RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-205ENST00000611150 TMEM53Q6P2H8 277 aa18.96■□□□□ 0.63
CDK11B-205ENST00000611150 ANKS4BQ8N8V4 417 aa18.96■□□□□ 0.63
CDK11B-205ENST00000611150 POLD4Q9HCU8 107 aa18.96■□□□□ 0.63
CDK11B-205ENST00000611150 SALL3Q9BXA9 1300 aa18.96■□□□□ 0.63
CDK11B-205ENST00000611150 H3BQV1 296 aa18.96■□□□□ 0.63
CDK11B-205ENST00000611150 NQO1P15559 274 aaKnown RBP18.96■□□□□ 0.63
CDK11B-205ENST00000611150 BYSLQ13895 437 aaKnown RBP18.96■□□□□ 0.63
CDK11B-205ENST00000611150 PTPN21Q16825 1174 aa18.96■□□□□ 0.63
CDK11B-205ENST00000611150 IFFO2Q5TF58 517 aa18.96■□□□□ 0.63
CDK11B-205ENST00000611150 RAD9BQ6WBX8 426 aa18.96■□□□□ 0.63
CDK11B-205ENST00000611150 MLKLQ8NB16 471 aa18.96■□□□□ 0.63
CDK11B-205ENST00000611150 DDX12PQ92771 950 aa18.96■□□□□ 0.63
CDK11B-205ENST00000611150 CLIP3Q96DZ5 547 aa18.96■□□□□ 0.63
CDK11B-205ENST00000611150 ATP6V1G3Q96LB4 118 aa18.96■□□□□ 0.63
CDK11B-205ENST00000611150 LSG1Q9H089 658 aaKnown RBP18.96■□□□□ 0.63
CDK11B-205ENST00000611150 EFR3BQ9Y2G0 817 aa18.96■□□□□ 0.63
CDK11B-205ENST00000611150 E7ENQ6 273 aa18.95■□□□□ 0.62
CDK11B-205ENST00000611150 HNRNPRO43390 633 aaKnown RBP18.95■□□□□ 0.62
CDK11B-205ENST00000611150 HIP1RO75146 1068 aa18.95■□□□□ 0.62
CDK11B-205ENST00000611150 ARPC4P59998 168 aa18.95■□□□□ 0.62
CDK11B-205ENST00000611150 ITGB3BPQ13352 177 aaPredicted RBP18.95■□□□□ 0.62
CDK11B-205ENST00000611150 P3H1Q32P28 736 aa18.95■□□□□ 0.62
CDK11B-205ENST00000611150 PTPRN2Q92932 1015 aa18.95■□□□□ 0.62
CDK11B-205ENST00000611150 PUS3Q9BZE2 481 aaKnown RBP18.95■□□□□ 0.62
CDK11B-205ENST00000611150 ARHGEF10LQ9HCE6 1279 aa18.95■□□□□ 0.62
CDK11B-205ENST00000611150 ZNF148Q9UQR1 794 aa18.95■□□□□ 0.62
CDK11B-205ENST00000611150 A0A0U1RQJ8 604 aa18.95■□□□□ 0.62
CDK11B-205ENST00000611150 HTR3EA5X5Y0 456 aa18.95■□□□□ 0.62
CDK11B-205ENST00000611150 HOXD11P31277 338 aaPredicted RBP18.95■□□□□ 0.62
CDK11B-205ENST00000611150 USP11P51784 963 aa18.95■□□□□ 0.62
CDK11B-205ENST00000611150 RUFY4Q6ZNE9 571 aa18.95■□□□□ 0.62
CDK11B-205ENST00000611150 CACNA2D4Q7Z3S7 1137 aa18.95■□□□□ 0.62
CDK11B-205ENST00000611150 CPLX4Q7Z7G2 160 aa18.95■□□□□ 0.62
CDK11B-205ENST00000611150 CAVIN3Q969G5 261 aa18.95■□□□□ 0.62
CDK11B-205ENST00000611150 NRDE2Q9H7Z3 1164 aa18.95■□□□□ 0.62
CDK11B-205ENST00000611150 INTS13Q9NVM9 706 aa18.95■□□□□ 0.62
CDK11B-205ENST00000611150 SAR1BQ9Y6B6 198 aa18.95■□□□□ 0.62
CDK11B-205ENST00000611150 AKR1B10O60218 316 aa18.94■□□□□ 0.62
CDK11B-205ENST00000611150 MYCLP1P12525 358 aaPredicted RBP18.94■□□□□ 0.62
CDK11B-205ENST00000611150 CD97P48960 835 aa18.94■□□□□ 0.62
CDK11B-205ENST00000611150 LACTBP83111 547 aaPredicted RBP18.94■□□□□ 0.62
CDK11B-205ENST00000611150 PAK2Q13177 524 aa18.94■□□□□ 0.62
CDK11B-205ENST00000611150 CFAP157Q5JU67 520 aa18.94■□□□□ 0.62
CDK11B-205ENST00000611150 CFAP58Q5T655 872 aa18.94■□□□□ 0.62
CDK11B-205ENST00000611150 TSEN2Q8NCE0 465 aaKnown RBP18.94■□□□□ 0.62
CDK11B-205ENST00000611150 FBF1Q8TES7 1133 aa18.94■□□□□ 0.62
CDK11B-205ENST00000611150 SUCLA2Q9P2R7 463 aaPredicted RBP18.94■□□□□ 0.62
CDK11B-205ENST00000611150 NACC2Q96BF6 587 aa18.93■□□□□ 0.62
CDK11B-205ENST00000611150 HIC2Q96JB3 615 aa18.93■□□□□ 0.62
CDK11B-205ENST00000611150 SMC6Q96SB8 1091 aa18.93■□□□□ 0.62
CDK11B-205ENST00000611150 NAP1L3Q99457 506 aaPredicted RBP18.93■□□□□ 0.62
CDK11B-205ENST00000611150 CTNNAL1Q9UBT7 734 aa18.93■□□□□ 0.62
CDK11B-205ENST00000611150 CHMP2BQ9UQN3 213 aa18.93■□□□□ 0.62
CDK11B-205ENST00000611150 GSTM4Q03013 218 aa18.93■□□□□ 0.62
CDK11B-205ENST00000611150 CCDC102BQ68D86 513 aa18.93■□□□□ 0.62
CDK11B-205ENST00000611150 MAEAQ7L5Y9 396 aa18.93■□□□□ 0.62
CDK11B-205ENST00000611150 CD302Q8IX05 232 aa18.93■□□□□ 0.62
CDK11B-205ENST00000611150 SREK1Q8WXA9 508 aaKnown RBP18.93■□□□□ 0.62
CDK11B-205ENST00000611150 NCSTNQ92542 709 aa18.93■□□□□ 0.62
CDK11B-205ENST00000611150 SNX27Q96L92 541 aa18.93■□□□□ 0.62
CDK11B-205ENST00000611150 GBP5Q96PP8 586 aa18.93■□□□□ 0.62
CDK11B-205ENST00000611150 SH3GL1Q99961 368 aa18.93■□□□□ 0.62
CDK11B-205ENST00000611150 DDX21Q9NR30 783 aaKnown RBP eCLIP18.93■□□□□ 0.62
CDK11B-205ENST00000611150 EXOC1Q9NV70 894 aa18.93■□□□□ 0.62
CDK11B-205ENST00000611150 TBX22Q9Y458 520 aa18.93■□□□□ 0.62
CDK11B-205ENST00000611150 KIF1BO60333 1816 aa18.93■□□□□ 0.62
CDK11B-205ENST00000611150 XIRP1Q702N8 1843 aaKnown RBP18.93■□□□□ 0.62
CDK11B-205ENST00000611150 KIAA0232Q92628 1395 aa18.93■□□□□ 0.62
CDK11B-205ENST00000611150 NWD1Q149M9 1564 aa18.93■□□□□ 0.62
CDK11B-205ENST00000611150 TUBGCP6Q96RT7 1819 aa18.93■□□□□ 0.62
CDK11B-205ENST00000611150 TESPA1A2RU30 521 aaPredicted RBP18.92■□□□□ 0.62
CDK11B-205ENST00000611150 LDHAP00338 332 aaKnown RBP18.92■□□□□ 0.62
CDK11B-205ENST00000611150 ACADSP16219 412 aa18.92■□□□□ 0.62
CDK11B-205ENST00000611150 GBP1P32455 592 aa18.92■□□□□ 0.62
CDK11B-205ENST00000611150 MCL1Q07820 350 aa18.92■□□□□ 0.62
CDK11B-205ENST00000611150 ANKRD1Q15327 319 aa18.92■□□□□ 0.62
CDK11B-205ENST00000611150 IRGCQ6NXR0 463 aa18.92■□□□□ 0.62
CDK11B-205ENST00000611150 DEPTORQ8TB45 409 aa18.92■□□□□ 0.62
CDK11B-205ENST00000611150 CAGE1Q8TC20 777 aa18.92■□□□□ 0.62
CDK11B-205ENST00000611150 AZIN2Q96A70 460 aa18.92■□□□□ 0.62
CDK11B-205ENST00000611150 ALDH5A1P51649 535 aaPredicted RBP18.92■□□□□ 0.62
CDK11B-205ENST00000611150 POLA2Q14181 598 aa18.92■□□□□ 0.62
CDK11B-205ENST00000611150 TSR1Q2NL82 804 aaKnown RBP18.92■□□□□ 0.62
CDK11B-205ENST00000611150 FOXB2Q5VYV0 432 aa18.92■□□□□ 0.62
CDK11B-205ENST00000611150 OTUD6AQ7L8S5 288 aa18.92■□□□□ 0.62
CDK11B-205ENST00000611150 TRIM50Q86XT4 487 aa18.92■□□□□ 0.62
CDK11B-205ENST00000611150 CCDC197Q8NCU1 140 aa18.92■□□□□ 0.62
CDK11B-205ENST00000611150 LNPEPQ9UIQ6 1025 aa18.92■□□□□ 0.62
CDK11B-205ENST00000611150 IFIT3O14879 490 aaKnown RBP18.91■□□□□ 0.62
CDK11B-205ENST00000611150 LONP2Q86WA8 852 aa18.91■□□□□ 0.62
CDK11B-205ENST00000611150 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.91■□□□□ 0.62
CDK11B-205ENST00000611150 UHMK1Q8TAS1 419 aaKnown RBP18.91■□□□□ 0.62
CDK11B-205ENST00000611150 DUSP9Q99956 384 aaKnown RBP18.91■□□□□ 0.62
CDK11B-205ENST00000611150 SIL1Q9H173 461 aa18.91■□□□□ 0.62
CDK11B-205ENST00000611150 STAP2Q9UGK3 403 aa18.91■□□□□ 0.62
CDK11B-205ENST00000611150 ALKQ9UM73 1620 aa18.91■□□□□ 0.62
CDK11B-205ENST00000611150 CHD2O14647 1828 aaKnown RBP18.91■□□□□ 0.62
CDK11B-205ENST00000611150 DIP2AQ14689 1571 aa18.91■□□□□ 0.62
CDK11B-205ENST00000611150 hCG_2014768A0A024R1R8 64 aa18.91■□□□□ 0.62
CDK11B-205ENST00000611150 CETN3O15182 167 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms