RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 CFBP00751 764 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 SERPINC1P01008 464 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 CDK11BP21127 795 aaKnown RBP3.89□□□□□ -1.79
LIG4-205ENST00000614526 INPP5BP32019 993 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 PTGER2P43116 358 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 NOVP48745 357 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 DNTTIP2Q5QJE6 756 aaKnown RBP3.89□□□□□ -1.79
LIG4-205ENST00000614526 NBPF12Q5TAG4 269 aaPredicted RBP3.89□□□□□ -1.79
LIG4-205ENST00000614526 KRT25Q7Z3Z0 450 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 LRRC15Q8TF66 581 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 DPF2Q92785 391 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 HPS3Q969F9 1004 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 TIGD1Q96MW7 591 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 MTRQ99707 1265 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 XPO4Q9C0E2 1151 aaKnown RBP3.89□□□□□ -1.79
LIG4-205ENST00000614526 POLD4Q9HCU8 107 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 HOMER2Q9NSB8 354 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 SAMSN1Q9NSI8 373 aaKnown RBP3.89□□□□□ -1.79
LIG4-205ENST00000614526 NYAP2Q9P242 653 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 HACL1Q9UJ83 578 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 ZBTB21Q9ULJ3 1066 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 PYCARDQ9ULZ3 195 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 ZKSCAN5Q9Y2L8 839 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 ECM29Q5VYK3 1845 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 MYO3BQ8WXR4 1341 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 ZNF541Q9H0D2 1346 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 CDK5RAP2Q96SN8 1893 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 LAMB1P07942 1786 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 EDIL3O43854 480 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 SSBP05455 408 aaKnown RBP eCLIP3.89□□□□□ -1.79
LIG4-205ENST00000614526 SLFN14P0C7P3 912 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 CD44P16070 742 aaKnown RBP3.89□□□□□ -1.79
LIG4-205ENST00000614526 ERCC3P19447 782 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 EPS15P42566 896 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 RAD51AP2Q09MP3 1159 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 TNIP1Q15025 636 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 SYDE2Q5VT97 1194 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 RRAGBQ5VZM2 374 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 IQUBQ8NA54 791 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 ZNF579Q8NAF0 562 aaKnown RBP3.89□□□□□ -1.79
LIG4-205ENST00000614526 AGBL3Q8NEM8 1001 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 CYP2W1Q8TAV3 490 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 CUL5Q93034 780 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 ZKSCAN4Q969J2 545 aaPredicted RBP3.89□□□□□ -1.79
LIG4-205ENST00000614526 P2RX7Q99572 595 aaKnown RBP3.89□□□□□ -1.79
LIG4-205ENST00000614526 NUDT12Q9BQG2 462 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 ZNF341Q9BYN7 854 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 DEFB129Q9H1M3 183 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 KCNF1Q9H3M0 494 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 HOOK1Q9UJC3 728 aaKnown RBP3.89□□□□□ -1.79
LIG4-205ENST00000614526 TUBE1Q9UJT0 475 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 PRR12Q9ULL5 1215 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 GDAQ9Y2T3 454 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 OR52Z1P0C646 297 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 TXLNAP40222 546 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 STAT3P40763 770 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 TRAPPC10P48553 1259 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 MRPL12P52815 198 aaKnown RBP3.89□□□□□ -1.79
LIG4-205ENST00000614526 NCAPHQ15003 741 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 CALCRLQ16602 461 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 ANGEL2Q5VTE6 544 aaKnown RBP3.89□□□□□ -1.79
LIG4-205ENST00000614526 DYMQ7RTS9 669 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 TMC6Q7Z403 805 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 CABP7Q86V35 215 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 FBXO11Q86XK2 927 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 FHDC1Q9C0D6 1143 aaPredicted RBP3.89□□□□□ -1.79
LIG4-205ENST00000614526 ARHGEF10LQ9HCE6 1279 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 PKD2L1Q9P0L9 805 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 NFE2L3Q9Y4A8 694 aa3.89□□□□□ -1.79
LIG4-205ENST00000614526 FAM237AA0A1B0GTK4 181 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 DDNO94850 711 aaPredicted RBP3.88□□□□□ -1.79
LIG4-205ENST00000614526 BMP15O95972 392 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 PLCG1P19174 1290 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 CAP2P40123 477 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 FANCCQ00597 558 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 CACNB1Q02641 598 aaPredicted RBP3.88□□□□□ -1.79
LIG4-205ENST00000614526 KIF4BQ2VIQ3 1234 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 PRR16Q569H4 304 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 PLA2G4DQ86XP0 818 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 CCDC125Q86Z20 511 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 TRPM4Q8TD43 1214 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 CACTINQ8WUQ7 758 aaKnown RBP3.88□□□□□ -1.79
LIG4-205ENST00000614526 MKL1Q969V6 931 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 NAP1L5Q96NT1 182 aaPredicted RBP3.88□□□□□ -1.79
LIG4-205ENST00000614526 MED15Q96RN5 788 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 SGIP1Q9BQI5 828 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 RIC8AQ9NPQ8 531 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 LRWD1Q9UFC0 647 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 HERC5Q9UII4 1024 aaKnown RBP3.88□□□□□ -1.79
LIG4-205ENST00000614526 MYH15Q9Y2K3 1946 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 PLIN4Q96Q06 1357 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 PES1O00541 588 aaKnown RBP3.88□□□□□ -1.79
LIG4-205ENST00000614526 ZNF76P36508 570 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 STAT2P52630 851 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 UBASH3AP57075 661 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 MYL5Q02045 173 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 DPYDQ12882 1025 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 E2F4Q16254 413 aa3.88□□□□□ -1.79
LIG4-205ENST00000614526 TPD52L1Q16890 204 aaPredicted RBP3.88□□□□□ -1.79
LIG4-205ENST00000614526 NAALADL2Q58DX5 795 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms