RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 RABGGTBP53611 331 aa10.16□□□□□ -0.78
GPC6-202ENST00000617456 CCL23P55773 120 aa10.16□□□□□ -0.78
GPC6-202ENST00000617456 GJA9P57773 515 aa10.16□□□□□ -0.78
GPC6-202ENST00000617456 SETQ01105 290 aaPredicted RBP10.16□□□□□ -0.78
GPC6-202ENST00000617456 SBK1Q52WX2 424 aa10.16□□□□□ -0.78
GPC6-202ENST00000617456 CTR9Q6PD62 1173 aa10.16□□□□□ -0.78
GPC6-202ENST00000617456 ARMCX2Q7L311 632 aa10.16□□□□□ -0.78
GPC6-202ENST00000617456 OTOP2Q7RTS6 562 aa10.16□□□□□ -0.78
GPC6-202ENST00000617456 ANKRD35Q8N283 1001 aa10.16□□□□□ -0.78
GPC6-202ENST00000617456 KBTBD3Q8NAB2 608 aa10.16□□□□□ -0.78
GPC6-202ENST00000617456 HERVK_113Q902F9 699 aa10.16□□□□□ -0.78
GPC6-202ENST00000617456 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.16□□□□□ -0.78
GPC6-202ENST00000617456 UPF3AQ9H1J1 476 aaKnown RBP10.16□□□□□ -0.78
GPC6-202ENST00000617456 MTIF3Q9H2K0 278 aaKnown RBP10.16□□□□□ -0.78
GPC6-202ENST00000617456 ABHD16BQ9H3Z7 469 aa10.16□□□□□ -0.78
GPC6-202ENST00000617456 HIPK3Q9H422 1215 aa10.16□□□□□ -0.78
GPC6-202ENST00000617456 UMODL1Q5DID0 1318 aa10.15□□□□□ -0.78
GPC6-202ENST00000617456 ZBBXA8MT70 800 aa10.15□□□□□ -0.78
GPC6-202ENST00000617456 F5H6K3 240 aa10.15□□□□□ -0.78
GPC6-202ENST00000617456 MYOGP15173 224 aa10.15□□□□□ -0.78
GPC6-202ENST00000617456 KLRC3Q07444 240 aa10.15□□□□□ -0.78
GPC6-202ENST00000617456 SKIV2LQ15477 1246 aaKnown RBP10.15□□□□□ -0.78
GPC6-202ENST00000617456 CXCL17Q6UXB2 119 aa10.15□□□□□ -0.78
GPC6-202ENST00000617456 ZNF467Q7Z7K2 595 aaPredicted RBP10.15□□□□□ -0.78
GPC6-202ENST00000617456 PRPF38AQ8NAV1 312 aaKnown RBP10.15□□□□□ -0.78
GPC6-202ENST00000617456 FGD4Q96M96 766 aa10.15□□□□□ -0.78
GPC6-202ENST00000617456 TSPYL2Q9H2G4 693 aaPredicted RBP10.15□□□□□ -0.78
GPC6-202ENST00000617456 MKNK2Q9HBH9 465 aa10.15□□□□□ -0.78
GPC6-202ENST00000617456 ZNF287Q9HBT7 754 aa10.15□□□□□ -0.78
GPC6-202ENST00000617456 HOMER2Q9NSB8 354 aa10.15□□□□□ -0.78
GPC6-202ENST00000617456 ARPP21Q9UBL0 812 aaPredicted RBP10.15□□□□□ -0.78
GPC6-202ENST00000617456 ISY1Q9ULR0 285 aaKnown RBP10.15□□□□□ -0.78
GPC6-202ENST00000617456 SYNPO2Q9UMS6 1093 aa10.15□□□□□ -0.78
GPC6-202ENST00000617456 TCF20Q9UGU0 1960 aaKnown RBP10.15□□□□□ -0.78
GPC6-202ENST00000617456 MCM3APO60318 1980 aa10.14□□□□□ -0.79
GPC6-202ENST00000617456 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.14□□□□□ -0.79
GPC6-202ENST00000617456 CTAGE5O15320 804 aa10.14□□□□□ -0.79
GPC6-202ENST00000617456 CD4P01730 458 aa10.14□□□□□ -0.79
GPC6-202ENST00000617456 PTGS1P23219 599 aa10.14□□□□□ -0.79
GPC6-202ENST00000617456 CNTN2Q02246 1040 aa10.14□□□□□ -0.79
GPC6-202ENST00000617456 TFF2Q03403 129 aa10.14□□□□□ -0.79
GPC6-202ENST00000617456 PPP2R2DQ66LE6 453 aa10.14□□□□□ -0.79
GPC6-202ENST00000617456 CCDC144CPQ8IYA2 1237 aa10.14□□□□□ -0.79
GPC6-202ENST00000617456 CHMP4CQ96CF2 233 aa10.14□□□□□ -0.79
GPC6-202ENST00000617456 STRBPQ96SI9 672 aaKnown RBP10.14□□□□□ -0.79
GPC6-202ENST00000617456 TRPV6Q9H1D0 765 aa10.14□□□□□ -0.79
GPC6-202ENST00000617456 CLIP2Q9UDT6 1046 aa10.14□□□□□ -0.79
GPC6-202ENST00000617456 CHD7Q9P2D1 2997 aa10.14□□□□□ -0.79
GPC6-202ENST00000617456 PRRC2BQ5JSZ5 2229 aaKnown RBP10.13□□□□□ -0.79
GPC6-202ENST00000617456 MINDY4BA8MYZ0 360 aa10.13□□□□□ -0.79
GPC6-202ENST00000617456 RNF113AO15541 343 aaKnown RBP10.13□□□□□ -0.79
GPC6-202ENST00000617456 DYNC1LI2O43237 492 aaPredicted RBP10.13□□□□□ -0.79
GPC6-202ENST00000617456 RASA1P20936 1047 aa10.13□□□□□ -0.79
GPC6-202ENST00000617456 KCNQ1P51787 676 aa10.13□□□□□ -0.79
GPC6-202ENST00000617456 PSMC6P62333 389 aa10.13□□□□□ -0.79
GPC6-202ENST00000617456 TNFAIP2Q03169 654 aa10.13□□□□□ -0.79
GPC6-202ENST00000617456 ITGA7Q13683 1181 aa10.13□□□□□ -0.79
GPC6-202ENST00000617456 CHST13Q8NET6 341 aa10.13□□□□□ -0.79
GPC6-202ENST00000617456 APPBP2Q92624 585 aa10.13□□□□□ -0.79
GPC6-202ENST00000617456 ANP32BQ92688 251 aaKnown RBP10.13□□□□□ -0.79
GPC6-202ENST00000617456 PUS7LQ9H0K6 701 aaKnown RBP10.13□□□□□ -0.79
GPC6-202ENST00000617456 AP5M1Q9H0R1 490 aa10.13□□□□□ -0.79
GPC6-202ENST00000617456 CERS4Q9HA82 394 aa10.13□□□□□ -0.79
GPC6-202ENST00000617456 SLC38A10Q9HBR0 1119 aa10.13□□□□□ -0.79
GPC6-202ENST00000617456 NYAP2Q9P242 653 aa10.13□□□□□ -0.79
GPC6-202ENST00000617456 FBXO40Q9UH90 709 aa10.13□□□□□ -0.79
GPC6-202ENST00000617456 FEM1BQ9UK73 627 aa10.13□□□□□ -0.79
GPC6-202ENST00000617456 SLC4A7Q9Y6M7 1214 aa10.13□□□□□ -0.79
GPC6-202ENST00000617456 DDX49Q9Y6V7 483 aaKnown RBP10.13□□□□□ -0.79
GPC6-202ENST00000617456 ASTN1O14525 1302 aa10.12□□□□□ -0.79
GPC6-202ENST00000617456 RFXAPO00287 272 aa10.12□□□□□ -0.79
GPC6-202ENST00000617456 ATP2A1O14983 1001 aa10.12□□□□□ -0.79
GPC6-202ENST00000617456 B4GALT4O60513 344 aa10.12□□□□□ -0.79
GPC6-202ENST00000617456 BMP1P13497 986 aa10.12□□□□□ -0.79
GPC6-202ENST00000617456 RRP1P56182 461 aaKnown RBP10.12□□□□□ -0.79
GPC6-202ENST00000617456 HDAC1Q13547 482 aaPredicted RBP10.12□□□□□ -0.79
GPC6-202ENST00000617456 FSCN1Q16658 493 aaKnown RBP10.12□□□□□ -0.79
GPC6-202ENST00000617456 PPP4R3BQ5MIZ7 849 aa10.12□□□□□ -0.79
GPC6-202ENST00000617456 EEPD1Q7L9B9 569 aa10.12□□□□□ -0.79
GPC6-202ENST00000617456 TLK2Q86UE8 772 aa10.12□□□□□ -0.79
GPC6-202ENST00000617456 LRRC47Q8N1G4 583 aaKnown RBP10.12□□□□□ -0.79
GPC6-202ENST00000617456 SCLYQ96I15 445 aa10.12□□□□□ -0.79
GPC6-202ENST00000617456 NOC4LQ9BVI4 516 aaKnown RBP10.12□□□□□ -0.79
GPC6-202ENST00000617456 KATNBL1Q9H079 304 aa10.12□□□□□ -0.79
GPC6-202ENST00000617456 WNT8AQ9H1J5 351 aa10.12□□□□□ -0.79
GPC6-202ENST00000617456 GRIN2DO15399 1336 aa10.11□□□□□ -0.79
GPC6-202ENST00000617456 GSG1L2A8MUP6 293 aa10.11□□□□□ -0.79
GPC6-202ENST00000617456 PATL2C9JE40 543 aaKnown RBP10.11□□□□□ -0.79
GPC6-202ENST00000617456 ZEB2O60315 1214 aa10.11□□□□□ -0.79
GPC6-202ENST00000617456 PRDM1O75626 825 aa10.11□□□□□ -0.79
GPC6-202ENST00000617456 CABYRO75952 493 aa10.11□□□□□ -0.79
GPC6-202ENST00000617456 ATP2A2P16615 1042 aaKnown RBP10.11□□□□□ -0.79
GPC6-202ENST00000617456 SMPD1P17405 629 aa10.11□□□□□ -0.79
GPC6-202ENST00000617456 IKQ13123 557 aaPredicted RBP10.11□□□□□ -0.79
GPC6-202ENST00000617456 AAK1Q2M2I8 961 aa10.11□□□□□ -0.79
GPC6-202ENST00000617456 SLFN13Q68D06 897 aa10.11□□□□□ -0.79
GPC6-202ENST00000617456 DEFB128Q7Z7B8 93 aa10.11□□□□□ -0.79
GPC6-202ENST00000617456 FBXO16Q8IX29 292 aaPredicted RBP10.11□□□□□ -0.79
GPC6-202ENST00000617456 RPUSD2Q8IZ73 545 aaKnown RBP10.11□□□□□ -0.79
GPC6-202ENST00000617456 SLC43A3Q8NBI5 491 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms