RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 MYOM1P52179 1685 aa13.72□□□□□ -0.21
CDH1-212ENST00000611625 UTYO14607 1347 aa13.72□□□□□ -0.21
CDH1-212ENST00000611625 ZMYND10O75800 440 aa13.72□□□□□ -0.21
CDH1-212ENST00000611625 STAT1P42224 750 aa13.72□□□□□ -0.21
CDH1-212ENST00000611625 DPP8Q6V1X1 898 aaPredicted RBP13.72□□□□□ -0.21
CDH1-212ENST00000611625 BCAS4Q8TDM0 211 aa13.72□□□□□ -0.21
CDH1-212ENST00000611625 U2AF1L4Q8WU68 220 aaKnown RBP13.72□□□□□ -0.21
CDH1-212ENST00000611625 MTA3Q9BTC8 594 aa13.72□□□□□ -0.21
CDH1-212ENST00000611625 THAP9Q9H5L6 903 aa13.72□□□□□ -0.21
CDH1-212ENST00000611625 SWAP70Q9UH65 585 aa13.72□□□□□ -0.21
CDH1-212ENST00000611625 DDX25Q9UHL0 483 aaKnown RBP13.72□□□□□ -0.21
CDH1-212ENST00000611625 PRR29P0C7W0 189 aa13.72□□□□□ -0.21
CDH1-212ENST00000611625 CAPS2Q9BXY5 557 aa13.72□□□□□ -0.21
CDH1-212ENST00000611625 GDAQ9Y2T3 454 aa13.72□□□□□ -0.21
CDH1-212ENST00000611625 RASSF7Q02833 373 aa13.72□□□□□ -0.21
CDH1-212ENST00000611625 TCP10Q12799 353 aa13.72□□□□□ -0.21
CDH1-212ENST00000611625 MAN2A1Q16706 1144 aa13.72□□□□□ -0.21
CDH1-212ENST00000611625 CEP85LQ5SZL2 805 aa13.72□□□□□ -0.21
CDH1-212ENST00000611625 ARHGEF10LQ9HCE6 1279 aa13.72□□□□□ -0.21
CDH1-212ENST00000611625 USP40Q9NVE5 1235 aa13.72□□□□□ -0.21
CDH1-212ENST00000611625 UBAP1LF5GYI3 381 aa13.71□□□□□ -0.21
CDH1-212ENST00000611625 RCAN1P53805 252 aa13.71□□□□□ -0.21
CDH1-212ENST00000611625 ERFEQ4G0M1 354 aa13.71□□□□□ -0.21
CDH1-212ENST00000611625 BRIP1Q9BX63 1249 aa13.71□□□□□ -0.21
CDH1-212ENST00000611625 AMFRQ9UKV5 643 aa13.71□□□□□ -0.21
CDH1-212ENST00000611625 PARP3Q9Y6F1 533 aa13.71□□□□□ -0.21
CDH1-212ENST00000611625 ARHGEF28Q8N1W1 1705 aaKnown RBP13.71□□□□□ -0.21
CDH1-212ENST00000611625 TECPR2O15040 1411 aa13.71□□□□□ -0.21
CDH1-212ENST00000611625 FOXN1O15353 648 aa13.71□□□□□ -0.21
CDH1-212ENST00000611625 TRIM28Q13263 835 aaKnown RBP13.71□□□□□ -0.21
CDH1-212ENST00000611625 ADAM9Q13443 819 aa13.71□□□□□ -0.21
CDH1-212ENST00000611625 E4F1Q66K89 784 aaPredicted RBP13.71□□□□□ -0.21
CDH1-212ENST00000611625 CCDC170Q8IYT3 715 aa13.71□□□□□ -0.21
CDH1-212ENST00000611625 KIFAP3Q92845 792 aa13.71□□□□□ -0.21
CDH1-212ENST00000611625 SH2D4AQ9H788 454 aa13.71□□□□□ -0.21
CDH1-212ENST00000611625 DISC1Q9NRI5 854 aa13.71□□□□□ -0.21
CDH1-212ENST00000611625 E7EVH7 732 aa13.71□□□□□ -0.22
CDH1-212ENST00000611625 KRT5P13647 590 aa13.71□□□□□ -0.22
CDH1-212ENST00000611625 RFX5P48382 616 aaPredicted RBP13.71□□□□□ -0.22
CDH1-212ENST00000611625 ATP1A2P50993 1020 aa13.71□□□□□ -0.22
CDH1-212ENST00000611625 RBM26Q5T8P6 1007 aaKnown RBP13.71□□□□□ -0.22
CDH1-212ENST00000611625 FBF1Q8TES7 1133 aa13.71□□□□□ -0.22
CDH1-212ENST00000611625 ABCB6Q9NP58 842 aa13.71□□□□□ -0.22
CDH1-212ENST00000611625 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.71□□□□□ -0.22
CDH1-212ENST00000611625 RNF40O75150 1001 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 CFBP00751 764 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 USP17L8P0C7I0 530 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 CTNNA1P35221 906 aaKnown RBP13.7□□□□□ -0.22
CDH1-212ENST00000611625 CC2D1AQ6P1N0 951 aaPredicted RBP13.7□□□□□ -0.22
CDH1-212ENST00000611625 METTL16Q86W50 562 aaKnown RBP13.7□□□□□ -0.22
CDH1-212ENST00000611625 TBCKQ8TEA7 893 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 DPF2Q92785 391 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 DNAI2Q9GZS0 605 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 IQCGQ9H095 443 aaKnown RBP13.7□□□□□ -0.22
CDH1-212ENST00000611625 HOMER2Q9NSB8 354 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 NKIRAS1Q9NYS0 192 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 CEP170BQ9Y4F5 1589 aaPredicted RBP13.7□□□□□ -0.22
CDH1-212ENST00000611625 LMTK3Q96Q04 1460 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 PLCG1P19174 1290 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 CUL4BQ13620 913 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 CASP8Q14790 479 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 ARHGAP44Q17R89 818 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 PRR16Q569H4 304 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 GBP6Q6ZN66 633 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 MAEAQ7L5Y9 396 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 CROCCP2Q86T23 111 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 CTDNEP1O95476 244 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 H2AFZP0C0S5 128 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 BCRP11274 1271 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 ATP2B4P23634 1241 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 CYP27A1Q02318 531 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 GUCY2DQ02846 1103 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 PTPROQ16827 1216 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 H2AFVQ71UI9 128 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 RAB17Q9H0T7 212 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 MORC2Q9Y6X9 1032 aaPredicted RBP13.7□□□□□ -0.22
CDH1-212ENST00000611625 CCDC169A6NNP5 214 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 KRIT1O00522 736 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 KCNJ6P48051 423 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 EHHADHQ08426 723 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 FNBP4Q8N3X1 1017 aaPredicted RBP13.7□□□□□ -0.22
CDH1-212ENST00000611625 MB21D1Q8N884 522 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.7□□□□□ -0.22
CDH1-212ENST00000611625 STK17AQ9UEE5 414 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 AK9Q5TCS8 1911 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 CPDO75976 1380 aa13.7□□□□□ -0.22
CDH1-212ENST00000611625 GSG1L2A8MUP6 293 aa13.69□□□□□ -0.22
CDH1-212ENST00000611625 PPFIA4O75335 1185 aa13.69□□□□□ -0.22
CDH1-212ENST00000611625 NEBLO76041 1014 aa13.69□□□□□ -0.22
CDH1-212ENST00000611625 ATP5DP30049 168 aa13.69□□□□□ -0.22
CDH1-212ENST00000611625 MECOMQ03112 1051 aa13.69□□□□□ -0.22
CDH1-212ENST00000611625 ENAHQ8N8S7 591 aaPredicted RBP13.69□□□□□ -0.22
CDH1-212ENST00000611625 NHEJ1Q9H9Q4 299 aaPredicted RBP13.69□□□□□ -0.22
CDH1-212ENST00000611625 ABCB4P21439 1286 aa13.69□□□□□ -0.22
CDH1-212ENST00000611625 BIRC3Q13489 604 aa13.69□□□□□ -0.22
CDH1-212ENST00000611625 PDIA6Q15084 440 aa13.69□□□□□ -0.22
CDH1-212ENST00000611625 TPH2Q8IWU9 490 aa13.69□□□□□ -0.22
CDH1-212ENST00000611625 FUCA2Q9BTY2 467 aa13.69□□□□□ -0.22
CDH1-212ENST00000611625 TEX33O43247 280 aa13.69□□□□□ -0.22
CDH1-212ENST00000611625 FDPSP14324 419 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms