RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-222ENST00000617185 ZIM3Q96PE6 472 aa12.83□□□□□ -0.36
TP53-222ENST00000617185 INCENPQ9NQS7 918 aa12.83□□□□□ -0.36
TP53-222ENST00000617185 PCDHGA4Q9Y5G9 962 aa12.83□□□□□ -0.36
TP53-222ENST00000617185 SH3TC1Q8TE82 1336 aa12.83□□□□□ -0.36
TP53-222ENST00000617185 RIC1Q4ADV7 1423 aa12.83□□□□□ -0.36
TP53-222ENST00000617185 CARMIL3Q8ND23 1372 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 TEX33O43247 280 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 SRGAP2O75044 1071 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 GNAT1P11488 350 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 BMP6P22004 513 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 CASP14P31944 242 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 GLE1Q53GS7 698 aaKnown RBP12.82□□□□□ -0.36
TP53-222ENST00000617185 CAVIN3Q969G5 261 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 GPR108Q9NPR9 543 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 CCDC87Q9NVE4 849 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 KRT14P02533 472 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 SLC9C2Q5TAH2 1124 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 CCDC102BQ68D86 513 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 METTL16Q86W50 562 aaKnown RBP12.82□□□□□ -0.36
TP53-222ENST00000617185 GALNT15Q8N3T1 639 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 JAKMIP2Q96AA8 810 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 KDM4CQ9H3R0 1056 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 HAUS4Q9H6D7 363 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 PIH1D3Q9NQM4 214 aaKnown RBP12.82□□□□□ -0.36
TP53-222ENST00000617185 SLIT2O94813 1529 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 ZMYM6O95789 1325 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 PALLDQ8WX93 1383 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 GMNCA6NCL1 334 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 PDE8AO60658 829 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 SMIM24O75264 130 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 KIF4AO95239 1232 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 FGAP02671 866 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 HMGB1P09429 215 aaKnown RBP12.82□□□□□ -0.36
TP53-222ENST00000617185 IL6STP40189 918 aaPredicted RBP12.82□□□□□ -0.36
TP53-222ENST00000617185 FMR1Q06787 632 aaKnown RBP eCLIP12.82□□□□□ -0.36
TP53-222ENST00000617185 PPP1R7Q15435 360 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 GNPTABQ3T906 1256 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 CCDC38Q502W7 563 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 ARMC9Q7Z3E5 817 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 SDCCAG8Q86SQ7 713 aaPredicted RBP12.82□□□□□ -0.36
TP53-222ENST00000617185 FOXP4Q8IVH2 680 aaPredicted RBP12.82□□□□□ -0.36
TP53-222ENST00000617185 MMGT1Q8N4V1 131 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 ARFGAP2Q8N6H7 521 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 C1orf131Q8NDD1 294 aaKnown RBP12.82□□□□□ -0.36
TP53-222ENST00000617185 HVCN1Q96D96 273 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 PLEKHG4BQ96PX9 1271 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 MMTAG2Q9BU76 263 aaKnown RBP12.82□□□□□ -0.36
TP53-222ENST00000617185 PPANQ9NQ55 473 aaKnown RBP12.82□□□□□ -0.36
TP53-222ENST00000617185 HELLSQ9NRZ9 838 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 SAMSN1Q9NSI8 373 aaKnown RBP12.82□□□□□ -0.36
TP53-222ENST00000617185 ZFATQ9P243 1243 aa12.82□□□□□ -0.36
TP53-222ENST00000617185 DOT1LQ8TEK3 1739 aa12.81□□□□□ -0.36
TP53-222ENST00000617185 ATP4AP20648 1035 aa12.81□□□□□ -0.36
TP53-222ENST00000617185 PBX1P40424 430 aa12.81□□□□□ -0.36
TP53-222ENST00000617185 ERVK-24P63145 666 aa12.81□□□□□ -0.36
TP53-222ENST00000617185 CACNA2D3Q8IZS8 1091 aa12.81□□□□□ -0.36
TP53-222ENST00000617185 NGLY1Q96IV0 654 aa12.81□□□□□ -0.36
TP53-222ENST00000617185 SLF1Q9BQI6 1058 aa12.81□□□□□ -0.36
TP53-222ENST00000617185 SLC5A4Q9NY91 659 aa12.81□□□□□ -0.36
TP53-222ENST00000617185 G3BP2Q9UN86 482 aaKnown RBP12.81□□□□□ -0.36
TP53-222ENST00000617185 ZSCAN9O15535 394 aaPredicted RBP12.81□□□□□ -0.36
TP53-222ENST00000617185 GPAA1O43292 621 aa12.81□□□□□ -0.36
TP53-222ENST00000617185 RNF8O76064 485 aa12.81□□□□□ -0.36
TP53-222ENST00000617185 PDE8BO95263 885 aa12.81□□□□□ -0.36
TP53-222ENST00000617185 RXRAP19793 462 aa12.81□□□□□ -0.36
TP53-222ENST00000617185 CDC25CP30307 473 aa12.81□□□□□ -0.36
TP53-222ENST00000617185 SLC39A14Q15043 492 aa12.81□□□□□ -0.36
TP53-222ENST00000617185 LRRC23Q53EV4 343 aaPredicted RBP12.81□□□□□ -0.36
TP53-222ENST00000617185 TBC1D5Q92609 795 aa12.81□□□□□ -0.36
TP53-222ENST00000617185 CNKSR1Q969H4 720 aa12.81□□□□□ -0.36
TP53-222ENST00000617185 SEC16BQ96JE7 1060 aa12.81□□□□□ -0.36
TP53-222ENST00000617185 L3MBTL3Q96JM7 780 aaPredicted RBP12.81□□□□□ -0.36
TP53-222ENST00000617185 POLD4Q9HCU8 107 aa12.81□□□□□ -0.36
TP53-222ENST00000617185 GJB4Q9NTQ9 266 aa12.81□□□□□ -0.36
TP53-222ENST00000617185 COL14A1Q05707 1796 aaKnown RBP12.81□□□□□ -0.36
TP53-222ENST00000617185 FAM237AA0A1B0GTK4 181 aa12.8□□□□□ -0.36
TP53-222ENST00000617185 HMGB1P1B2RPK0 211 aaPredicted RBP12.8□□□□□ -0.36
TP53-222ENST00000617185 CTCFP49711 727 aaPredicted RBP12.8□□□□□ -0.36
TP53-222ENST00000617185 C2orf54Q08AI8 447 aa12.8□□□□□ -0.36
TP53-222ENST00000617185 MKRN4PQ13434 485 aaPredicted RBP12.8□□□□□ -0.36
TP53-222ENST00000617185 CFAP58Q5T655 872 aa12.8□□□□□ -0.36
TP53-222ENST00000617185 OTUD7BQ6GQQ9 843 aa12.8□□□□□ -0.36
TP53-222ENST00000617185 APLFQ8IW19 511 aaPredicted RBP12.8□□□□□ -0.36
TP53-222ENST00000617185 TRMT44Q8IYL2 757 aaKnown RBP12.8□□□□□ -0.36
TP53-222ENST00000617185 ZNF34Q8IZ26 560 aa12.8□□□□□ -0.36
TP53-222ENST00000617185 CTAGE1Q96RT6 745 aa12.8□□□□□ -0.36
TP53-222ENST00000617185 GORASP1Q9BQQ3 440 aa12.8□□□□□ -0.36
TP53-222ENST00000617185 BLOC1S6Q9UL45 172 aa12.8□□□□□ -0.36
TP53-222ENST00000617185 LEMD3Q9Y2U8 911 aa12.8□□□□□ -0.36
TP53-222ENST00000617185 L3MBTL1Q9Y468 752 aa12.8□□□□□ -0.36
TP53-222ENST00000617185 GYPCP04921 128 aa12.8□□□□□ -0.36
TP53-222ENST00000617185 MARCKSP29966 332 aaPredicted RBP12.8□□□□□ -0.36
TP53-222ENST00000617185 FXR1P51114 621 aaKnown RBP eCLIP12.8□□□□□ -0.36
TP53-222ENST00000617185 C3orf67Q6ZVT6 689 aa12.8□□□□□ -0.36
TP53-222ENST00000617185 DHX32Q7L7V1 743 aaKnown RBP12.8□□□□□ -0.36
TP53-222ENST00000617185 SLC51AQ86UW1 340 aa12.8□□□□□ -0.36
TP53-222ENST00000617185 CD302Q8IX05 232 aa12.8□□□□□ -0.36
TP53-222ENST00000617185 ELOA2Q8IYF1 753 aaPredicted RBP12.8□□□□□ -0.36
TP53-222ENST00000617185 CCT6BQ92526 530 aa12.8□□□□□ -0.36
TP53-222ENST00000617185 AIDAQ96BJ3 306 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms