ENST00000618395 ZNF148Q9UQR1 794 aa16.29■□□□□ 0.2
COL5A1-208ENST00000618395 HFM1A2PYH4 1435 aa16.29■□□□□ 0.2
COL5A1-208ENST00000618395 ACTN1P12814 892 aa16.28■□□□□ 0.2
COL5A1-208ENST00000618395 CCND1P24385 295 aa16.28■□□□□ 0.2
COL5A1-208ENST00000618395 ANKIB1Q9P2G1 1089 aa16.28■□□□□ 0.2
COL5A1-208ENST00000618395 MED21Q13503 144 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms