RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 CNTN2Q02246 1040 aa29.03■■■□□ 2.24
PMS1-220ENST00000618056 TMEM87BQ96K49 555 aa29.03■■■□□ 2.24
PMS1-220ENST00000618056 SNAI1O95863 264 aaPredicted RBP29.02■■■□□ 2.24
PMS1-220ENST00000618056 TMTC2Q8N394 836 aa29.02■■■□□ 2.24
PMS1-220ENST00000618056 CLEC4DQ8WXI8 215 aa29.02■■■□□ 2.24
PMS1-220ENST00000618056 JMJD4Q9H9V9 463 aa29.02■■■□□ 2.24
PMS1-220ENST00000618056 NFIBO00712 420 aa29.01■■■□□ 2.23
PMS1-220ENST00000618056 ZNF865P0CJ78 1059 aaPredicted RBP29.01■■■□□ 2.23
PMS1-220ENST00000618056 COL9A3Q14050 684 aaPredicted RBP29.01■■■□□ 2.23
PMS1-220ENST00000618056 NSMFQ6X4W1 530 aa29.01■■■□□ 2.23
PMS1-220ENST00000618056 CATIPQ7Z7H3 387 aa29.01■■■□□ 2.23
PMS1-220ENST00000618056 SH2B2O14492 632 aaPredicted RBP29■■■□□ 2.23
PMS1-220ENST00000618056 LIFRP42702 1097 aa29■■■□□ 2.23
PMS1-220ENST00000618056 PRPF38BQ5VTL8 546 aaKnown RBP29■■■□□ 2.23
PMS1-220ENST00000618056 MTMR8Q96EF0 704 aa29■■■□□ 2.23
PMS1-220ENST00000618056 MAF1Q9H063 256 aa29■■■□□ 2.23
PMS1-220ENST00000618056 SOWAHBA6NEL2 793 aa28.99■■■□□ 2.23
PMS1-220ENST00000618056 DHX16O60231 1041 aaKnown RBP28.99■■■□□ 2.23
PMS1-220ENST00000618056 QRICH1Q2TAL8 776 aa28.99■■■□□ 2.23
PMS1-220ENST00000618056 ARMCX2Q7L311 632 aa28.99■■■□□ 2.23
PMS1-220ENST00000618056 RASEFQ8IZ41 740 aa28.99■■■□□ 2.23
PMS1-220ENST00000618056 MAP3K14Q99558 947 aa28.99■■■□□ 2.23
PMS1-220ENST00000618056 GPHNQ9NQX3 736 aaPredicted RBP28.99■■■□□ 2.23
PMS1-220ENST00000618056 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.99■■■□□ 2.23
PMS1-220ENST00000618056 DDAH1O94760 285 aa28.98■■■□□ 2.23
PMS1-220ENST00000618056 REC8O95072 547 aa28.98■■■□□ 2.23
PMS1-220ENST00000618056 KRT32Q14532 448 aa28.98■■■□□ 2.23
PMS1-220ENST00000618056 ZNF654Q8IZM8 581 aa28.98■■■□□ 2.23
PMS1-220ENST00000618056 KCNB2Q92953 911 aa28.98■■■□□ 2.23
PMS1-220ENST00000618056 NEK1Q96PY6 1258 aa28.98■■■□□ 2.23
PMS1-220ENST00000618056 ABHD16BQ9H3Z7 469 aa28.98■■■□□ 2.23
PMS1-220ENST00000618056 LRRC37A2A6NM11 1700 aa28.98■■■□□ 2.23
PMS1-220ENST00000618056 ASTN1O14525 1302 aa28.98■■■□□ 2.23
PMS1-220ENST00000618056 ASB14A6NK59 587 aa28.97■■■□□ 2.23
PMS1-220ENST00000618056 COL6A1P12109 1028 aa28.97■■■□□ 2.23
PMS1-220ENST00000618056 AKR1A1P14550 325 aa28.97■■■□□ 2.23
PMS1-220ENST00000618056 BAATQ14032 418 aaPredicted RBP28.97■■■□□ 2.23
PMS1-220ENST00000618056 USH1GQ495M9 461 aa28.97■■■□□ 2.23
PMS1-220ENST00000618056 CCDC144CPQ8IYA2 1237 aa28.97■■■□□ 2.23
PMS1-220ENST00000618056 RGS22Q8NE09 1264 aa28.97■■■□□ 2.23
PMS1-220ENST00000618056 C11orf49Q9H6J7 331 aa28.97■■■□□ 2.23
PMS1-220ENST00000618056 VAT1LQ9HCJ6 419 aa28.97■■■□□ 2.23
PMS1-220ENST00000618056 ABCB11O95342 1321 aa28.97■■■□□ 2.23
PMS1-220ENST00000618056 ARRDC4Q8NCT1 418 aa28.97■■■□□ 2.23
PMS1-220ENST00000618056 RIOX1Q9H6W3 641 aa28.97■■■□□ 2.23
PMS1-220ENST00000618056 EPB41L2O43491 1005 aaKnown RBP28.96■■■□□ 2.23
PMS1-220ENST00000618056 HSPA4P34932 840 aa28.96■■■□□ 2.23
PMS1-220ENST00000618056 ACVR2BQ13705 512 aa28.96■■■□□ 2.23
PMS1-220ENST00000618056 RNF207Q6ZRF8 634 aa28.96■■■□□ 2.23
PMS1-220ENST00000618056 FBXO11Q86XK2 927 aa28.96■■■□□ 2.23
PMS1-220ENST00000618056 KATNBL1Q9H079 304 aa28.96■■■□□ 2.23
PMS1-220ENST00000618056 ADD3Q9UEY8 706 aaKnown RBP28.96■■■□□ 2.23
PMS1-220ENST00000618056 LOC102724159A0A0B4J2E5 919 aa28.95■■■□□ 2.22
PMS1-220ENST00000618056 PTPDC1A2A3K4 754 aa28.95■■■□□ 2.22
PMS1-220ENST00000618056 DNM1LO00429 736 aa28.95■■■□□ 2.22
PMS1-220ENST00000618056 ZBTB5O15062 677 aa28.95■■■□□ 2.22
PMS1-220ENST00000618056 RARBP10826 455 aa28.95■■■□□ 2.22
PMS1-220ENST00000618056 PWP2Q15269 919 aaKnown RBP28.95■■■□□ 2.22
PMS1-220ENST00000618056 SLC35G1Q2M3R5 365 aa28.95■■■□□ 2.22
PMS1-220ENST00000618056 ADCK5Q3MIX3 580 aa28.95■■■□□ 2.22
PMS1-220ENST00000618056 ANO1Q5XXA6 986 aa28.95■■■□□ 2.22
PMS1-220ENST00000618056 DPF3Q92784 378 aa28.95■■■□□ 2.22
PMS1-220ENST00000618056 CCDC69A6NI79 296 aa28.94■■■□□ 2.22
PMS1-220ENST00000618056 RPS6P62753 249 aaKnown RBP28.94■■■□□ 2.22
PMS1-220ENST00000618056 EXOSC10Q01780 885 aaKnown RBP28.94■■■□□ 2.22
PMS1-220ENST00000618056 SLC30A10Q6XR72 485 aa28.94■■■□□ 2.22
PMS1-220ENST00000618056 NFXL1Q6ZNB6 911 aa28.94■■■□□ 2.22
PMS1-220ENST00000618056 DHX32Q7L7V1 743 aaKnown RBP28.94■■■□□ 2.22
PMS1-220ENST00000618056 SGMS1Q86VZ5 419 aa28.94■■■□□ 2.22
PMS1-220ENST00000618056 MORC4Q8TE76 937 aa28.94■■■□□ 2.22
PMS1-220ENST00000618056 NUP133Q8WUM0 1156 aa28.94■■■□□ 2.22
PMS1-220ENST00000618056 AMNQ9BXJ7 453 aa28.94■■■□□ 2.22
PMS1-220ENST00000618056 ZHX1Q9UKY1 873 aaPredicted RBP28.94■■■□□ 2.22
PMS1-220ENST00000618056 FAM184BQ9ULE4 1060 aa28.94■■■□□ 2.22
PMS1-220ENST00000618056 KIF5BP33176 963 aa28.93■■■□□ 2.22
PMS1-220ENST00000618056 CTCFLQ8NI51 663 aaPredicted RBP28.93■■■□□ 2.22
PMS1-220ENST00000618056 PURBQ96QR8 312 aaKnown RBP28.93■■■□□ 2.22
PMS1-220ENST00000618056 CYTH3O43739 400 aa28.92■■■□□ 2.22
PMS1-220ENST00000618056 HMGB1P09429 215 aaKnown RBP28.92■■■□□ 2.22
PMS1-220ENST00000618056 MYL10Q9BUA6 226 aa28.92■■■□□ 2.22
PMS1-220ENST00000618056 LRRC2Q9BYS8 371 aa28.92■■■□□ 2.22
PMS1-220ENST00000618056 MRPL11Q9Y3B7 192 aaKnown RBP28.92■■■□□ 2.22
PMS1-220ENST00000618056 CALM1P0DP23 149 aa28.91■■■□□ 2.22
PMS1-220ENST00000618056 CALM2P0DP24 149 aa28.91■■■□□ 2.22
PMS1-220ENST00000618056 CALM3P0DP25 149 aa28.91■■■□□ 2.22
PMS1-220ENST00000618056 CALML3P27482 149 aa28.91■■■□□ 2.22
PMS1-220ENST00000618056 SMARCA1P28370 1054 aa28.91■■■□□ 2.22
PMS1-220ENST00000618056 ALDH5A1P51649 535 aaPredicted RBP28.91■■■□□ 2.22
PMS1-220ENST00000618056 CCDC144BQ3MJ40 725 aa28.91■■■□□ 2.22
PMS1-220ENST00000618056 XPNPEP3Q9NQH7 507 aa28.91■■■□□ 2.22
PMS1-220ENST00000618056 TRAF1Q13077 416 aa28.91■■■□□ 2.22
PMS1-220ENST00000618056 LRRC41Q15345 812 aa28.91■■■□□ 2.22
PMS1-220ENST00000618056 GJC2Q5T442 439 aaPredicted RBP28.91■■■□□ 2.22
PMS1-220ENST00000618056 MCF2L2Q86YR7 1114 aa28.91■■■□□ 2.22
PMS1-220ENST00000618056 DNERQ8NFT8 737 aa28.91■■■□□ 2.22
PMS1-220ENST00000618056 SPZ1Q9BXG8 430 aa28.91■■■□□ 2.22
PMS1-220ENST00000618056 SLC12A7Q9Y666 1083 aa28.91■■■□□ 2.22
PMS1-220ENST00000618056 PPP1R11O60927 126 aaPredicted RBP28.9■■■□□ 2.22
PMS1-220ENST00000618056 DUSP11O75319 330 aaKnown RBP28.9■■■□□ 2.22
PMS1-220ENST00000618056 PIGSQ96S52 555 aa28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms