RNA–Protein interactions for RNA: ENST00000602841.5

SCNM1-207, Transcript of sodium channel modifier 1, humanhuman

TSL 3

Gene SCNM1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-207ENST00000602841 PRRT2Q7Z6L0 340 aaPredicted RBP12.4□□□□□ -0.42
SCNM1-207ENST00000602841 HOMER1Q86YM7 354 aa12.4□□□□□ -0.42
SCNM1-207ENST00000602841 MS4A4AQ96JQ5 239 aa12.4□□□□□ -0.42
SCNM1-207ENST00000602841 FTOQ9C0B1 505 aaKnown RBP eCLIP12.4□□□□□ -0.42
SCNM1-207ENST00000602841 FOXP1Q9H334 677 aaPredicted RBP12.4□□□□□ -0.42
SCNM1-207ENST00000602841 SH2D4AQ9H788 454 aa12.4□□□□□ -0.42
SCNM1-207ENST00000602841 LMBRD1Q9NUN5 540 aa12.4□□□□□ -0.42
SCNM1-207ENST00000602841 PCDHA6Q9UN73 950 aa12.4□□□□□ -0.42
SCNM1-207ENST00000602841 STXBP5LQ9Y2K9 1186 aa12.4□□□□□ -0.42
SCNM1-207ENST00000602841 KIF3AQ9Y496 699 aa12.4□□□□□ -0.42
SCNM1-207ENST00000602841 PCDHA8Q9Y5H6 950 aa12.4□□□□□ -0.42
SCNM1-207ENST00000602841 BAZ2BQ9UIF8 2168 aaKnown RBP12.4□□□□□ -0.42
SCNM1-207ENST00000602841 H3BQV1 296 aa12.39□□□□□ -0.43
SCNM1-207ENST00000602841 hCG_1984214I3L0E3 225 aa12.39□□□□□ -0.43
SCNM1-207ENST00000602841 DSG3P32926 999 aa12.39□□□□□ -0.43
SCNM1-207ENST00000602841 NF2P35240 595 aa12.39□□□□□ -0.43
SCNM1-207ENST00000602841 STAT2P52630 851 aa12.39□□□□□ -0.43
SCNM1-207ENST00000602841 PPIL2Q13356 520 aa12.39□□□□□ -0.43
SCNM1-207ENST00000602841 TREML2Q5T2D2 321 aa12.39□□□□□ -0.43
SCNM1-207ENST00000602841 MYSM1Q5VVJ2 828 aa12.39□□□□□ -0.43
SCNM1-207ENST00000602841 FAM160B2Q86V87 743 aa12.39□□□□□ -0.43
SCNM1-207ENST00000602841 ZNF713Q8N859 430 aaPredicted RBP12.39□□□□□ -0.43
SCNM1-207ENST00000602841 TMEM87AQ8NBN3 555 aa12.39□□□□□ -0.43
SCNM1-207ENST00000602841 CD99L2Q8TCZ2 262 aa12.39□□□□□ -0.43
SCNM1-207ENST00000602841 DPF3Q92784 378 aa12.39□□□□□ -0.43
SCNM1-207ENST00000602841 USP28Q96RU2 1077 aa12.39□□□□□ -0.43
SCNM1-207ENST00000602841 RPAP3Q9H6T3 665 aaPredicted RBP12.39□□□□□ -0.43
SCNM1-207ENST00000602841 TFIP11Q9UBB9 837 aaKnown RBP12.39□□□□□ -0.43
SCNM1-207ENST00000602841 PPP1R9AQ9ULJ8 1098 aa12.39□□□□□ -0.43
SCNM1-207ENST00000602841 CNPY2Q9Y2B0 182 aa12.39□□□□□ -0.43
SCNM1-207ENST00000602841 HOXA7P31268 230 aaPredicted RBP12.38□□□□□ -0.43
SCNM1-207ENST00000602841 AKAP17AQ02040 695 aaKnown RBP12.38□□□□□ -0.43
SCNM1-207ENST00000602841 PTPAQ15257 358 aa12.38□□□□□ -0.43
SCNM1-207ENST00000602841 FOXD4L6Q3SYB3 417 aaPredicted RBP12.38□□□□□ -0.43
SCNM1-207ENST00000602841 FOXD4L3Q6VB84 417 aaPredicted RBP12.38□□□□□ -0.43
SCNM1-207ENST00000602841 NOSTRINQ8IVI9 506 aa12.38□□□□□ -0.43
SCNM1-207ENST00000602841 BLIDQ8IZY5 108 aa12.38□□□□□ -0.43
SCNM1-207ENST00000602841 CHURC1Q8WUH1 139 aa12.38□□□□□ -0.43
SCNM1-207ENST00000602841 TBC1D5Q92609 795 aa12.38□□□□□ -0.43
SCNM1-207ENST00000602841 OPTNQ96CV9 577 aa12.38□□□□□ -0.43
SCNM1-207ENST00000602841 EFCC1Q9HA90 598 aa12.38□□□□□ -0.43
SCNM1-207ENST00000602841 SLC38A10Q9HBR0 1119 aa12.38□□□□□ -0.43
SCNM1-207ENST00000602841 RCOR1Q9UKL0 485 aa12.38□□□□□ -0.43
SCNM1-207ENST00000602841 PCDHA4Q9UN74 947 aa12.38□□□□□ -0.43
SCNM1-207ENST00000602841 CSADQ9Y600 493 aa12.38□□□□□ -0.43
SCNM1-207ENST00000602841 A0A1W2PPC1 479 aa12.37□□□□□ -0.43
SCNM1-207ENST00000602841 SMCO2A6NFE2 343 aa12.37□□□□□ -0.43
SCNM1-207ENST00000602841 VWA5AO00534 786 aa12.37□□□□□ -0.43
SCNM1-207ENST00000602841 MEIS2O14770 477 aa12.37□□□□□ -0.43
SCNM1-207ENST00000602841 RAD21O60216 631 aa12.37□□□□□ -0.43
SCNM1-207ENST00000602841 ALDH1A1P00352 501 aa12.37□□□□□ -0.43
SCNM1-207ENST00000602841 NASPP49321 788 aaPredicted RBP12.37□□□□□ -0.43
SCNM1-207ENST00000602841 GHRHRQ02643 423 aa12.37□□□□□ -0.43
SCNM1-207ENST00000602841 HEATR3Q7Z4Q2 680 aa12.37□□□□□ -0.43
SCNM1-207ENST00000602841 BRAPQ7Z569 592 aa12.37□□□□□ -0.43
SCNM1-207ENST00000602841 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.37□□□□□ -0.43
SCNM1-207ENST00000602841 PRPF38AQ8NAV1 312 aaKnown RBP12.37□□□□□ -0.43
SCNM1-207ENST00000602841 RASGRP4Q8TDF6 673 aa12.37□□□□□ -0.43
SCNM1-207ENST00000602841 CLEC4DQ8WXI8 215 aa12.37□□□□□ -0.43
SCNM1-207ENST00000602841 KIFC2Q96AC6 838 aa12.37□□□□□ -0.43
SCNM1-207ENST00000602841 ATG4CQ96DT6 458 aa12.37□□□□□ -0.43
SCNM1-207ENST00000602841 ERO1AQ96HE7 468 aa12.37□□□□□ -0.43
SCNM1-207ENST00000602841 SLF1Q9BQI6 1058 aa12.37□□□□□ -0.43
SCNM1-207ENST00000602841 GDPD2Q9HCC8 539 aa12.37□□□□□ -0.43
SCNM1-207ENST00000602841 CLIC4Q9Y696 253 aa12.37□□□□□ -0.43
SCNM1-207ENST00000602841 PARP14Q460N5 1801 aa12.37□□□□□ -0.43
SCNM1-207ENST00000602841 LOC285556D6RIA3 1793 aa12.36□□□□□ -0.43
SCNM1-207ENST00000602841 SPDYE16A6NNV3 312 aaPredicted RBP12.36□□□□□ -0.43
SCNM1-207ENST00000602841 GADD45BO75293 160 aaPredicted RBP12.36□□□□□ -0.43
SCNM1-207ENST00000602841 CNMDO75829 334 aa12.36□□□□□ -0.43
SCNM1-207ENST00000602841 MYCP01106 439 aaPredicted RBP12.36□□□□□ -0.43
SCNM1-207ENST00000602841 NLRP5P59047 1200 aa12.36□□□□□ -0.43
SCNM1-207ENST00000602841 NBR1Q14596 966 aa12.36□□□□□ -0.43
SCNM1-207ENST00000602841 MCTP1Q6DN14 999 aa12.36□□□□□ -0.43
SCNM1-207ENST00000602841 GALNT17Q6IS24 598 aa12.36□□□□□ -0.43
SCNM1-207ENST00000602841 PPP1R18Q6NYC8 613 aa12.36□□□□□ -0.43
SCNM1-207ENST00000602841 Q7L0L9 218 aa12.36□□□□□ -0.43
SCNM1-207ENST00000602841 FBXO11Q86XK2 927 aa12.36□□□□□ -0.43
SCNM1-207ENST00000602841 DEFB123Q8N688 67 aa12.36□□□□□ -0.43
SCNM1-207ENST00000602841 C4orf32Q8N8J7 132 aa12.36□□□□□ -0.43
SCNM1-207ENST00000602841 LINC00301Q8NCQ3 95 aa12.36□□□□□ -0.43
SCNM1-207ENST00000602841 PROCA1Q8NCQ7 364 aaPredicted RBP12.36□□□□□ -0.43
SCNM1-207ENST00000602841 CRYGNQ8WXF5 182 aa12.36□□□□□ -0.43
SCNM1-207ENST00000602841 PGBD1Q96JS3 809 aa12.36□□□□□ -0.43
SCNM1-207ENST00000602841 AGBL1Q96MI9 1066 aa12.36□□□□□ -0.43
SCNM1-207ENST00000602841 FEZ1Q99689 392 aa12.36□□□□□ -0.43
SCNM1-207ENST00000602841 RIC8AQ9NPQ8 531 aa12.36□□□□□ -0.43
SCNM1-207ENST00000602841 TMEM260Q9NX78 707 aa12.36□□□□□ -0.43
SCNM1-207ENST00000602841 RTEL1Q9NZ71 1219 aa12.36□□□□□ -0.43
SCNM1-207ENST00000602841 ZNF214Q9UL59 606 aaPredicted RBP12.36□□□□□ -0.43
SCNM1-207ENST00000602841 PCDHA1Q9Y5I3 950 aa12.36□□□□□ -0.43
SCNM1-207ENST00000602841 PTPRFP10586 1907 aa12.36□□□□□ -0.43
SCNM1-207ENST00000602841 TESPA1A2RU30 521 aaPredicted RBP12.35□□□□□ -0.43
SCNM1-207ENST00000602841 USP17L15C9J2P7 530 aa12.35□□□□□ -0.43
SCNM1-207ENST00000602841 USP17L13C9JLJ4 530 aa12.35□□□□□ -0.43
SCNM1-207ENST00000602841 USP17L11C9JVI0 530 aa12.35□□□□□ -0.43
SCNM1-207ENST00000602841 USP17L18D6R9N7 530 aa12.35□□□□□ -0.43
SCNM1-207ENST00000602841 USP17L22D6RA61 530 aa12.35□□□□□ -0.43
SCNM1-207ENST00000602841 USP17L17D6RBQ6 530 aa12.35□□□□□ -0.43
SCNM1-207ENST00000602841 USP17L19D6RCP7 530 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms