RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 PRR29P0C7W0 189 aa12.09□□□□□ -0.47
FAM3A-221ENST00000612856 RNF187Q5TA31 235 aaPredicted RBP12.09□□□□□ -0.47
FAM3A-221ENST00000612856 ARMC9Q7Z3E5 817 aa12.09□□□□□ -0.47
FAM3A-221ENST00000612856 CAGE1Q8TC20 777 aa12.09□□□□□ -0.47
FAM3A-221ENST00000612856 GOLGA1Q92805 767 aa12.09□□□□□ -0.47
FAM3A-221ENST00000612856 MPHOSPH6Q99547 160 aaKnown RBP12.09□□□□□ -0.47
FAM3A-221ENST00000612856 EIF3CQ99613 913 aaKnown RBP12.09□□□□□ -0.47
FAM3A-221ENST00000612856 SENP2Q9HC62 589 aa12.09□□□□□ -0.47
FAM3A-221ENST00000612856 DACH1Q9UI36 760 aa12.09□□□□□ -0.47
FAM3A-221ENST00000612856 FMNL1O95466 1100 aaPredicted RBP12.08□□□□□ -0.48
FAM3A-221ENST00000612856 SCG2P13521 617 aa12.08□□□□□ -0.48
FAM3A-221ENST00000612856 NLGN2Q8NFZ4 835 aa12.08□□□□□ -0.48
FAM3A-221ENST00000612856 CDC42EP5Q6NZY7 148 aa12.08□□□□□ -0.48
FAM3A-221ENST00000612856 PLA2G4DQ86XP0 818 aa12.08□□□□□ -0.48
FAM3A-221ENST00000612856 CEP57Q86XR8 500 aa12.08□□□□□ -0.48
FAM3A-221ENST00000612856 HOOK2Q96ED9 719 aa12.08□□□□□ -0.48
FAM3A-221ENST00000612856 TMEM47Q9BQJ4 181 aa12.08□□□□□ -0.48
FAM3A-221ENST00000612856 DESI2Q9BSY9 194 aa12.08□□□□□ -0.48
FAM3A-221ENST00000612856 AS3MTQ9HBK9 375 aa12.08□□□□□ -0.48
FAM3A-221ENST00000612856 LMO7Q8WWI1 1683 aa12.08□□□□□ -0.48
FAM3A-221ENST00000612856 C2orf69Q8N8R5 385 aa12.08□□□□□ -0.48
FAM3A-221ENST00000612856 NSUN7Q8NE18 718 aaKnown RBP12.08□□□□□ -0.48
FAM3A-221ENST00000612856 RUFY1Q96T51 708 aa12.08□□□□□ -0.48
FAM3A-221ENST00000612856 CRACR2AQ9BSW2 395 aa12.08□□□□□ -0.48
FAM3A-221ENST00000612856 PARD6BQ9BYG5 372 aa12.08□□□□□ -0.48
FAM3A-221ENST00000612856 TRPM3Q9HCF6 1732 aaPredicted RBP12.07□□□□□ -0.48
FAM3A-221ENST00000612856 MEIS1O00470 390 aa12.07□□□□□ -0.48
FAM3A-221ENST00000612856 GAS7O60861 476 aa12.07□□□□□ -0.48
FAM3A-221ENST00000612856 IREB2P48200 963 aaKnown RBP12.07□□□□□ -0.48
FAM3A-221ENST00000612856 CDR1P51861 262 aa12.07□□□□□ -0.48
FAM3A-221ENST00000612856 AMPD3Q01432 767 aa12.07□□□□□ -0.48
FAM3A-221ENST00000612856 KCTD2Q14681 263 aa12.07□□□□□ -0.48
FAM3A-221ENST00000612856 GRIK5Q16478 980 aa12.07□□□□□ -0.48
FAM3A-221ENST00000612856 CALCRLQ16602 461 aa12.07□□□□□ -0.48
FAM3A-221ENST00000612856 HERC4Q5GLZ8 1057 aaPredicted RBP12.07□□□□□ -0.48
FAM3A-221ENST00000612856 STAG2Q8N3U4 1231 aa12.07□□□□□ -0.48
FAM3A-221ENST00000612856 MROH7-TTC4A0A0A0MT08 1334 aa12.07□□□□□ -0.48
FAM3A-221ENST00000612856 SDK1Q7Z5N4 2213 aa12.07□□□□□ -0.48
FAM3A-221ENST00000612856 F5H6K3 240 aa12.07□□□□□ -0.48
FAM3A-221ENST00000612856 CTAGE5O15320 804 aa12.07□□□□□ -0.48
FAM3A-221ENST00000612856 MARK3P27448 753 aa12.07□□□□□ -0.48
FAM3A-221ENST00000612856 HUNKP57058 714 aa12.07□□□□□ -0.48
FAM3A-221ENST00000612856 KLRC3Q07444 240 aa12.07□□□□□ -0.48
FAM3A-221ENST00000612856 LONRF2Q1L5Z9 754 aa12.07□□□□□ -0.48
FAM3A-221ENST00000612856 DCAF17Q5H9S7 520 aaPredicted RBP12.07□□□□□ -0.48
FAM3A-221ENST00000612856 TICAM2Q86XR7 235 aa12.07□□□□□ -0.48
FAM3A-221ENST00000612856 TRMT44Q8IYL2 757 aaKnown RBP12.07□□□□□ -0.48
FAM3A-221ENST00000612856 TSG101Q99816 390 aa12.07□□□□□ -0.48
FAM3A-221ENST00000612856 NCAPGQ9BPX3 1015 aa12.07□□□□□ -0.48
FAM3A-221ENST00000612856 KDM3BQ7LBC6 1761 aa12.07□□□□□ -0.48
FAM3A-221ENST00000612856 USP17L10C9JJH3 530 aa12.07□□□□□ -0.48
FAM3A-221ENST00000612856 EPB41L2O43491 1005 aaKnown RBP12.07□□□□□ -0.48
FAM3A-221ENST00000612856 CAVIN2O95810 425 aa12.07□□□□□ -0.48
FAM3A-221ENST00000612856 ASNSP08243 561 aa12.07□□□□□ -0.48
FAM3A-221ENST00000612856 NLRX1Q86UT6 975 aa12.07□□□□□ -0.48
FAM3A-221ENST00000612856 BLIDQ8IZY5 108 aa12.07□□□□□ -0.48
FAM3A-221ENST00000612856 TULP2O00295 520 aa12.06□□□□□ -0.48
FAM3A-221ENST00000612856 NBPF11Q86T75 865 aa12.06□□□□□ -0.48
FAM3A-221ENST00000612856 SLC16A10Q8TF71 515 aa12.06□□□□□ -0.48
FAM3A-221ENST00000612856 FBXO28Q9NVF7 368 aa12.06□□□□□ -0.48
FAM3A-221ENST00000612856 ATP2C2O75185 946 aa12.06□□□□□ -0.48
FAM3A-221ENST00000612856 STAT2P52630 851 aa12.06□□□□□ -0.48
FAM3A-221ENST00000612856 ENAHQ8N8S7 591 aaPredicted RBP12.06□□□□□ -0.48
FAM3A-221ENST00000612856 MRFAP1L1Q96HT8 127 aa12.06□□□□□ -0.48
FAM3A-221ENST00000612856 CCDC17Q96LX7 622 aa12.06□□□□□ -0.48
FAM3A-221ENST00000612856 FUCA2Q9BTY2 467 aa12.06□□□□□ -0.48
FAM3A-221ENST00000612856 TRAF1Q13077 416 aa12.06□□□□□ -0.48
FAM3A-221ENST00000612856 PTGDRQ13258 359 aa12.06□□□□□ -0.48
FAM3A-221ENST00000612856 RILPL1Q5EBL4 403 aa12.06□□□□□ -0.48
FAM3A-221ENST00000612856 CCDC181Q5TID7 509 aa12.06□□□□□ -0.48
FAM3A-221ENST00000612856 MYSM1Q5VVJ2 828 aa12.06□□□□□ -0.48
FAM3A-221ENST00000612856 TTC19Q6DKK2 380 aaPredicted RBP12.06□□□□□ -0.48
FAM3A-221ENST00000612856 DLK2Q6UY11 383 aa12.06□□□□□ -0.48
FAM3A-221ENST00000612856 GBP6Q6ZN66 633 aa12.06□□□□□ -0.48
FAM3A-221ENST00000612856 KCNH3Q9ULD8 1083 aa12.06□□□□□ -0.48
FAM3A-221ENST00000612856 TRPC6Q9Y210 931 aa12.06□□□□□ -0.48
FAM3A-221ENST00000612856 FRMD3A2A2Y4 597 aa12.05□□□□□ -0.48
FAM3A-221ENST00000612856 PLSCR1O15162 318 aa12.05□□□□□ -0.48
FAM3A-221ENST00000612856 ERLIN2O94905 339 aa12.05□□□□□ -0.48
FAM3A-221ENST00000612856 TAL1P17542 331 aaPredicted RBP12.05□□□□□ -0.48
FAM3A-221ENST00000612856 MTMR2Q13614 643 aa12.05□□□□□ -0.48
FAM3A-221ENST00000612856 PPP2R5AQ15172 486 aa12.05□□□□□ -0.48
FAM3A-221ENST00000612856 AMNQ9BXJ7 453 aa12.05□□□□□ -0.48
FAM3A-221ENST00000612856 KIF5CO60282 957 aa12.05□□□□□ -0.48
FAM3A-221ENST00000612856 PFKFB2O60825 505 aa12.05□□□□□ -0.48
FAM3A-221ENST00000612856 SLC20A2Q08357 652 aa12.05□□□□□ -0.48
FAM3A-221ENST00000612856 FOXR1Q6PIV2 292 aa12.05□□□□□ -0.48
FAM3A-221ENST00000612856 CNPY4Q8N129 248 aa12.05□□□□□ -0.48
FAM3A-221ENST00000612856 DHX36Q9H2U1 1008 aaKnown RBP12.05□□□□□ -0.48
FAM3A-221ENST00000612856 PCDHA12Q9UN75 941 aa12.05□□□□□ -0.48
FAM3A-221ENST00000612856 CLIC4Q9Y696 253 aa12.05□□□□□ -0.48
FAM3A-221ENST00000612856 ARHGEF35A5YM69 484 aa12.05□□□□□ -0.48
FAM3A-221ENST00000612856 GCOM1H8Y6P7 765 aaPredicted RBP12.05□□□□□ -0.48
FAM3A-221ENST00000612856 EBAG9O00559 213 aa12.05□□□□□ -0.48
FAM3A-221ENST00000612856 CELF2O95319 508 aaKnown RBP12.05□□□□□ -0.48
FAM3A-221ENST00000612856 POLR2MP0CAP2 368 aa12.05□□□□□ -0.48
FAM3A-221ENST00000612856 STRIP1Q5VSL9 837 aa12.05□□□□□ -0.48
FAM3A-221ENST00000612856 CC2D1AQ6P1N0 951 aaPredicted RBP12.05□□□□□ -0.48
FAM3A-221ENST00000612856 RSBN1LQ6PCB5 846 aaPredicted RBP12.05□□□□□ -0.48
FAM3A-221ENST00000612856 HDXQ7Z353 690 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms