RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 FANCBQ8NB91 859 aa17.13■□□□□ 0.33
PPFIA3-206ENST00000602655 OXER1Q8TDS5 423 aa17.13■□□□□ 0.33
PPFIA3-206ENST00000602655 FAXDC2Q96IV6 333 aa17.13■□□□□ 0.33
PPFIA3-206ENST00000602655 BCS1LQ9Y276 419 aa17.13■□□□□ 0.33
PPFIA3-206ENST00000602655 CCNHP51946 323 aaPredicted RBP17.13■□□□□ 0.33
PPFIA3-206ENST00000602655 IFT88Q13099 833 aa17.13■□□□□ 0.33
PPFIA3-206ENST00000602655 CRACR2BQ8N4Y2 399 aaPredicted RBP17.13■□□□□ 0.33
PPFIA3-206ENST00000602655 CERS5Q8N5B7 392 aa17.13■□□□□ 0.33
PPFIA3-206ENST00000602655 CNNM2Q9H8M5 875 aa17.13■□□□□ 0.33
PPFIA3-206ENST00000602655 KIF9Q9HAQ2 790 aa17.13■□□□□ 0.33
PPFIA3-206ENST00000602655 CABP5Q9NP86 173 aa17.13■□□□□ 0.33
PPFIA3-206ENST00000602655 RAB21Q9UL25 225 aa17.13■□□□□ 0.33
PPFIA3-206ENST00000602655 MYO5AQ9Y4I1 1855 aaKnown RBP17.13■□□□□ 0.33
PPFIA3-206ENST00000602655 NPR1P16066 1061 aa17.13■□□□□ 0.33
PPFIA3-206ENST00000602655 IRX1P78414 480 aaPredicted RBP17.13■□□□□ 0.33
PPFIA3-206ENST00000602655 IKQ13123 557 aaPredicted RBP17.13■□□□□ 0.33
PPFIA3-206ENST00000602655 NCAPHQ15003 741 aa17.13■□□□□ 0.33
PPFIA3-206ENST00000602655 ZYXQ15942 572 aaKnown RBP17.13■□□□□ 0.33
PPFIA3-206ENST00000602655 KCTD16Q68DU8 428 aa17.13■□□□□ 0.33
PPFIA3-206ENST00000602655 AKT1S1Q96B36 256 aa17.13■□□□□ 0.33
PPFIA3-206ENST00000602655 MASTLQ96GX5 879 aa17.13■□□□□ 0.33
PPFIA3-206ENST00000602655 NAPGQ99747 312 aaPredicted RBP17.13■□□□□ 0.33
PPFIA3-206ENST00000602655 FRMPD2Q68DX3 1309 aaPredicted RBP17.13■□□□□ 0.33
PPFIA3-206ENST00000602655 ALDH1B1P30837 517 aa17.12■□□□□ 0.33
PPFIA3-206ENST00000602655 PPFIA1Q13136 1202 aa17.12■□□□□ 0.33
PPFIA3-206ENST00000602655 ZFPM1Q8IX07 1006 aa17.12■□□□□ 0.33
PPFIA3-206ENST00000602655 LARGE2Q8N3Y3 721 aa17.12■□□□□ 0.33
PPFIA3-206ENST00000602655 ARMC2Q8NEN0 867 aa17.12■□□□□ 0.33
PPFIA3-206ENST00000602655 KIF3CO14782 793 aa17.12■□□□□ 0.33
PPFIA3-206ENST00000602655 PLSCR1O15162 318 aa17.12■□□□□ 0.33
PPFIA3-206ENST00000602655 ERCC3P19447 782 aa17.12■□□□□ 0.33
PPFIA3-206ENST00000602655 CCDC40Q4G0X9 1142 aa17.12■□□□□ 0.33
PPFIA3-206ENST00000602655 MICALCLQ6ZW33 695 aa17.12■□□□□ 0.33
PPFIA3-206ENST00000602655 TRMT44Q8IYL2 757 aaKnown RBP17.12■□□□□ 0.33
PPFIA3-206ENST00000602655 STAG2Q8N3U4 1231 aa17.12■□□□□ 0.33
PPFIA3-206ENST00000602655 TBC1D31Q96DN5 1066 aa17.12■□□□□ 0.33
PPFIA3-206ENST00000602655 SPDL1Q96EA4 605 aa17.12■□□□□ 0.33
PPFIA3-206ENST00000602655 IL17RAQ96F46 866 aa17.12■□□□□ 0.33
PPFIA3-206ENST00000602655 SH3BP1Q9Y3L3 701 aa17.12■□□□□ 0.33
PPFIA3-206ENST00000602655 TCP10L2B9ZVM9 353 aa17.12■□□□□ 0.33
PPFIA3-206ENST00000602655 ENC1O14682 589 aa17.12■□□□□ 0.33
PPFIA3-206ENST00000602655 SPECC1LQ69YQ0 1117 aa17.12■□□□□ 0.33
PPFIA3-206ENST00000602655 MSANTD4Q8NCY6 345 aa17.12■□□□□ 0.33
PPFIA3-206ENST00000602655 TBC1D22AQ8WUA7 517 aa17.12■□□□□ 0.33
PPFIA3-206ENST00000602655 TDRD3Q9H7E2 651 aaKnown RBP17.12■□□□□ 0.33
PPFIA3-206ENST00000602655 ATP6V0A2Q9Y487 856 aa17.12■□□□□ 0.33
PPFIA3-206ENST00000602655 GOLGA6L7A0A1B0GV03 622 aa17.11■□□□□ 0.33
PPFIA3-206ENST00000602655 SPTLC2O15270 562 aa17.11■□□□□ 0.33
PPFIA3-206ENST00000602655 LDHCP07864 332 aa17.11■□□□□ 0.33
PPFIA3-206ENST00000602655 SYKP43405 635 aa17.11■□□□□ 0.33
PPFIA3-206ENST00000602655 NAP1L1P55209 391 aaKnown RBP17.11■□□□□ 0.33
PPFIA3-206ENST00000602655 PNOCQ13519 176 aa17.11■□□□□ 0.33
PPFIA3-206ENST00000602655 ADALQ6DHV7 355 aa17.11■□□□□ 0.33
PPFIA3-206ENST00000602655 USP17L2Q6R6M4 530 aa17.11■□□□□ 0.33
PPFIA3-206ENST00000602655 GPCPD1Q9NPB8 672 aa17.11■□□□□ 0.33
PPFIA3-206ENST00000602655 GUCA1BQ9UMX6 200 aa17.11■□□□□ 0.33
PPFIA3-206ENST00000602655 SAFBQ15424 915 aaKnown RBP eCLIP17.11■□□□□ 0.33
PPFIA3-206ENST00000602655 DIS3L2Q8IYB7 885 aaKnown RBP17.11■□□□□ 0.33
PPFIA3-206ENST00000602655 STAG1Q8WVM7 1258 aa17.11■□□□□ 0.33
PPFIA3-206ENST00000602655 MCM8Q9UJA3 840 aa17.11■□□□□ 0.33
PPFIA3-206ENST00000602655 PAPPAQ13219 1627 aa17.11■□□□□ 0.33
PPFIA3-206ENST00000602655 CAND2O75155 1236 aa17.11■□□□□ 0.33
PPFIA3-206ENST00000602655 AP1G2O75843 785 aa17.11■□□□□ 0.33
PPFIA3-206ENST00000602655 ARHGAP25P42331 645 aa17.11■□□□□ 0.33
PPFIA3-206ENST00000602655 ZKSCAN8Q15776 578 aaPredicted RBP17.11■□□□□ 0.33
PPFIA3-206ENST00000602655 ZBTB10Q96DT7 871 aa17.11■□□□□ 0.33
PPFIA3-206ENST00000602655 TMEM87BQ96K49 555 aa17.11■□□□□ 0.33
PPFIA3-206ENST00000602655 MATR3P43243 847 aaKnown RBP eCLIP17.1■□□□□ 0.33
PPFIA3-206ENST00000602655 SNAP25P60880 206 aa17.1■□□□□ 0.33
PPFIA3-206ENST00000602655 MRPS25P82663 173 aaKnown RBP17.1■□□□□ 0.33
PPFIA3-206ENST00000602655 KLHL10Q6JEL2 608 aa17.1■□□□□ 0.33
PPFIA3-206ENST00000602655 SND1Q7KZF4 910 aaKnown RBP eCLIP17.1■□□□□ 0.33
PPFIA3-206ENST00000602655 PLCD4Q9BRC7 762 aa17.1■□□□□ 0.33
PPFIA3-206ENST00000602655 HPCAL4Q9UM19 191 aa17.1■□□□□ 0.33
PPFIA3-206ENST00000602655 PDHBP11177 359 aa17.1■□□□□ 0.33
PPFIA3-206ENST00000602655 DPEP1P16444 411 aa17.1■□□□□ 0.33
PPFIA3-206ENST00000602655 ARMC3Q5W041 872 aa17.1■□□□□ 0.33
PPFIA3-206ENST00000602655 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.1■□□□□ 0.33
PPFIA3-206ENST00000602655 DAGLAQ9Y4D2 1042 aa17.1■□□□□ 0.33
PPFIA3-206ENST00000602655 GDF11O95390 407 aa17.09■□□□□ 0.33
PPFIA3-206ENST00000602655 SNCBQ16143 134 aa17.09■□□□□ 0.33
PPFIA3-206ENST00000602655 HEATR3Q7Z4Q2 680 aa17.09■□□□□ 0.33
PPFIA3-206ENST00000602655 CCDC84Q86UT8 332 aaPredicted RBP17.09■□□□□ 0.33
PPFIA3-206ENST00000602655 STAMQ92783 540 aa17.09■□□□□ 0.33
PPFIA3-206ENST00000602655 PLIN2Q99541 437 aa17.09■□□□□ 0.33
PPFIA3-206ENST00000602655 AKR1B15C9JRZ8 316 aaPredicted RBP17.09■□□□□ 0.33
PPFIA3-206ENST00000602655 MEFVO15553 781 aaPredicted RBP17.09■□□□□ 0.33
PPFIA3-206ENST00000602655 TUBBP07437 444 aa17.09■□□□□ 0.33
PPFIA3-206ENST00000602655 CRY2Q49AN0 593 aa17.09■□□□□ 0.33
PPFIA3-206ENST00000602655 MICAL1Q8TDZ2 1067 aa17.09■□□□□ 0.33
PPFIA3-206ENST00000602655 GJA3Q9Y6H8 435 aa17.09■□□□□ 0.33
PPFIA3-206ENST00000602655 SPEF2Q9C093 1822 aa17.09■□□□□ 0.33
PPFIA3-206ENST00000602655 CDC25AP30304 524 aa17.09■□□□□ 0.33
PPFIA3-206ENST00000602655 CRYMQ14894 314 aa17.09■□□□□ 0.33
PPFIA3-206ENST00000602655 TC2NQ8N9U0 490 aa17.09■□□□□ 0.33
PPFIA3-206ENST00000602655 ACRBPQ8NEB7 543 aa17.09■□□□□ 0.33
PPFIA3-206ENST00000602655 EYA3Q99504 573 aa17.09■□□□□ 0.33
PPFIA3-206ENST00000602655 NFE2L3Q9Y4A8 694 aa17.09■□□□□ 0.33
PPFIA3-206ENST00000602655 PES1O00541 588 aaKnown RBP17.08■□□□□ 0.33
PPFIA3-206ENST00000602655 EIF3HO15372 352 aaKnown RBP eCLIP17.08■□□□□ 0.336e-6■■■■□ 25.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms