RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 CALD1Q05682 793 aaKnown RBP3.5□□□□□ -1.85
VCAM1-205ENST00000603679 PAK2Q13177 524 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 VGLL4Q14135 290 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 TAF1CQ15572 869 aaPredicted RBP3.5□□□□□ -1.85
VCAM1-205ENST00000603679 NBPF20Q3BBV1 942 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 APOBEC3HQ6NTF7 200 aaKnown RBP3.5□□□□□ -1.85
VCAM1-205ENST00000603679 BRICD5Q6PL45 260 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 COPS6Q7L5N1 327 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 KIAA0907Q7Z7F0 614 aaPredicted RBP3.5□□□□□ -1.85
VCAM1-205ENST00000603679 PHOSPHO2Q8TCD6 241 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.5□□□□□ -1.85
VCAM1-205ENST00000603679 LPAR1Q92633 364 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 CCDC34Q96HJ3 373 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.5□□□□□ -1.85
VCAM1-205ENST00000603679 ZNF700Q9H0M5 742 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 NUDCQ9Y266 331 aa3.5□□□□□ -1.85
VCAM1-205ENST00000603679 NEURL1BA8MQ27 555 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 MPHOSPH10O00566 681 aaKnown RBP3.49□□□□□ -1.85
VCAM1-205ENST00000603679 FARP2O94887 1054 aaPredicted RBP3.49□□□□□ -1.85
VCAM1-205ENST00000603679 SSBP05455 408 aaKnown RBP eCLIP3.49□□□□□ -1.85
VCAM1-205ENST00000603679 PPP4CP60510 307 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 DCAF15Q66K64 600 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 PPP4R4Q6NUP7 873 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 KSR2Q6VAB6 950 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 SH3BP5LQ7L8J4 393 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 NECAB2Q7Z6G3 386 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 TMTC2Q8N394 836 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 C8orf58Q8NAV2 365 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 OPTNQ96CV9 577 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 MYO19Q96H55 970 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 SCYL1Q96KG9 808 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 SNX27Q96L92 541 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 CFAP53Q96M91 514 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 SRPK1Q96SB4 655 aaKnown RBP3.49□□□□□ -1.85
VCAM1-205ENST00000603679 SRCIN1Q9C0H9 1055 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 NIF3L1Q9GZT8 377 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 ZNF358Q9NW07 568 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.49□□□□□ -1.85
VCAM1-205ENST00000603679 GGT7Q9UJ14 662 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 SLC15A5A6NIM6 579 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 MYCP01106 439 aaPredicted RBP3.49□□□□□ -1.85
VCAM1-205ENST00000603679 CCNYL3P0C7X3 344 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 HOXC8P31273 242 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 CHMP4BP1P59074 171 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 HDAC1Q13547 482 aaPredicted RBP3.49□□□□□ -1.85
VCAM1-205ENST00000603679 POTEEQ6S8J3 1075 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 LAPTM4BQ86VI4 370 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 PDILTQ8N807 584 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 TSEN2Q8NCE0 465 aaKnown RBP3.49□□□□□ -1.85
VCAM1-205ENST00000603679 SLC39A7Q92504 469 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 TTYH1Q9H313 450 aaPredicted RBP3.49□□□□□ -1.85
VCAM1-205ENST00000603679 SLC27A5Q9Y2P5 690 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 COMMD10Q9Y6G5 202 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 KLF4O43474 513 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 PPP1R12BO60237 982 aaPredicted RBP3.49□□□□□ -1.85
VCAM1-205ENST00000603679 CAND2O75155 1236 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 CTHP32929 405 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 NOS2P35228 1153 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 RAB33AQ14088 237 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 GCKRQ14397 625 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 NBPF9Q3BBW0 867 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 SCYL3Q8IZE3 742 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 ANP32BQ92688 251 aaKnown RBP3.49□□□□□ -1.85
VCAM1-205ENST00000603679 C12orf49Q9H741 205 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 GPR108Q9NPR9 543 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 KIAA1468Q9P260 1216 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 TRANK1O15050 2925 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 ZMYM6O95789 1325 aa3.49□□□□□ -1.85
VCAM1-205ENST00000603679 PES1O00541 588 aaKnown RBP3.48□□□□□ -1.85
VCAM1-205ENST00000603679 PLIN1O60240 522 aa3.48□□□□□ -1.85
VCAM1-205ENST00000603679 PPFIA4O75335 1185 aa3.48□□□□□ -1.85
VCAM1-205ENST00000603679 DDX58O95786 925 aaKnown RBP3.48□□□□□ -1.85
VCAM1-205ENST00000603679 HOXD8P13378 290 aaPredicted RBP3.48□□□□□ -1.85
VCAM1-205ENST00000603679 PWP1Q13610 501 aa3.48□□□□□ -1.85
VCAM1-205ENST00000603679 CAPN12Q6ZSI9 719 aa3.48□□□□□ -1.85
VCAM1-205ENST00000603679 RPS6KC1Q96S38 1066 aa3.48□□□□□ -1.85
VCAM1-205ENST00000603679 RSRP1Q9BUV0 290 aa3.48□□□□□ -1.85
VCAM1-205ENST00000603679 TRIM55Q9BYV6 548 aa3.48□□□□□ -1.85
VCAM1-205ENST00000603679 RNF19AQ9NV58 838 aa3.48□□□□□ -1.85
VCAM1-205ENST00000603679 CWC25Q9NXE8 425 aaPredicted RBP3.48□□□□□ -1.85
VCAM1-205ENST00000603679 MAP10Q9P2G4 905 aa3.48□□□□□ -1.85
VCAM1-205ENST00000603679 TBX21Q9UL17 535 aa3.48□□□□□ -1.85
VCAM1-205ENST00000603679 SCN5AQ14524 2016 aa3.48□□□□□ -1.85
VCAM1-205ENST00000603679 TSPY2A6NKD2 308 aa3.48□□□□□ -1.85
VCAM1-205ENST00000603679 SMAPO00193 183 aa3.48□□□□□ -1.85
VCAM1-205ENST00000603679 IRS4O14654 1257 aaPredicted RBP3.48□□□□□ -1.85
VCAM1-205ENST00000603679 TNFRSF10BO14763 440 aa3.48□□□□□ -1.85
VCAM1-205ENST00000603679 NUDT7P0C024 238 aa3.48□□□□□ -1.85
VCAM1-205ENST00000603679 TSPY3P0CV98 308 aa3.48□□□□□ -1.85
VCAM1-205ENST00000603679 TSPY8P0CW00 308 aa3.48□□□□□ -1.85
VCAM1-205ENST00000603679 PCSK2P16519 638 aa3.48□□□□□ -1.85
VCAM1-205ENST00000603679 TSPY1Q01534 308 aa3.48□□□□□ -1.85
VCAM1-205ENST00000603679 EXOSC10Q01780 885 aaKnown RBP3.48□□□□□ -1.85
VCAM1-205ENST00000603679 SLC9C1Q4G0N8 1177 aa3.48□□□□□ -1.85
VCAM1-205ENST00000603679 MSS51Q4VC12 460 aa3.48□□□□□ -1.85
VCAM1-205ENST00000603679 DEPDC7Q96QD5 511 aa3.48□□□□□ -1.85
VCAM1-205ENST00000603679 PURBQ96QR8 312 aaKnown RBP3.48□□□□□ -1.85
VCAM1-205ENST00000603679 APBA2Q99767 749 aa3.48□□□□□ -1.85
VCAM1-205ENST00000603679 SENP7Q9BQF6 1050 aa3.48□□□□□ -1.85
VCAM1-205ENST00000603679 HOMER2Q9NSB8 354 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms