RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 EXOSC10Q01780 885 aaKnown RBP19.49■□□□□ 0.71
CBWD3-211ENST00000615061 QRICH1Q2TAL8 776 aa19.49■□□□□ 0.71
CBWD3-211ENST00000615061 NFXL1Q6ZNB6 911 aa19.49■□□□□ 0.71
CBWD3-211ENST00000615061 CLEC4DQ8WXI8 215 aa19.49■□□□□ 0.71
CBWD3-211ENST00000615061 MTA3Q9BTC8 594 aa19.49■□□□□ 0.71
CBWD3-211ENST00000615061 DDX49Q9Y6V7 483 aaKnown RBP19.49■□□□□ 0.71
CBWD3-211ENST00000615061 LHX8Q68G74 356 aa19.49■□□□□ 0.71
CBWD3-211ENST00000615061 FAM133AQ8N9E0 248 aa19.49■□□□□ 0.71
CBWD3-211ENST00000615061 CYP39A1Q9NYL5 469 aa19.49■□□□□ 0.71
CBWD3-211ENST00000615061 ASTN1O14525 1302 aa19.49■□□□□ 0.71
CBWD3-211ENST00000615061 WDR19Q8NEZ3 1342 aa19.49■□□□□ 0.71
CBWD3-211ENST00000615061 POTEB2H3BUK9 544 aa19.48■□□□□ 0.71
CBWD3-211ENST00000615061 CYTH3O43739 400 aa19.48■□□□□ 0.71
CBWD3-211ENST00000615061 LIFRP42702 1097 aa19.48■□□□□ 0.71
CBWD3-211ENST00000615061 KRT32Q14532 448 aa19.48■□□□□ 0.71
CBWD3-211ENST00000615061 ANO1Q5XXA6 986 aa19.48■□□□□ 0.71
CBWD3-211ENST00000615061 DHX32Q7L7V1 743 aaKnown RBP19.48■□□□□ 0.71
CBWD3-211ENST00000615061 JAKMIP1Q96N16 626 aaKnown RBP19.48■□□□□ 0.71
CBWD3-211ENST00000615061 USP26Q9BXU7 913 aa19.48■□□□□ 0.71
CBWD3-211ENST00000615061 SOWAHBA6NEL2 793 aa19.47■□□□□ 0.71
CBWD3-211ENST00000615061 CCDC69A6NI79 296 aa19.47■□□□□ 0.71
CBWD3-211ENST00000615061 BAATQ14032 418 aaPredicted RBP19.47■□□□□ 0.71
CBWD3-211ENST00000615061 CCDC144CPQ8IYA2 1237 aa19.47■□□□□ 0.71
CBWD3-211ENST00000615061 PFASO15067 1338 aa19.47■□□□□ 0.71
CBWD3-211ENST00000615061 PPP1R11O60927 126 aaPredicted RBP19.47■□□□□ 0.71
CBWD3-211ENST00000615061 DDAH1O94760 285 aa19.47■□□□□ 0.71
CBWD3-211ENST00000615061 SNAI1O95863 264 aaPredicted RBP19.47■□□□□ 0.71
CBWD3-211ENST00000615061 SLC30A10Q6XR72 485 aa19.47■□□□□ 0.71
CBWD3-211ENST00000615061 UBE2Q1Q7Z7E8 422 aa19.47■□□□□ 0.71
CBWD3-211ENST00000615061 HOMER1Q86YM7 354 aa19.47■□□□□ 0.71
CBWD3-211ENST00000615061 DIS3LQ8TF46 1054 aaKnown RBP19.47■□□□□ 0.71
CBWD3-211ENST00000615061 DDX20Q9UHI6 824 aaKnown RBP19.47■□□□□ 0.71
CBWD3-211ENST00000615061 PTPDC1A2A3K4 754 aa19.46■□□□□ 0.71
CBWD3-211ENST00000615061 FARP2O94887 1054 aaPredicted RBP19.46■□□□□ 0.71
CBWD3-211ENST00000615061 MNX1P50219 401 aaPredicted RBP19.46■□□□□ 0.71
CBWD3-211ENST00000615061 MAMDC4Q6UXC1 1216 aa19.46■□□□□ 0.71
CBWD3-211ENST00000615061 SGMS1Q86VZ5 419 aa19.46■□□□□ 0.71
CBWD3-211ENST00000615061 TMTC2Q8N394 836 aa19.46■□□□□ 0.71
CBWD3-211ENST00000615061 TBC1D5Q92609 795 aa19.46■□□□□ 0.71
CBWD3-211ENST00000615061 MTMR8Q96EF0 704 aa19.46■□□□□ 0.71
CBWD3-211ENST00000615061 PIGSQ96S52 555 aa19.46■□□□□ 0.71
CBWD3-211ENST00000615061 RIOX1Q9H6W3 641 aa19.46■□□□□ 0.71
CBWD3-211ENST00000615061 OGDHLQ9ULD0 1010 aa19.46■□□□□ 0.71
CBWD3-211ENST00000615061 SLC12A7Q9Y666 1083 aa19.46■□□□□ 0.71
CBWD3-211ENST00000615061 ZNF467Q7Z7K2 595 aaPredicted RBP19.45■□□□□ 0.7
CBWD3-211ENST00000615061 FBXO11Q86XK2 927 aa19.45■□□□□ 0.7
CBWD3-211ENST00000615061 CMTR1Q8N1G2 835 aaKnown RBP19.45■□□□□ 0.7
CBWD3-211ENST00000615061 PIBF1Q8WXW3 757 aa19.45■□□□□ 0.7
CBWD3-211ENST00000615061 BRPF3Q9ULD4 1205 aa19.45■□□□□ 0.7
CBWD3-211ENST00000615061 ZBTB5O15062 677 aa19.44■□□□□ 0.7
CBWD3-211ENST00000615061 PLEKHA8P1O95397 391 aa19.44■□□□□ 0.7
CBWD3-211ENST00000615061 ZNF865P0CJ78 1059 aaPredicted RBP19.44■□□□□ 0.7
CBWD3-211ENST00000615061 CALML3P27482 149 aa19.44■□□□□ 0.7
CBWD3-211ENST00000615061 ARMCX2Q7L311 632 aa19.44■□□□□ 0.7
CBWD3-211ENST00000615061 MICU3Q86XE3 530 aa19.44■□□□□ 0.7
CBWD3-211ENST00000615061 CTCFLQ8NI51 663 aaPredicted RBP19.44■□□□□ 0.7
CBWD3-211ENST00000615061 PAWRQ96IZ0 340 aaKnown RBP19.44■□□□□ 0.7
CBWD3-211ENST00000615061 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.44■□□□□ 0.7
CBWD3-211ENST00000615061 SYNGAP1Q96PV0 1343 aa19.44■□□□□ 0.7
CBWD3-211ENST00000615061 SEPT4O43236 478 aa19.44■□□□□ 0.7
CBWD3-211ENST00000615061 RPS6P62753 249 aaKnown RBP19.44■□□□□ 0.7
CBWD3-211ENST00000615061 RNF207Q6ZRF8 634 aa19.44■□□□□ 0.7
CBWD3-211ENST00000615061 MSL3Q8N5Y2 521 aaKnown RBP19.44■□□□□ 0.7
CBWD3-211ENST00000615061 LENG1Q96BZ8 264 aaPredicted RBP19.44■□□□□ 0.7
CBWD3-211ENST00000615061 MAP3K14Q99558 947 aa19.44■□□□□ 0.7
CBWD3-211ENST00000615061 PNMA2Q9UL42 364 aa19.44■□□□□ 0.7
CBWD3-211ENST00000615061 CNPY2Q9Y2B0 182 aa19.44■□□□□ 0.7
CBWD3-211ENST00000615061 EPB41L2O43491 1005 aaKnown RBP19.43■□□□□ 0.7
CBWD3-211ENST00000615061 HMGB1P09429 215 aaKnown RBP19.43■□□□□ 0.7
CBWD3-211ENST00000615061 APOA5Q6Q788 366 aa19.43■□□□□ 0.7
CBWD3-211ENST00000615061 BLOC1S2Q6QNY1 142 aa19.43■□□□□ 0.7
CBWD3-211ENST00000615061 ZHX1Q9UKY1 873 aaPredicted RBP19.43■□□□□ 0.7
CBWD3-211ENST00000615061 ABCB11O95342 1321 aa19.43■□□□□ 0.7
CBWD3-211ENST00000615061 RANBP2P49792 3224 aaKnown RBP19.43■□□□□ 0.7
CBWD3-211ENST00000615061 CASTP20810 708 aaKnown RBP19.42■□□□□ 0.7
CBWD3-211ENST00000615061 KIF5BP33176 963 aa19.42■□□□□ 0.7
CBWD3-211ENST00000615061 Q6ZUG5 572 aa19.42■□□□□ 0.7
CBWD3-211ENST00000615061 SRBD1Q8N5C6 995 aaKnown RBP19.42■□□□□ 0.7
CBWD3-211ENST00000615061 AMNQ9BXJ7 453 aa19.42■□□□□ 0.7
CBWD3-211ENST00000615061 ALPK3Q96L96 1907 aa19.42■□□□□ 0.7
CBWD3-211ENST00000615061 LRRC37A2A6NM11 1700 aa19.42■□□□□ 0.7
CBWD3-211ENST00000615061 OPLAHO14841 1288 aa19.42■□□□□ 0.7
CBWD3-211ENST00000615061 CCDC82Q8N4S0 544 aa19.42■□□□□ 0.7
CBWD3-211ENST00000615061 FANCBQ8NB91 859 aa19.42■□□□□ 0.7
CBWD3-211ENST00000615061 KATNBL1Q9H079 304 aa19.42■□□□□ 0.7
CBWD3-211ENST00000615061 NRBP1Q9UHY1 535 aa19.42■□□□□ 0.7
CBWD3-211ENST00000615061 MSCO60682 206 aa19.41■□□□□ 0.7
CBWD3-211ENST00000615061 SEC24BO95487 1268 aa19.41■□□□□ 0.7
CBWD3-211ENST00000615061 CALM1P0DP23 149 aa19.41■□□□□ 0.7
CBWD3-211ENST00000615061 CALM2P0DP24 149 aa19.41■□□□□ 0.7
CBWD3-211ENST00000615061 CALM3P0DP25 149 aa19.41■□□□□ 0.7
CBWD3-211ENST00000615061 RPS6KB1P23443 525 aa19.41■□□□□ 0.7
CBWD3-211ENST00000615061 ACVR2BQ13705 512 aa19.41■□□□□ 0.7
CBWD3-211ENST00000615061 EEPD1Q7L9B9 569 aa19.41■□□□□ 0.7
CBWD3-211ENST00000615061 SPZ1Q9BXG8 430 aa19.41■□□□□ 0.7
CBWD3-211ENST00000615061 COL20A1Q9P218 1284 aa19.41■□□□□ 0.7
CBWD3-211ENST00000615061 PCDHA1Q9Y5I3 950 aa19.41■□□□□ 0.7
CBWD3-211ENST00000615061 KLF18A0A0U1RQI7 1052 aa19.4■□□□□ 0.7
CBWD3-211ENST00000615061 hCG_1642624A0A1W2PR95 340 aa19.4■□□□□ 0.7
CBWD3-211ENST00000615061 ADCY6O43306 1168 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms