RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 MARCH6O60337 910 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 ATP6V1G1O75348 118 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 PRPF40AO75400 957 aaKnown RBP3.96□□□□□ -1.78
SMC5-204ENST00000618375 RPLP1P05386 114 aaKnown RBP3.96□□□□□ -1.78
SMC5-204ENST00000618375 VIL1P09327 827 aaKnown RBP3.96□□□□□ -1.78
SMC5-204ENST00000618375 HOXD8P13378 290 aaPredicted RBP3.96□□□□□ -1.78
SMC5-204ENST00000618375 KCNA2P16389 499 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 ZFXP17010 805 aaPredicted RBP3.96□□□□□ -1.78
SMC5-204ENST00000618375 DESP17661 470 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 PTPRAP18433 802 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 FSTP19883 344 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 ARHGAP25P42331 645 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 RANBP1P43487 201 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 FNTAP49354 379 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 GNAI1P63096 354 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 TUBB4BP68371 445 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 DCTN1Q14203 1278 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 DUOXA2Q1HG44 320 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 INF2Q27J81 1249 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 TUBB8Q3ZCM7 444 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 FAM26DQ5JW98 314 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 AKNAD1Q5T1N1 836 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 ZFYVE27Q5T4F4 411 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 COL13A1Q5TAT6 717 aaPredicted RBP3.96□□□□□ -1.78
SMC5-204ENST00000618375 ZSCAN25Q6NSZ9 544 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 SEPT14Q6ZU15 432 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 ILDR2Q71H61 639 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 ATCAYQ86WG3 371 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 KIAA0825Q8IV33 1275 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 CCDC65Q8IXS2 484 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 GALNT15Q8N3T1 639 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 MIGA1Q8NAN2 632 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 ATP11CQ8NB49 1132 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 LMBR1Q8WVP7 490 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 CCDC47Q96A33 483 aaKnown RBP3.96□□□□□ -1.78
SMC5-204ENST00000618375 RBM41Q96IZ5 413 aaKnown RBP3.96□□□□□ -1.78
SMC5-204ENST00000618375 ANKRD27Q96NW4 1050 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 PSMG3-AS1Q96PY0 264 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 GORASP1Q9BQQ3 440 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 FUT8Q9BYC5 575 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 ELP3Q9H9T3 547 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 HOXC10Q9NYD6 342 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 SWAP70Q9UH65 585 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 DNAI1Q9UI46 699 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 GGA2Q9UJY4 613 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 RNF112Q9ULX5 631 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 ZNF510Q9Y2H8 683 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 TMED5Q9Y3A6 229 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 PCDHGC5Q9Y5F6 944 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.96□□□□□ -1.781e-7■□□□□ 11.2
SMC5-204ENST00000618375 AQRO60306 1485 aaKnown RBP eCLIP3.96□□□□□ -1.78
SMC5-204ENST00000618375 ERCC6Q03468 1493 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 FANCD2Q9BXW9 1451 aa3.96□□□□□ -1.78
SMC5-204ENST00000618375 UHRF1BP1Q6BDS2 1440 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 FGD6Q6ZV73 1430 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 PLA2R1Q13018 1463 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 USP47Q96K76 1375 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 TMEM221A6NGB7 291 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 ARID3CA6NKF2 412 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.95□□□□□ -1.78
SMC5-204ENST00000618375 EBAG9O00559 213 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 FSCN2O14926 492 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 ZBTB39O15060 712 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 KIF3BO15066 747 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 GSC2O15499 205 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 MYO1BO43795 1136 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 CREB3O43889 395 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 RNF8O76064 485 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 TRIM37O94972 964 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 LUC7L3O95232 432 aaKnown RBP3.95□□□□□ -1.78
SMC5-204ENST00000618375 TUBBP07437 444 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 XBP1P17861 261 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 CES1P23141 567 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 PTGS1P23219 599 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 MCM3P25205 808 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 HOXD10P28358 340 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 SSTR4P31391 388 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 AMPHP49418 695 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 LIG3P49916 1009 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 PAPOLAP51003 745 aaKnown RBP3.95□□□□□ -1.78
SMC5-204ENST00000618375 SH3BGRP55822 239 aaPredicted RBP3.95□□□□□ -1.78
SMC5-204ENST00000618375 PHEXP78562 749 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 SLC7A5Q01650 507 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 LMNB2Q03252 620 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 ADCY1Q08828 1119 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 APOBRQ0VD83 1088 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 MPP3Q13368 585 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 MYBPC3Q14896 1274 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 NAA25Q14CX7 972 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 Q4G0T1 1027 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 CEP85LQ5SZL2 805 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 FBXW10Q5XX13 1052 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 CAPRIN2Q6IMN6 1127 aaKnown RBP3.95□□□□□ -1.78
SMC5-204ENST00000618375 PDE12Q6L8Q7 609 aaKnown RBP3.95□□□□□ -1.78
SMC5-204ENST00000618375 CWC27Q6UX04 472 aaKnown RBP3.95□□□□□ -1.78
SMC5-204ENST00000618375 LCA5Q86VQ0 697 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 PLA2G4DQ86XP0 818 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 DZIP1LQ8IYY4 767 aaKnown RBP3.95□□□□□ -1.78
SMC5-204ENST00000618375 TRIM58Q8NG06 486 aa3.95□□□□□ -1.78
SMC5-204ENST00000618375 NUP133Q8WUM0 1156 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms