RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 DTHD1Q6ZMT9 781 aa21.64■■□□□ 1.05
MMP28-204ENST00000615136 NEK8Q86SG6 692 aa21.64■■□□□ 1.05
MMP28-204ENST00000615136 BLZF1Q9H2G9 400 aa21.64■■□□□ 1.05
MMP28-204ENST00000615136 COL2A1P02458 1487 aaPredicted RBP21.63■■□□□ 1.05
MMP28-204ENST00000615136 hCG_1984214I3L0E3 225 aa21.63■■□□□ 1.05
MMP28-204ENST00000615136 ZBTB5O15062 677 aa21.63■■□□□ 1.05
MMP28-204ENST00000615136 SLC1A4P43007 532 aa21.63■■□□□ 1.05
MMP28-204ENST00000615136 UBASH3AP57075 661 aa21.63■■□□□ 1.05
MMP28-204ENST00000615136 TRMT44Q8IYL2 757 aaKnown RBP21.63■■□□□ 1.05
MMP28-204ENST00000615136 ZNF713Q8N859 430 aaPredicted RBP21.63■■□□□ 1.05
MMP28-204ENST00000615136 MLKLQ8NB16 471 aa21.63■■□□□ 1.05
MMP28-204ENST00000615136 LRRC15Q8TF66 581 aa21.63■■□□□ 1.05
MMP28-204ENST00000615136 FANCLQ9NW38 375 aa21.63■■□□□ 1.05
MMP28-204ENST00000615136 ARFGEF1Q9Y6D6 1849 aa21.63■■□□□ 1.05
MMP28-204ENST00000615136 A0A1W2PRG0 241 aa21.63■■□□□ 1.05
MMP28-204ENST00000615136 PTPN14Q15678 1187 aa21.63■■□□□ 1.05
MMP28-204ENST00000615136 NIM1KQ8IY84 436 aa21.63■■□□□ 1.05
MMP28-204ENST00000615136 IQUBQ8NA54 791 aa21.63■■□□□ 1.05
MMP28-204ENST00000615136 DPF2Q92785 391 aa21.63■■□□□ 1.05
MMP28-204ENST00000615136 PPP1R1BQ9UD71 204 aaPredicted RBP21.63■■□□□ 1.05
MMP28-204ENST00000615136 DACH1Q9UI36 760 aa21.63■■□□□ 1.05
MMP28-204ENST00000615136 SCAF8Q9UPN6 1271 aaKnown RBP21.63■■□□□ 1.05
MMP28-204ENST00000615136 F5H6K3 240 aa21.62■■□□□ 1.05
MMP28-204ENST00000615136 CD44P16070 742 aaKnown RBP21.62■■□□□ 1.05
MMP28-204ENST00000615136 SNAP25P60880 206 aa21.62■■□□□ 1.05
MMP28-204ENST00000615136 KLRC3Q07444 240 aa21.62■■□□□ 1.05
MMP28-204ENST00000615136 SYCP1Q15431 976 aa21.62■■□□□ 1.05
MMP28-204ENST00000615136 SPDYE2Q495Y8 402 aa21.62■■□□□ 1.05
MMP28-204ENST00000615136 NAALADL2Q58DX5 795 aa21.62■■□□□ 1.05
MMP28-204ENST00000615136 HSP90AA4PQ58FG1 418 aa21.62■■□□□ 1.05
MMP28-204ENST00000615136 SMYD4Q8IYR2 804 aaPredicted RBP21.62■■□□□ 1.05
MMP28-204ENST00000615136 OGFOD1Q8N543 542 aa21.62■■□□□ 1.05
MMP28-204ENST00000615136 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.62■■□□□ 1.05
MMP28-204ENST00000615136 BRCA1P38398 1863 aaKnown RBP21.62■■□□□ 1.05
MMP28-204ENST00000615136 SERPINC1P01008 464 aa21.62■■□□□ 1.05
MMP28-204ENST00000615136 TGFB2P61812 414 aa21.62■■□□□ 1.05
MMP28-204ENST00000615136 CUL4BQ13620 913 aa21.62■■□□□ 1.05
MMP28-204ENST00000615136 QRICH1Q2TAL8 776 aa21.62■■□□□ 1.05
MMP28-204ENST00000615136 E4F1Q66K89 784 aaPredicted RBP21.62■■□□□ 1.05
MMP28-204ENST00000615136 POTEDQ86YR6 584 aa21.62■■□□□ 1.05
MMP28-204ENST00000615136 ANKRD7Q92527 254 aa21.62■■□□□ 1.05
MMP28-204ENST00000615136 PLIN2Q99541 437 aa21.62■■□□□ 1.05
MMP28-204ENST00000615136 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.62■■□□□ 1.05
MMP28-204ENST00000615136 VEZTQ9HBM0 779 aa21.62■■□□□ 1.05
MMP28-204ENST00000615136 TMOD2Q9NZR1 351 aa21.62■■□□□ 1.05
MMP28-204ENST00000615136 HDAC9Q9UKV0 1011 aa21.62■■□□□ 1.05
MMP28-204ENST00000615136 PSDA5PKW4 1024 aaPredicted RBP21.61■■□□□ 1.05
MMP28-204ENST00000615136 NRDCO43847 1150 aa21.61■■□□□ 1.05
MMP28-204ENST00000615136 NDUFB10O96000 172 aa21.61■■□□□ 1.05
MMP28-204ENST00000615136 RBM26Q5T8P6 1007 aaKnown RBP21.61■■□□□ 1.05
MMP28-204ENST00000615136 VSTM4Q8IW00 320 aa21.61■■□□□ 1.05
MMP28-204ENST00000615136 CCDC112Q8NEF3 446 aa21.61■■□□□ 1.05
MMP28-204ENST00000615136 DCAF4Q8WV16 495 aa21.61■■□□□ 1.05
MMP28-204ENST00000615136 FAM151AQ8WW52 585 aa21.61■■□□□ 1.05
MMP28-204ENST00000615136 TMEM39BQ9GZU3 492 aa21.61■■□□□ 1.05
MMP28-204ENST00000615136 RIC8AQ9NPQ8 531 aa21.61■■□□□ 1.05
MMP28-204ENST00000615136 FER1L6Q2WGJ9 1857 aa21.6■■□□□ 1.05
MMP28-204ENST00000615136 KIF2AO00139 706 aaPredicted RBP21.6■■□□□ 1.05
MMP28-204ENST00000615136 TDP2O95551 362 aa21.6■■□□□ 1.05
MMP28-204ENST00000615136 OR52Z1P0C646 297 aa21.6■■□□□ 1.05
MMP28-204ENST00000615136 PRPHP41219 470 aa21.6■■□□□ 1.05
MMP28-204ENST00000615136 ECE1P42892 770 aa21.6■■□□□ 1.05
MMP28-204ENST00000615136 CLK2P49760 499 aaKnown RBP21.6■■□□□ 1.05
MMP28-204ENST00000615136 DALRD3Q5D0E6 543 aaKnown RBP21.6■■□□□ 1.05
MMP28-204ENST00000615136 PPP4R3BQ5MIZ7 849 aa21.6■■□□□ 1.05
MMP28-204ENST00000615136 ENOX1Q8TC92 643 aaKnown RBP21.6■■□□□ 1.05
MMP28-204ENST00000615136 SLC37A4O43826 429 aa21.6■■□□□ 1.05
MMP28-204ENST00000615136 ZNF18P17022 549 aa21.6■■□□□ 1.05
MMP28-204ENST00000615136 TAL1P17542 331 aaPredicted RBP21.6■■□□□ 1.05
MMP28-204ENST00000615136 NBPF9Q3BBW0 867 aa21.6■■□□□ 1.05
MMP28-204ENST00000615136 CCDC34Q96HJ3 373 aa21.6■■□□□ 1.05
MMP28-204ENST00000615136 DISC1Q9NRI5 854 aa21.6■■□□□ 1.05
MMP28-204ENST00000615136 NFKBIEO00221 500 aa21.59■■□□□ 1.05
MMP28-204ENST00000615136 LAD1O00515 517 aa21.59■■□□□ 1.05
MMP28-204ENST00000615136 TNNI2P48788 182 aa21.59■■□□□ 1.05
MMP28-204ENST00000615136 CDC37Q16543 378 aaPredicted RBP21.59■■□□□ 1.05
MMP28-204ENST00000615136 PTPN21Q16825 1174 aa21.59■■□□□ 1.05
MMP28-204ENST00000615136 KIAA1755Q5JYT7 1200 aa21.59■■□□□ 1.05
MMP28-204ENST00000615136 TRMT1Q9NXH9 659 aaKnown RBP21.59■■□□□ 1.05
MMP28-204ENST00000615136 STAT6P42226 847 aa21.58■■□□□ 1.05
MMP28-204ENST00000615136 PPP1R18Q6NYC8 613 aa21.58■■□□□ 1.05
MMP28-204ENST00000615136 SPICE1Q8N0Z3 855 aa21.58■■□□□ 1.05
MMP28-204ENST00000615136 GMCL1P1Q8NEA9 526 aa21.58■■□□□ 1.05
MMP28-204ENST00000615136 AGBL3Q8NEM8 1001 aa21.58■■□□□ 1.05
MMP28-204ENST00000615136 VPS33BQ9H267 617 aa21.58■■□□□ 1.05
MMP28-204ENST00000615136 INTS13Q9NVM9 706 aa21.58■■□□□ 1.05
MMP28-204ENST00000615136 HERC5Q9UII4 1024 aaKnown RBP21.58■■□□□ 1.05
MMP28-204ENST00000615136 EGFRP00533 1210 aa21.58■■□□□ 1.04
MMP28-204ENST00000615136 TECP42680 631 aa21.58■■□□□ 1.04
MMP28-204ENST00000615136 CT47A1Q5JQC4 288 aaPredicted RBP21.58■■□□□ 1.04
MMP28-204ENST00000615136 MIGA2Q7L4E1 593 aa21.58■■□□□ 1.04
MMP28-204ENST00000615136 ACER1Q8TDN7 264 aa21.58■■□□□ 1.04
MMP28-204ENST00000615136 ZBED3Q96IU2 234 aaPredicted RBP21.58■■□□□ 1.04
MMP28-204ENST00000615136 GSDMAQ96QA5 445 aa21.58■■□□□ 1.04
MMP28-204ENST00000615136 MTFR1LQ9H019 292 aa21.58■■□□□ 1.04
MMP28-204ENST00000615136 TAOK3Q9H2K8 898 aa21.58■■□□□ 1.04
MMP28-204ENST00000615136 NFE2L3Q9Y4A8 694 aa21.58■■□□□ 1.04
MMP28-204ENST00000615136 MYH7BA7E2Y1 1941 aa21.57■■□□□ 1.04
MMP28-204ENST00000615136 USP17L15C9J2P7 530 aa21.57■■□□□ 1.04
MMP28-204ENST00000615136 USP17L13C9JLJ4 530 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms