RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 CYBAP13498 195 aa16.61■□□□□ 0.25
HDDC2-209ENST00000609477 CYP2C19P33261 490 aa16.61■□□□□ 0.25
HDDC2-209ENST00000609477 RCAN1P53805 252 aa16.61■□□□□ 0.25
HDDC2-209ENST00000609477 SNAP25P60880 206 aa16.61■□□□□ 0.25
HDDC2-209ENST00000609477 CDC37Q16543 378 aaPredicted RBP16.61■□□□□ 0.25
HDDC2-209ENST00000609477 ADCK5Q3MIX3 580 aa16.61■□□□□ 0.25
HDDC2-209ENST00000609477 SYNE3Q6ZMZ3 975 aa16.61■□□□□ 0.25
HDDC2-209ENST00000609477 FAM133AQ8N9E0 248 aa16.61■□□□□ 0.25
HDDC2-209ENST00000609477 SENP2Q9HC62 589 aa16.61■□□□□ 0.25
HDDC2-209ENST00000609477 CYP39A1Q9NYL5 469 aa16.61■□□□□ 0.25
HDDC2-209ENST00000609477 SNX14Q9Y5W7 946 aa16.61■□□□□ 0.25
HDDC2-209ENST00000609477 ABCB11O95342 1321 aa16.61■□□□□ 0.25
HDDC2-209ENST00000609477 BRCA2P51587 3418 aa16.6■□□□□ 0.25
HDDC2-209ENST00000609477 ZBTB5O15062 677 aa16.6■□□□□ 0.25
HDDC2-209ENST00000609477 TFRCP02786 760 aaKnown RBP16.6■□□□□ 0.25
HDDC2-209ENST00000609477 PPP2R5BQ15173 497 aa16.6■□□□□ 0.25
HDDC2-209ENST00000609477 MUM1L1Q5H9M0 696 aa16.6■□□□□ 0.25
HDDC2-209ENST00000609477 MCF2L2Q86YR7 1114 aa16.6■□□□□ 0.25
HDDC2-209ENST00000609477 SAMD3Q8N6K7 520 aa16.6■□□□□ 0.25
HDDC2-209ENST00000609477 AMNQ9BXJ7 453 aa16.6■□□□□ 0.25
HDDC2-209ENST00000609477 MAP3K20Q9NYL2 800 aaKnown RBP16.6■□□□□ 0.25
HDDC2-209ENST00000609477 ADD3Q9UEY8 706 aaKnown RBP16.6■□□□□ 0.25
HDDC2-209ENST00000609477 OGDHLQ9ULD0 1010 aa16.6■□□□□ 0.25
HDDC2-209ENST00000609477 CNPY2Q9Y2B0 182 aa16.6■□□□□ 0.25
HDDC2-209ENST00000609477 ASB14A6NK59 587 aa16.59■□□□□ 0.25
HDDC2-209ENST00000609477 SEPT4O43236 478 aa16.59■□□□□ 0.25
HDDC2-209ENST00000609477 QRICH1Q2TAL8 776 aa16.59■□□□□ 0.25
HDDC2-209ENST00000609477 BLOC1S2Q6QNY1 142 aa16.59■□□□□ 0.25
HDDC2-209ENST00000609477 FBXO11Q86XK2 927 aa16.59■□□□□ 0.25
HDDC2-209ENST00000609477 NUP133Q8WUM0 1156 aa16.59■□□□□ 0.25
HDDC2-209ENST00000609477 CLEC4DQ8WXI8 215 aa16.59■□□□□ 0.25
HDDC2-209ENST00000609477 SHISA4Q96DD7 197 aa16.59■□□□□ 0.25
HDDC2-209ENST00000609477 SPZ1Q9BXG8 430 aa16.59■□□□□ 0.25
HDDC2-209ENST00000609477 TM6SF1Q9BZW5 370 aa16.59■□□□□ 0.25
HDDC2-209ENST00000609477 CPVLQ9H3G5 476 aa16.59■□□□□ 0.25
HDDC2-209ENST00000609477 DDX20Q9UHI6 824 aaKnown RBP16.59■□□□□ 0.25
HDDC2-209ENST00000609477 MRPL11Q9Y3B7 192 aaKnown RBP16.59■□□□□ 0.25
HDDC2-209ENST00000609477 MYH6P13533 1939 aa16.58■□□□□ 0.25
HDDC2-209ENST00000609477 B4DLN1 442 aa16.58■□□□□ 0.24
HDDC2-209ENST00000609477 CCND3P30281 292 aaPredicted RBP16.58■□□□□ 0.24
HDDC2-209ENST00000609477 MRPL12P52815 198 aaKnown RBP16.58■□□□□ 0.24
HDDC2-209ENST00000609477 LHX8Q68G74 356 aa16.58■□□□□ 0.24
HDDC2-209ENST00000609477 NSMFQ6X4W1 530 aa16.58■□□□□ 0.24
HDDC2-209ENST00000609477 RNF207Q6ZRF8 634 aa16.58■□□□□ 0.24
HDDC2-209ENST00000609477 FANCBQ8NB91 859 aa16.58■□□□□ 0.24
HDDC2-209ENST00000609477 JAKMIP1Q96N16 626 aaKnown RBP16.58■□□□□ 0.24
HDDC2-209ENST00000609477 MPHOSPH6Q99547 160 aaKnown RBP16.58■□□□□ 0.24
HDDC2-209ENST00000609477 ABHD16BQ9H3Z7 469 aa16.58■□□□□ 0.24
HDDC2-209ENST00000609477 VAT1LQ9HCJ6 419 aa16.58■□□□□ 0.24
HDDC2-209ENST00000609477 RBM28Q9NW13 759 aaKnown RBP16.58■□□□□ 0.24
HDDC2-209ENST00000609477 SMCHD1A6NHR9 2005 aa16.57■□□□□ 0.24
HDDC2-209ENST00000609477 PNMA6FA0A0J9YX94 578 aa16.57■□□□□ 0.24
HDDC2-209ENST00000609477 NFIBO00712 420 aa16.57■□□□□ 0.24
HDDC2-209ENST00000609477 CNGA1P29973 690 aa16.57■□□□□ 0.24
HDDC2-209ENST00000609477 ANAPC15P60006 121 aa16.57■□□□□ 0.24
HDDC2-209ENST00000609477 FGD1P98174 961 aa16.57■□□□□ 0.24
HDDC2-209ENST00000609477 APOA5Q6Q788 366 aa16.57■□□□□ 0.24
HDDC2-209ENST00000609477 UBE2Q1Q7Z7E8 422 aa16.57■□□□□ 0.24
HDDC2-209ENST00000609477 DNERQ8NFT8 737 aa16.57■□□□□ 0.24
HDDC2-209ENST00000609477 AGXT2Q9BYV1 514 aa16.57■□□□□ 0.24
HDDC2-209ENST00000609477 GPHNQ9NQX3 736 aaPredicted RBP16.57■□□□□ 0.24
HDDC2-209ENST00000609477 PTPDC1A2A3K4 754 aa16.56■□□□□ 0.24
HDDC2-209ENST00000609477 CYTH3O43739 400 aa16.56■□□□□ 0.24
HDDC2-209ENST00000609477 SNAI1O95863 264 aaPredicted RBP16.56■□□□□ 0.24
HDDC2-209ENST00000609477 RPS6KB1P23443 525 aa16.56■□□□□ 0.24
HDDC2-209ENST00000609477 CNTN2Q02246 1040 aa16.56■□□□□ 0.24
HDDC2-209ENST00000609477 GHRHRQ02643 423 aa16.56■□□□□ 0.24
HDDC2-209ENST00000609477 BAATQ14032 418 aaPredicted RBP16.56■□□□□ 0.24
HDDC2-209ENST00000609477 COL9A3Q14050 684 aaPredicted RBP16.56■□□□□ 0.24
HDDC2-209ENST00000609477 USH1GQ495M9 461 aa16.56■□□□□ 0.24
HDDC2-209ENST00000609477 RUFY3Q7L099 469 aa16.56■□□□□ 0.24
HDDC2-209ENST00000609477 ARMCX2Q7L311 632 aa16.56■□□□□ 0.24
HDDC2-209ENST00000609477 TRPV1Q8NER1 839 aa16.56■□□□□ 0.24
HDDC2-209ENST00000609477 MORC4Q8TE76 937 aa16.56■□□□□ 0.24
HDDC2-209ENST00000609477 RRP36Q96EU6 259 aaKnown RBP16.56■□□□□ 0.24
HDDC2-209ENST00000609477 FGD4Q96M96 766 aa16.56■□□□□ 0.24
HDDC2-209ENST00000609477 LRRC2Q9BYS8 371 aa16.56■□□□□ 0.24
HDDC2-209ENST00000609477 ZSWIM6Q9HCJ5 1215 aa16.56■□□□□ 0.24
HDDC2-209ENST00000609477 PCDHA1Q9Y5I3 950 aa16.56■□□□□ 0.24
HDDC2-209ENST00000609477 TNRC18O15417 2968 aaPredicted RBP16.56■□□□□ 0.24
HDDC2-209ENST00000609477 CCDC196A0A1B0GTZ2 297 aa16.55■□□□□ 0.24
HDDC2-209ENST00000609477 SOWAHBA6NEL2 793 aa16.55■□□□□ 0.24
HDDC2-209ENST00000609477 ZBTB43O43298 467 aa16.55■□□□□ 0.24
HDDC2-209ENST00000609477 FARP2O94887 1054 aaPredicted RBP16.55■□□□□ 0.24
HDDC2-209ENST00000609477 ZNF865P0CJ78 1059 aaPredicted RBP16.55■□□□□ 0.24
HDDC2-209ENST00000609477 AKR1A1P14550 325 aa16.55■□□□□ 0.24
HDDC2-209ENST00000609477 CASTP20810 708 aaKnown RBP16.55■□□□□ 0.24
HDDC2-209ENST00000609477 RPS6P62753 249 aaKnown RBP16.55■□□□□ 0.24
HDDC2-209ENST00000609477 CCDC144CPQ8IYA2 1237 aa16.55■□□□□ 0.24
HDDC2-209ENST00000609477 ARRDC4Q8NCT1 418 aa16.55■□□□□ 0.24
HDDC2-209ENST00000609477 PIGSQ96S52 555 aa16.55■□□□□ 0.24
HDDC2-209ENST00000609477 MYL10Q9BUA6 226 aa16.55■□□□□ 0.24
HDDC2-209ENST00000609477 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.55■□□□□ 0.24
HDDC2-209ENST00000609477 SEC63Q9UGP8 760 aaKnown RBP16.55■□□□□ 0.24
HDDC2-209ENST00000609477 FAM184BQ9ULE4 1060 aa16.55■□□□□ 0.24
HDDC2-209ENST00000609477 EVCP57679 992 aa16.54■□□□□ 0.24
HDDC2-209ENST00000609477 ACVR2BQ13705 512 aa16.54■□□□□ 0.24
HDDC2-209ENST00000609477 SLC35G1Q2M3R5 365 aa16.54■□□□□ 0.24
HDDC2-209ENST00000609477 Q6ZUG5 572 aa16.54■□□□□ 0.24
HDDC2-209ENST00000609477 NECAB2Q7Z6G3 386 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms