RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 DISP1Q96F81 1524 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 SGSM2O43147 1006 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 XRCC5P13010 732 aaKnown RBP4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 GSPT1P15170 499 aaKnown RBP4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 ACTN2P35609 894 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 ZNF75DP51815 510 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 CORO7P57737 925 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 ERVK-24P63145 666 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 EXOSC9Q06265 439 aaKnown RBP4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 TPD52L1Q16890 204 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 HSP90AB3PQ58FF7 597 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 SYT10Q6XYQ8 523 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 CCDC186Q7Z3E2 898 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 ANKLE2Q86XL3 938 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 CERS3Q8IU89 383 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 LRRC8AQ8IWT6 810 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 REXO1L1PQ8IX06 675 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 SIRT2Q8IXJ6 389 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 RPAP2Q8IXW5 612 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 BHLHE22Q8NFJ8 381 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 EPS8L3Q8TE67 593 aaKnown RBP4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 PPM1EQ8WY54 764 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 MRFAP1L1Q96HT8 127 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 CSRNP1Q96S65 589 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 PLEKHF1Q96S99 279 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 FOXQ1Q9C009 403 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 FAM107BQ9H098 131 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 PRDM5Q9NQX1 630 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 PLAGL2Q9UPG8 496 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 USTQ9Y2C2 406 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 RRP15Q9Y3B9 282 aaKnown RBP4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 U3KQE9 123 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 NSD2O96028 1365 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 SPHKAPQ2M3C7 1700 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 ABCA6Q8N139 1617 aa4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 MYO3AQ8NEV4 1616 aa4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 ERICH4A6NGS2 130 aa4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 FAM155AB1AL88 458 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 NFIBO00712 420 aa4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 CCP110O43303 1012 aa4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 ZSCAN22P10073 491 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 PTGS1P23219 599 aa4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 ARNTP27540 789 aa4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 CALRP27797 417 aaKnown RBP4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 CLCN7P51798 805 aa4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 GSDMDP57764 484 aa4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 TTC31Q49AM3 519 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 CCDC158Q5M9N0 1113 aa4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 JAKMIP3Q5VZ66 844 aa4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 MCTP2Q6DN12 878 aa4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 TMCO3Q6UWJ1 677 aa4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 KRBA2Q6ZNG9 492 aa4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 MMS22LQ6ZRQ5 1243 aa4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 SYDE1Q6ZW31 735 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 EGFL6Q8IUX8 553 aa4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 HOMEZQ8IX15 550 aa4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 CCAR2Q8N163 923 aaKnown RBP4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 GPBAR1Q8TDU6 330 aa4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 CACTINQ8WUQ7 758 aaKnown RBP4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 KIRREL1Q96J84 757 aa4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 CXorf56Q9H5V9 222 aa4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 IMPACTQ9P2X3 320 aa4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 KCNG1Q9UIX4 513 aa4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 PCDHGC5Q9Y5F6 944 aa4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 CSADQ9Y600 493 aa4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 TUBGCP6Q96RT7 1819 aa4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 TDRD9Q8NDG6 1382 aaKnown RBP4.73□□□□□ -1.65
HMGB1P50-201ENST00000605814 ABCC4O15439 1325 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 SPAG9O60271 1321 aaKnown RBP4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 RGS12O14924 1447 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 FAM135BQ49AJ0 1406 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 ASXL2Q76L83 1435 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 A0A087WUV0 522 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 CCDC189A1A4V9 331 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 EFCAB8A8MWE9 144 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 MAP2K7O14733 419 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 PPP1R12AO14974 1030 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 GPR182O15218 404 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 TUBBP07437 444 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 SDSP20132 328 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 NME2P22392 152 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 TMPOP42166 694 aaKnown RBP4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 NEK4P51957 841 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 ARHGAP4P98171 946 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 MAP3K11Q16584 847 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 ZC3H12AQ5D1E8 599 aaKnown RBP4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 TMEM67Q5HYA8 995 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 CT47A1Q5JQC4 288 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 PPM1JQ5JR12 505 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 CYFIP1Q7L576 1253 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 LRRC56Q8IYG6 542 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 C10orf67Q8IYJ2 551 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 ANKRD44Q8N8A2 993 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 KCT2Q8NC54 265 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 CCDC191Q8NCU4 936 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 HNRNPLLQ8WVV9 542 aaKnown RBP4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 ELMO3Q96BJ8 720 aa4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 LIN37Q96GY3 246 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P50-201ENST00000605814 C16orf45Q96MC5 204 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms