RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 RPAP1Q9BWH6 1393 aaPredicted RBP11.24□□□□□ -0.61
CUL4A-212ENST00000617546 TXNDC9O14530 226 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 MEFVO15553 781 aaPredicted RBP11.24□□□□□ -0.61
CUL4A-212ENST00000617546 OR52Z1P0C646 297 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 PDE6CP51160 858 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 NYAP1Q6ZVC0 841 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 ACRBPQ8NEB7 543 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 ZBTB9Q96C00 473 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 ATG3Q9NT62 314 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 PCDHA13Q9Y5I0 950 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 ZNF532Q9HCE3 1301 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 MMP1P03956 469 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 ATF2P15336 505 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 GJC1P36383 396 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 TXKP42681 527 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 PSMC4P43686 418 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 SMTNP53814 917 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 SLC39A6Q13433 755 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 TEX9Q8N6V9 391 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 PPP4R1Q8TF05 950 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 GFM2Q969S9 779 aaKnown RBP11.24□□□□□ -0.61
CUL4A-212ENST00000617546 ARMCX3Q9UH62 379 aaPredicted RBP11.24□□□□□ -0.61
CUL4A-212ENST00000617546 TPX2Q9ULW0 747 aaKnown RBP11.24□□□□□ -0.61
CUL4A-212ENST00000617546 BUB1O43683 1085 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 STK10O94804 968 aaKnown RBP11.24□□□□□ -0.61
CUL4A-212ENST00000617546 TBC1D8O95759 1140 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 GGCXP38435 758 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 RCAN1P53805 252 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 NR1H3Q13133 447 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 TCP11X2Q5H9J9 407 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 ST13P4Q8IZP2 240 aaPredicted RBP11.24□□□□□ -0.61
CUL4A-212ENST00000617546 PGBD1Q96JS3 809 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 L2HGDHQ9H9P8 463 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 PCDH11XQ9BZA7 1347 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 PCDH11YQ9BZA8 1340 aa11.24□□□□□ -0.61
CUL4A-212ENST00000617546 HSPA1LP34931 641 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 ARL6IP4Q66PJ3 421 aaKnown RBP11.23□□□□□ -0.61
CUL4A-212ENST00000617546 MB21D1Q8N884 522 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 MGARPQ8TDB4 240 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 ZSCAN10Q96SZ4 725 aaPredicted RBP11.23□□□□□ -0.61
CUL4A-212ENST00000617546 VPS37BQ9H9H4 285 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 NLRC4Q9NPP4 1024 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 VPS54Q9P1Q0 977 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 SERPINA10Q9UK55 444 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 ENC1O14682 589 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 MAPK13O15264 365 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 PPARAQ07869 468 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 UAP1Q16222 522 aaPredicted RBP11.23□□□□□ -0.61
CUL4A-212ENST00000617546 NLRP14Q86W24 1093 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 NME8Q8N427 588 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 MIGA1Q8NAN2 632 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 STK17AQ9UEE5 414 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 ADGRG1Q9Y653 693 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 HNRNPCL1O60812 293 aaKnown RBP11.23□□□□□ -0.61
CUL4A-212ENST00000617546 SCG2P13521 617 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 IFNAR1P17181 557 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 CCNE1P24864 410 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 SOS2Q07890 1332 aaPredicted RBP11.23□□□□□ -0.61
CUL4A-212ENST00000617546 LRIG3Q6UXM1 1119 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 DZIP3Q86Y13 1208 aaKnown RBP11.23□□□□□ -0.61
CUL4A-212ENST00000617546 SPATA5Q8NB90 893 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 FAM81BQ96LP2 452 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 MTA3Q9BTC8 594 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 MOV10L1Q9BXT6 1211 aaKnown RBP11.23□□□□□ -0.61
CUL4A-212ENST00000617546 ABHD10Q9NUJ1 306 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 BTBD18B2RXH4 712 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 LARGE1O95461 756 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 RASSF7Q02833 373 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 EHHADHQ08426 723 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 MKRN3Q13064 507 aaKnown RBP11.23□□□□□ -0.61
CUL4A-212ENST00000617546 ZNF827Q17R98 1081 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 MEX3CQ5U5Q3 659 aaKnown RBP11.23□□□□□ -0.61
CUL4A-212ENST00000617546 TRIM11Q96F44 468 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 DPH5Q9H2P9 285 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 ATP8A2Q9NTI2 1148 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 IQGAP3Q86VI3 1631 aa11.23□□□□□ -0.61
CUL4A-212ENST00000617546 ANKRD20A4Q4UJ75 823 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 ANKRD20A8PQ5CZ79 823 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 ANKRD20A2Q5SQ80 823 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 ANKRD20A1Q5TYW2 823 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 TOGARAM2Q6ZUX3 1019 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 APBB1IPQ7Z5R6 666 aaPredicted RBP11.22□□□□□ -0.61
CUL4A-212ENST00000617546 ELOA2Q8IYF1 753 aaPredicted RBP11.22□□□□□ -0.61
CUL4A-212ENST00000617546 NFATC2IPQ8NCF5 419 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 CFAP61Q8NHU2 1237 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 PSMD1Q99460 953 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 FGAP02671 866 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 ITGA6P23229 1130 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 ZAP70P43403 619 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 GRAMD1AQ96CP6 724 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 SLC52A2Q9HAB3 445 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 STOML1Q9UBI4 398 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 ADGRL3Q9HAR2 1447 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 B4DLN1 442 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 hCG_1984214I3L0E3 225 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 PODXLO00592 558 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 TTC19Q6DKK2 380 aaPredicted RBP11.22□□□□□ -0.61
CUL4A-212ENST00000617546 NCAPH2Q6IBW4 605 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 APOA5Q6Q788 366 aa11.22□□□□□ -0.61
CUL4A-212ENST00000617546 ZNF713Q8N859 430 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms