RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 FAM43AQ8N2R8 423 aa18.38■□□□□ 0.53
CLTCL1-207ENST00000611723 ZDHHC9Q9Y397 364 aa18.38■□□□□ 0.53
CLTCL1-207ENST00000611723 CTDP1Q9Y5B0 961 aaPredicted RBP18.38■□□□□ 0.53
CLTCL1-207ENST00000611723 MMP1P03956 469 aa18.37■□□□□ 0.53
CLTCL1-207ENST00000611723 CALML3P27482 149 aa18.37■□□□□ 0.53
CLTCL1-207ENST00000611723 NAPAP54920 295 aa18.37■□□□□ 0.53
CLTCL1-207ENST00000611723 NLRP5P59047 1200 aa18.37■□□□□ 0.53
CLTCL1-207ENST00000611723 KIF23Q02241 960 aaPredicted RBP18.37■□□□□ 0.53
CLTCL1-207ENST00000611723 SREBF2Q12772 1141 aa18.37■□□□□ 0.53
CLTCL1-207ENST00000611723 PKP1Q13835 747 aa18.37■□□□□ 0.53
CLTCL1-207ENST00000611723 TMEM132BQ14DG7 1078 aa18.37■□□□□ 0.53
CLTCL1-207ENST00000611723 NPY5RQ15761 445 aa18.37■□□□□ 0.53
CLTCL1-207ENST00000611723 CCDC174Q6PII3 467 aa18.37■□□□□ 0.53
CLTCL1-207ENST00000611723 SAMD1Q6SPF0 538 aaPredicted RBP18.37■□□□□ 0.53
CLTCL1-207ENST00000611723 DAGLBQ8NCG7 672 aa18.37■□□□□ 0.53
CLTCL1-207ENST00000611723 ZNF214Q9UL59 606 aaPredicted RBP18.37■□□□□ 0.53
CLTCL1-207ENST00000611723 KCNJ14Q9UNX9 436 aa18.37■□□□□ 0.53
CLTCL1-207ENST00000611723 SMCO2A6NFE2 343 aa18.36■□□□□ 0.53
CLTCL1-207ENST00000611723 TNRC18O15417 2968 aaPredicted RBP18.36■□□□□ 0.53
CLTCL1-207ENST00000611723 ABCB11O95342 1321 aa18.36■□□□□ 0.53
CLTCL1-207ENST00000611723 ZSCAN22P10073 491 aaPredicted RBP18.36■□□□□ 0.53
CLTCL1-207ENST00000611723 GNA11P29992 359 aa18.36■□□□□ 0.53
CLTCL1-207ENST00000611723 GUCY1B3Q02153 619 aa18.36■□□□□ 0.53
CLTCL1-207ENST00000611723 TKFCQ3LXA3 575 aa18.36■□□□□ 0.53
CLTCL1-207ENST00000611723 IFNL1Q8IU54 200 aa18.36■□□□□ 0.53
CLTCL1-207ENST00000611723 AGBL1Q96MI9 1066 aa18.36■□□□□ 0.53
CLTCL1-207ENST00000611723 MAF1Q9H063 256 aa18.36■□□□□ 0.53
CLTCL1-207ENST00000611723 GLT8D2Q9H1C3 349 aa18.36■□□□□ 0.53
CLTCL1-207ENST00000611723 RAVER2Q9HCJ3 691 aaKnown RBP18.36■□□□□ 0.53
CLTCL1-207ENST00000611723 RBPJLQ9UBG7 517 aa18.36■□□□□ 0.53
CLTCL1-207ENST00000611723 MRPL11Q9Y3B7 192 aaKnown RBP18.36■□□□□ 0.53
CLTCL1-207ENST00000611723 RABGAP1Q9Y3P9 1069 aa18.36■□□□□ 0.53
CLTCL1-207ENST00000611723 SMCHD1A6NHR9 2005 aa18.35■□□□□ 0.53
CLTCL1-207ENST00000611723 VPS37CA5D8V6 355 aaPredicted RBP18.35■□□□□ 0.53
CLTCL1-207ENST00000611723 IGF2BP3O00425 579 aaKnown RBP eCLIP18.35■□□□□ 0.53
CLTCL1-207ENST00000611723 TRPA1O75762 1119 aa18.35■□□□□ 0.53
CLTCL1-207ENST00000611723 CNMDO75829 334 aa18.35■□□□□ 0.53
CLTCL1-207ENST00000611723 U2AF2P26368 475 aaKnown RBP eCLIP18.35■□□□□ 0.53
CLTCL1-207ENST00000611723 GCLCP48506 637 aaPredicted RBP18.35■□□□□ 0.53
CLTCL1-207ENST00000611723 FOSBP53539 338 aa18.35■□□□□ 0.53
CLTCL1-207ENST00000611723 SAFBQ15424 915 aaKnown RBP eCLIP18.35■□□□□ 0.53
CLTCL1-207ENST00000611723 CPXCR1Q8N123 301 aa18.35■□□□□ 0.53
CLTCL1-207ENST00000611723 PARK7Q99497 189 aaKnown RBP18.35■□□□□ 0.53
CLTCL1-207ENST00000611723 TEX13BQ9BXU2 312 aa18.35■□□□□ 0.53
CLTCL1-207ENST00000611723 FOXP1Q9H334 677 aaPredicted RBP18.35■□□□□ 0.53
CLTCL1-207ENST00000611723 C6orf50Q9HD87 102 aa18.35■□□□□ 0.53
CLTCL1-207ENST00000611723 RIC8AQ9NPQ8 531 aa18.35■□□□□ 0.53
CLTCL1-207ENST00000611723 RNF186Q9NXI6 227 aa18.35■□□□□ 0.53
CLTCL1-207ENST00000611723 BTBD7Q9P203 1132 aa18.35■□□□□ 0.53
CLTCL1-207ENST00000611723 CCPG1Q9ULG6 757 aa18.35■□□□□ 0.53
CLTCL1-207ENST00000611723 PCDHA4Q9UN74 947 aa18.35■□□□□ 0.53
CLTCL1-207ENST00000611723 M0R2N6 131 aa18.34■□□□□ 0.53
CLTCL1-207ENST00000611723 CYP2C8P10632 490 aa18.34■□□□□ 0.53
CLTCL1-207ENST00000611723 STAT3P40763 770 aa18.34■□□□□ 0.53
CLTCL1-207ENST00000611723 MRPL12P52815 198 aaKnown RBP18.34■□□□□ 0.53
CLTCL1-207ENST00000611723 BLIDQ8IZY5 108 aa18.34■□□□□ 0.53
CLTCL1-207ENST00000611723 SAMD3Q8N6K7 520 aa18.34■□□□□ 0.53
CLTCL1-207ENST00000611723 BICD2Q8TD16 824 aa18.34■□□□□ 0.53
CLTCL1-207ENST00000611723 ZSCAN16Q9H4T2 348 aaPredicted RBP18.34■□□□□ 0.53
CLTCL1-207ENST00000611723 F13A1P00488 732 aa18.33■□□□□ 0.52
CLTCL1-207ENST00000611723 KRT2P35908 639 aa18.33■□□□□ 0.52
CLTCL1-207ENST00000611723 GHRHRQ02643 423 aa18.33■□□□□ 0.52
CLTCL1-207ENST00000611723 USH1GQ495M9 461 aa18.33■□□□□ 0.52
CLTCL1-207ENST00000611723 RIOX2Q8IUF8 465 aa18.33■□□□□ 0.52
CLTCL1-207ENST00000611723 DIS3L2Q8IYB7 885 aaKnown RBP18.33■□□□□ 0.52
CLTCL1-207ENST00000611723 CLEC4DQ8WXI8 215 aa18.33■□□□□ 0.52
CLTCL1-207ENST00000611723 SPATC1LQ9H0A9 340 aa18.33■□□□□ 0.52
CLTCL1-207ENST00000611723 PSTPIP2Q9H939 334 aa18.33■□□□□ 0.52
CLTCL1-207ENST00000611723 BRMS1Q9HCU9 246 aa18.33■□□□□ 0.52
CLTCL1-207ENST00000611723 A0A0G2JMZ2 1700 aa18.32■□□□□ 0.52
CLTCL1-207ENST00000611723 BTBD18B2RXH4 712 aa18.32■□□□□ 0.52
CLTCL1-207ENST00000611723 PIK3CDO00329 1044 aa18.32■□□□□ 0.52
CLTCL1-207ENST00000611723 OPLAHO14841 1288 aa18.32■□□□□ 0.52
CLTCL1-207ENST00000611723 COPB2P35606 906 aa18.32■□□□□ 0.52
CLTCL1-207ENST00000611723 CLK2P49760 499 aaKnown RBP18.32■□□□□ 0.52
CLTCL1-207ENST00000611723 ADCY7P51828 1080 aa18.32■□□□□ 0.52
CLTCL1-207ENST00000611723 RESTQ13127 1097 aa18.32■□□□□ 0.52
CLTCL1-207ENST00000611723 SNRNP48Q6IEG0 339 aaKnown RBP18.32■□□□□ 0.52
CLTCL1-207ENST00000611723 CUL5Q93034 780 aa18.32■□□□□ 0.52
CLTCL1-207ENST00000611723 TNFRSF25Q93038 417 aa18.32■□□□□ 0.52
CLTCL1-207ENST00000611723 TRERF1Q96PN7 1200 aa18.32■□□□□ 0.52
CLTCL1-207ENST00000611723 TXNRD2Q9NNW7 524 aa18.32■□□□□ 0.52
CLTCL1-207ENST00000611723 MAP3K20Q9NYL2 800 aaKnown RBP18.32■□□□□ 0.52
CLTCL1-207ENST00000611723 MORF4L1Q9UBU8 362 aa18.32■□□□□ 0.52
CLTCL1-207ENST00000611723 RIPK3Q9Y572 518 aa18.32■□□□□ 0.52
CLTCL1-207ENST00000611723 COL11A1P12107 1806 aaPredicted RBP18.32■□□□□ 0.52
CLTCL1-207ENST00000611723 ADGRA2Q96PE1 1338 aa18.31■□□□□ 0.52
CLTCL1-207ENST00000611723 SLC25A27O95847 323 aa18.31■□□□□ 0.52
CLTCL1-207ENST00000611723 ALDH1A1P00352 501 aa18.31■□□□□ 0.52
CLTCL1-207ENST00000611723 ALAS1P13196 640 aa18.31■□□□□ 0.52
CLTCL1-207ENST00000611723 TAL1P17542 331 aaPredicted RBP18.31■□□□□ 0.52
CLTCL1-207ENST00000611723 Q3C1V9 767 aa18.31■□□□□ 0.52
CLTCL1-207ENST00000611723 MCTP2Q6DN12 878 aa18.31■□□□□ 0.52
CLTCL1-207ENST00000611723 MCTP1Q6DN14 999 aa18.31■□□□□ 0.52
CLTCL1-207ENST00000611723 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.31■□□□□ 0.52
CLTCL1-207ENST00000611723 MCF2L2Q86YR7 1114 aa18.31■□□□□ 0.52
CLTCL1-207ENST00000611723 CHST13Q8NET6 341 aa18.31■□□□□ 0.52
CLTCL1-207ENST00000611723 OXER1Q8TDS5 423 aa18.31■□□□□ 0.52
CLTCL1-207ENST00000611723 SMCR8Q8TEV9 937 aaPredicted RBP18.31■□□□□ 0.52
CLTCL1-207ENST00000611723 SAGE1Q9NXZ1 904 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms