RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 RBAK-RBAKDNI3L0D1 243 aa14.07□□□□□ -0.16
FDPS-220ENST00000611010 GPAA1O43292 621 aa14.07□□□□□ -0.16
FDPS-220ENST00000611010 B4GALT4O60513 344 aa14.07□□□□□ -0.16
FDPS-220ENST00000611010 ZBED4O75132 1171 aa14.07□□□□□ -0.16
FDPS-220ENST00000611010 SMPD1P17405 629 aa14.07□□□□□ -0.16
FDPS-220ENST00000611010 RABGGTBP53611 331 aa14.07□□□□□ -0.16
FDPS-220ENST00000611010 OAZ1P54368 228 aa14.07□□□□□ -0.16
FDPS-220ENST00000611010 CCL23P55773 120 aa14.07□□□□□ -0.16
FDPS-220ENST00000611010 PSMC6P62333 389 aa14.07□□□□□ -0.16
FDPS-220ENST00000611010 GIMAP6Q6P9H5 292 aa14.07□□□□□ -0.16
FDPS-220ENST00000611010 OTOP2Q7RTS6 562 aa14.07□□□□□ -0.16
FDPS-220ENST00000611010 KBTBD3Q8NAB2 608 aa14.07□□□□□ -0.16
FDPS-220ENST00000611010 APPBP2Q92624 585 aa14.07□□□□□ -0.16
FDPS-220ENST00000611010 DDRGK1Q96HY6 314 aa14.07□□□□□ -0.16
FDPS-220ENST00000611010 AGBL1Q96MI9 1066 aa14.07□□□□□ -0.16
FDPS-220ENST00000611010 PURBQ96QR8 312 aaKnown RBP14.07□□□□□ -0.16
FDPS-220ENST00000611010 TRPV6Q9H1D0 765 aa14.07□□□□□ -0.16
FDPS-220ENST00000611010 HIPK3Q9H422 1215 aa14.07□□□□□ -0.16
FDPS-220ENST00000611010 MKNK2Q9HBH9 465 aa14.07□□□□□ -0.16
FDPS-220ENST00000611010 FEM1BQ9UK73 627 aa14.07□□□□□ -0.16
FDPS-220ENST00000611010 DDX19BQ9UMR2 479 aa14.07□□□□□ -0.16
FDPS-220ENST00000611010 FOXP2O15409 715 aa14.06□□□□□ -0.16
FDPS-220ENST00000611010 ARHGEF15O94989 841 aa14.06□□□□□ -0.16
FDPS-220ENST00000611010 TNFAIP2Q03169 654 aa14.06□□□□□ -0.16
FDPS-220ENST00000611010 RAB30Q15771 203 aa14.06□□□□□ -0.16
FDPS-220ENST00000611010 MUM1L1Q5H9M0 696 aa14.06□□□□□ -0.16
FDPS-220ENST00000611010 TAPT1Q6NXT6 567 aa14.06□□□□□ -0.16
FDPS-220ENST00000611010 FBXO16Q8IX29 292 aaPredicted RBP14.06□□□□□ -0.16
FDPS-220ENST00000611010 VTI1AQ96AJ9 217 aa14.06□□□□□ -0.16
FDPS-220ENST00000611010 CHMP4CQ96CF2 233 aa14.06□□□□□ -0.16
FDPS-220ENST00000611010 SCLYQ96I15 445 aa14.06□□□□□ -0.16
FDPS-220ENST00000611010 ACAD9Q9H845 621 aa14.06□□□□□ -0.16
FDPS-220ENST00000611010 RNF146Q9NTX7 359 aa14.06□□□□□ -0.16
FDPS-220ENST00000611010 FBXO40Q9UH90 709 aa14.06□□□□□ -0.16
FDPS-220ENST00000611010 TRIP12Q14669 1992 aaPredicted RBP14.05□□□□□ -0.16
FDPS-220ENST00000611010 EPOPA6NHQ4 379 aa14.05□□□□□ -0.16
FDPS-220ENST00000611010 TMEM232C9JQI7 657 aa14.05□□□□□ -0.16
FDPS-220ENST00000611010 TLR3O15455 904 aaKnown RBP14.05□□□□□ -0.16
FDPS-220ENST00000611010 TTLL1O95922 423 aa14.05□□□□□ -0.16
FDPS-220ENST00000611010 BMP3P12645 472 aa14.05□□□□□ -0.16
FDPS-220ENST00000611010 IGFBP4P22692 258 aa14.05□□□□□ -0.16
FDPS-220ENST00000611010 SNAP25P60880 206 aa14.05□□□□□ -0.16
FDPS-220ENST00000611010 TFF2Q03403 129 aa14.05□□□□□ -0.16
FDPS-220ENST00000611010 ITGA7Q13683 1181 aa14.05□□□□□ -0.16
FDPS-220ENST00000611010 FSCN1Q16658 493 aaKnown RBP14.05□□□□□ -0.16
FDPS-220ENST00000611010 C20orf194Q5TEA3 1177 aa14.05□□□□□ -0.16
FDPS-220ENST00000611010 SLFN13Q68D06 897 aa14.05□□□□□ -0.16
FDPS-220ENST00000611010 ZSCAN25Q6NSZ9 544 aa14.05□□□□□ -0.16
FDPS-220ENST00000611010 UHRF1Q96T88 793 aaPredicted RBP14.05□□□□□ -0.16
FDPS-220ENST00000611010 SEC62Q99442 399 aaKnown RBP14.05□□□□□ -0.16
FDPS-220ENST00000611010 LRRCC1Q9C099 1032 aa14.05□□□□□ -0.16
FDPS-220ENST00000611010 SPC25Q9HBM1 224 aa14.05□□□□□ -0.16
FDPS-220ENST00000611010 SYNPO2Q9UMS6 1093 aa14.05□□□□□ -0.16
FDPS-220ENST00000611010 MRPS5P82675 430 aaKnown RBP14.04□□□□□ -0.16
FDPS-220ENST00000611010 CCDC174Q6PII3 467 aa14.04□□□□□ -0.16
FDPS-220ENST00000611010 NEDD1Q8NHV4 660 aa14.04□□□□□ -0.16
FDPS-220ENST00000611010 ECHDC1Q9NTX5 307 aa14.04□□□□□ -0.16
FDPS-220ENST00000611010 BRWD1Q9NSI6 2320 aa14.03□□□□□ -0.16
FDPS-220ENST00000611010 RNF113AO15541 343 aaKnown RBP14.03□□□□□ -0.16
FDPS-220ENST00000611010 FGBP02675 491 aa14.03□□□□□ -0.16
FDPS-220ENST00000611010 TDO2P48775 406 aa14.03□□□□□ -0.16
FDPS-220ENST00000611010 KCNQ1P51787 676 aa14.03□□□□□ -0.16
FDPS-220ENST00000611010 STAT2P52630 851 aa14.03□□□□□ -0.16
FDPS-220ENST00000611010 TTLL4Q14679 1199 aa14.03□□□□□ -0.16
FDPS-220ENST00000611010 EEPD1Q7L9B9 569 aa14.03□□□□□ -0.16
FDPS-220ENST00000611010 SPRED2Q7Z698 418 aa14.03□□□□□ -0.16
FDPS-220ENST00000611010 IFNL3Q8IZI9 196 aa14.03□□□□□ -0.16
FDPS-220ENST00000611010 PPP1R13LQ8WUF5 828 aa14.03□□□□□ -0.16
FDPS-220ENST00000611010 GMCL1Q96IK5 515 aa14.03□□□□□ -0.16
FDPS-220ENST00000611010 CRBNQ96SW2 442 aa14.03□□□□□ -0.16
FDPS-220ENST00000611010 SLC28A3Q9HAS3 691 aa14.03□□□□□ -0.16
FDPS-220ENST00000611010 CYP39A1Q9NYL5 469 aa14.03□□□□□ -0.16
FDPS-220ENST00000611010 MSRAQ9UJ68 235 aa14.03□□□□□ -0.16
FDPS-220ENST00000611010 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.03□□□□□ -0.16
FDPS-220ENST00000611010 KIAA1217Q5T5P2 1943 aa14.02□□□□□ -0.16
FDPS-220ENST00000611010 RFXAPO00287 272 aa14.02□□□□□ -0.17
FDPS-220ENST00000611010 DYNC1LI2O43237 492 aaPredicted RBP14.02□□□□□ -0.17
FDPS-220ENST00000611010 NMT2O60551 498 aa14.02□□□□□ -0.17
FDPS-220ENST00000611010 ALAS1P13196 640 aa14.02□□□□□ -0.17
FDPS-220ENST00000611010 BMP1P13497 986 aa14.02□□□□□ -0.17
FDPS-220ENST00000611010 PPP2R2DQ66LE6 453 aa14.02□□□□□ -0.17
FDPS-220ENST00000611010 KRT40Q6A162 431 aa14.02□□□□□ -0.17
FDPS-220ENST00000611010 KCTD1Q719H9 257 aa14.02□□□□□ -0.17
FDPS-220ENST00000611010 MORC4Q8TE76 937 aa14.02□□□□□ -0.17
FDPS-220ENST00000611010 TRERF1Q96PN7 1200 aa14.02□□□□□ -0.17
FDPS-220ENST00000611010 ALDH8A1Q9H2A2 487 aaPredicted RBP14.02□□□□□ -0.17
FDPS-220ENST00000611010 INCENPQ9NQS7 918 aa14.02□□□□□ -0.17
FDPS-220ENST00000611010 IL17RBQ9NRM6 502 aa14.02□□□□□ -0.17
FDPS-220ENST00000611010 TRMT13Q9NUP7 481 aaKnown RBP14.02□□□□□ -0.17
FDPS-220ENST00000611010 CTDP1Q9Y5B0 961 aaPredicted RBP14.02□□□□□ -0.17
FDPS-220ENST00000611010 SIP14410 1827 aa14.01□□□□□ -0.17
FDPS-220ENST00000611010 CABYRO75952 493 aa14.01□□□□□ -0.17
FDPS-220ENST00000611010 CYP2C9P11712 490 aa14.01□□□□□ -0.17
FDPS-220ENST00000611010 MCCP23508 829 aa14.01□□□□□ -0.17
FDPS-220ENST00000611010 NOL8Q76FK4 1167 aaKnown RBP14.01□□□□□ -0.17
FDPS-220ENST00000611010 MICALL1Q8N3F8 863 aa14.01□□□□□ -0.17
FDPS-220ENST00000611010 STAG1Q8WVM7 1258 aa14.01□□□□□ -0.17
FDPS-220ENST00000611010 PRR12Q9ULL5 1215 aa14.01□□□□□ -0.17
FDPS-220ENST00000611010 PCDHA11Q9Y5I1 949 aa14.01□□□□□ -0.17
FDPS-220ENST00000611010 ATG2AQ2TAZ0 1938 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms