RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 CCDC84Q86UT8 332 aaPredicted RBP10.77□□□□□ -0.69
TNFRSF9-204ENST00000615230 LPAR1Q92633 364 aa10.77□□□□□ -0.69
TNFRSF9-204ENST00000615230 ACCSQ96QU6 501 aa10.77□□□□□ -0.69
TNFRSF9-204ENST00000615230 FAM204AQ9H8W3 233 aa10.77□□□□□ -0.69
TNFRSF9-204ENST00000615230 UTYO14607 1347 aa10.77□□□□□ -0.69
TNFRSF9-204ENST00000615230 HOXC6P09630 235 aa10.77□□□□□ -0.69
TNFRSF9-204ENST00000615230 ZNF157P51786 506 aaPredicted RBP10.77□□□□□ -0.69
TNFRSF9-204ENST00000615230 GTF2A2P52657 109 aa10.77□□□□□ -0.69
TNFRSF9-204ENST00000615230 CCDC114Q96M63 670 aa10.77□□□□□ -0.69
TNFRSF9-204ENST00000615230 BCORL1Q5H9F3 1711 aa10.77□□□□□ -0.69
TNFRSF9-204ENST00000615230 NWD1Q149M9 1564 aa10.77□□□□□ -0.69
TNFRSF9-204ENST00000615230 ANXA13P27216 316 aa10.77□□□□□ -0.69
TNFRSF9-204ENST00000615230 HDLBPQ00341 1268 aaKnown RBP10.77□□□□□ -0.69
TNFRSF9-204ENST00000615230 ANO6Q4KMQ2 910 aa10.77□□□□□ -0.69
TNFRSF9-204ENST00000615230 LBHD1Q9BQE6 289 aaPredicted RBP10.77□□□□□ -0.69
TNFRSF9-204ENST00000615230 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.77□□□□□ -0.69
TNFRSF9-204ENST00000615230 TMEM131LA2VDJ0 1609 aa10.77□□□□□ -0.69
TNFRSF9-204ENST00000615230 TNS2Q63HR2 1409 aa10.77□□□□□ -0.69
TNFRSF9-204ENST00000615230 F8W8V4 182 aa10.77□□□□□ -0.69
TNFRSF9-204ENST00000615230 SLC25A27O95847 323 aa10.77□□□□□ -0.69
TNFRSF9-204ENST00000615230 FGAP02671 866 aa10.77□□□□□ -0.69
TNFRSF9-204ENST00000615230 HLFQ16534 295 aa10.77□□□□□ -0.69
TNFRSF9-204ENST00000615230 C1orf112Q9NSG2 853 aa10.77□□□□□ -0.69
TNFRSF9-204ENST00000615230 DACT1Q9NYF0 836 aa10.77□□□□□ -0.69
TNFRSF9-204ENST00000615230 SLC12A6Q9UHW9 1150 aa10.77□□□□□ -0.69
TNFRSF9-204ENST00000615230 ZHX2Q9Y6X8 837 aa10.77□□□□□ -0.69
TNFRSF9-204ENST00000615230 RICTORQ6R327 1708 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 FCGRTP55899 365 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 TNNC1P63316 161 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 PTPN12Q05209 780 aaKnown RBP10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 MYOCDQ8IZQ8 938 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 CSGALNACT2Q8N6G5 542 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 TRIML1Q8N9V2 468 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 TTC16Q8NEE8 873 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 ACAD9Q9H845 621 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 SLC8A2Q9UPR5 921 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 EZH2Q15910 746 aaKnown RBP10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 SLFN12LQ6IEE8 588 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 CEP112Q8N8E3 955 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 LINC00116Q8NCU8 138 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 PPP1R14CQ8TAE6 165 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 SRRTQ9BXP5 876 aaKnown RBP10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 USP42Q9H9J4 1324 aaKnown RBP10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 A0A1B0GVL5 298 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 PRPF3O43395 683 aaKnown RBP10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 SRGAP2BP0DMP2 458 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 SFNP31947 248 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 TMCO3Q6UWJ1 677 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 SRGAP1Q7Z6B7 1085 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 BBS5Q8N3I7 341 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 MARCH10Q8NA82 808 aaPredicted RBP10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 NSUN6Q8TEA1 469 aaKnown RBP10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 NLRP7Q8WX94 980 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 TBC1D22BQ9NU19 505 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 PANK4Q9NVE7 773 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 VPS54Q9P1Q0 977 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 CNOT7Q9UIV1 285 aaKnown RBP10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 PRR5LQ6MZQ0 368 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 KIAA1841Q6NSI8 718 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 STAG1Q8WVM7 1258 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 PPM1EQ8WY54 764 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 ADARB2Q9NS39 739 aaKnown RBP10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 MTRF1LQ9UGC7 380 aaKnown RBP10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 LCMT1Q9UIC8 334 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 TSKSQ9UJT2 592 aa10.76□□□□□ -0.69
TNFRSF9-204ENST00000615230 TBC1D8BQ0IIM8 1120 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 SNW1Q13573 536 aaKnown RBP10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 ZNF34Q8IZ26 560 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 AOPEPQ8N6M6 819 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 STK17AQ9UEE5 414 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 DBNLQ9UJU6 430 aaKnown RBP10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 PALD1Q9ULE6 856 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 ARHGAP23Q9P227 1491 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 KDM4FA0A1W2PPD8 638 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 MYO1EQ12965 1108 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 HLTFQ14527 1009 aaKnown RBP eCLIP10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 GPR161Q8N6U8 529 aaKnown RBP10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 RNF169Q8NCN4 708 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 HAUS1Q96CS2 278 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 FTOQ9C0B1 505 aaKnown RBP eCLIP10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 ZSWIM6Q9HCJ5 1215 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 SLC26A4O43511 780 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 MTX1Q13505 466 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 EP400NLQ6ZTU2 488 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 TAOK1Q7L7X3 1001 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 FAM178BQ8IXR5 827 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 C7orf31Q8N865 590 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 TRIM11Q96F44 468 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 NUB1Q9Y5A7 615 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 M0R2C6 588 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 CAMTA2O94983 1202 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 TUBBP07437 444 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 KRT9P35527 623 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 DAAM2Q86T65 1068 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 TSPYL1Q9H0U9 437 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 C2orf40Q9H1Z8 148 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 PAXBP1Q9Y5B6 917 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 E7EVH7 732 aa10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 TNPO2O14787 897 aaKnown RBP10.75□□□□□ -0.69
TNFRSF9-204ENST00000615230 LDHAP00338 332 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms