RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-231ENST00000602190 LRRC47Q8N1G4 583 aaKnown RBP21.82■■□□□ 1.08
IRF3-231ENST00000602190 VTI1AQ96AJ9 217 aa21.82■■□□□ 1.08
IRF3-231ENST00000602190 UHRF1Q96T88 793 aaPredicted RBP21.82■■□□□ 1.08
IRF3-231ENST00000602190 LRRCC1Q9C099 1032 aa21.82■■□□□ 1.08
IRF3-231ENST00000602190 SLC28A3Q9HAS3 691 aa21.82■■□□□ 1.08
IRF3-231ENST00000602190 ZNF287Q9HBT7 754 aa21.82■■□□□ 1.08
IRF3-231ENST00000602190 ECHDC1Q9NTX5 307 aa21.82■■□□□ 1.08
IRF3-231ENST00000602190 COG6Q9Y2V7 657 aa21.82■■□□□ 1.08
IRF3-231ENST00000602190 SCN5AQ14524 2016 aa21.82■■□□□ 1.08
IRF3-231ENST00000602190 TCF20Q9UGU0 1960 aaKnown RBP21.81■■□□□ 1.08
IRF3-231ENST00000602190 MINDY4BA8MYZ0 360 aa21.81■■□□□ 1.08
IRF3-231ENST00000602190 GNAT2P19087 354 aa21.81■■□□□ 1.08
IRF3-231ENST00000602190 STAT2P52630 851 aa21.81■■□□□ 1.08
IRF3-231ENST00000602190 SLFN13Q68D06 897 aa21.81■■□□□ 1.08
IRF3-231ENST00000602190 FAM160B2Q86V87 743 aa21.81■■□□□ 1.08
IRF3-231ENST00000602190 PPM1EQ8WY54 764 aa21.81■■□□□ 1.08
IRF3-231ENST00000602190 RNF146Q9NTX7 359 aa21.81■■□□□ 1.08
IRF3-231ENST00000602190 PCDHA11Q9Y5I1 949 aa21.81■■□□□ 1.08
IRF3-231ENST00000602190 PRDM1O75626 825 aa21.8■■□□□ 1.08
IRF3-231ENST00000602190 PTGS1P23219 599 aa21.8■■□□□ 1.08
IRF3-231ENST00000602190 NOVP48745 357 aa21.8■■□□□ 1.08
IRF3-231ENST00000602190 IQSEC1Q6DN90 963 aa21.8■■□□□ 1.08
IRF3-231ENST00000602190 OTOP2Q7RTS6 562 aa21.8■■□□□ 1.08
IRF3-231ENST00000602190 RAPGEFL1Q9UHV5 662 aa21.8■■□□□ 1.08
IRF3-231ENST00000602190 RNF113AO15541 343 aaKnown RBP21.79■■□□□ 1.08
IRF3-231ENST00000602190 ZFYP08048 801 aaPredicted RBP21.79■■□□□ 1.08
IRF3-231ENST00000602190 ZNF444Q8N0Y2 327 aaPredicted RBP21.79■■□□□ 1.08
IRF3-231ENST00000602190 STAG1Q8WVM7 1258 aa21.79■■□□□ 1.08
IRF3-231ENST00000602190 TRPV6Q9H1D0 765 aa21.79■■□□□ 1.08
IRF3-231ENST00000602190 PDGFCQ9NRA1 345 aa21.79■■□□□ 1.08
IRF3-231ENST00000602190 CYP39A1Q9NYL5 469 aa21.79■■□□□ 1.08
IRF3-231ENST00000602190 CTDP1Q9Y5B0 961 aaPredicted RBP21.79■■□□□ 1.08
IRF3-231ENST00000602190 TMEM232C9JQI7 657 aa21.78■■□□□ 1.08
IRF3-231ENST00000602190 M0R2C6 588 aa21.78■■□□□ 1.08
IRF3-231ENST00000602190 PFKMP08237 780 aa21.78■■□□□ 1.08
IRF3-231ENST00000602190 PLA2G5P39877 138 aa21.78■■□□□ 1.08
IRF3-231ENST00000602190 SLC4A3P48751 1232 aa21.78■■□□□ 1.08
IRF3-231ENST00000602190 TMEM63BQ5T3F8 832 aa21.78■■□□□ 1.08
IRF3-231ENST00000602190 RPUSD2Q8IZ73 545 aaKnown RBP21.78■■□□□ 1.08
IRF3-231ENST00000602190 IFNL3Q8IZI9 196 aa21.78■■□□□ 1.08
IRF3-231ENST00000602190 STK11IPQ8N1F8 1099 aa21.78■■□□□ 1.08
IRF3-231ENST00000602190 CHURC1Q8WUH1 139 aa21.78■■□□□ 1.08
IRF3-231ENST00000602190 ALDH8A1Q9H2A2 487 aaPredicted RBP21.78■■□□□ 1.08
IRF3-231ENST00000602190 CHMP4BQ9H444 224 aaKnown RBP21.78■■□□□ 1.08
IRF3-231ENST00000602190 VTA1Q9NP79 307 aa21.78■■□□□ 1.08
IRF3-231ENST00000602190 HOMER2Q9NSB8 354 aa21.78■■□□□ 1.08
IRF3-231ENST00000602190 PTPRSQ13332 1948 aa21.78■■□□□ 1.08
IRF3-231ENST00000602190 LOC102724159A0A0B4J2E5 919 aa21.77■■□□□ 1.08
IRF3-231ENST00000602190 PATL2C9JE40 543 aaKnown RBP21.77■■□□□ 1.08
IRF3-231ENST00000602190 CCL23P55773 120 aa21.77■■□□□ 1.08
IRF3-231ENST00000602190 PWP2Q15269 919 aaKnown RBP21.77■■□□□ 1.08
IRF3-231ENST00000602190 CCDC85BQ15834 202 aaPredicted RBP21.77■■□□□ 1.08
IRF3-231ENST00000602190 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.77■■□□□ 1.08
IRF3-231ENST00000602190 SLC4A7Q9Y6M7 1214 aa21.77■■□□□ 1.08
IRF3-231ENST00000602190 DDX49Q9Y6V7 483 aaKnown RBP21.77■■□□□ 1.08
IRF3-231ENST00000602190 TET1Q8NFU7 2136 aa21.76■■□□□ 1.07
IRF3-231ENST00000602190 RBM47A0AV96 593 aaKnown RBP21.76■■□□□ 1.07
IRF3-231ENST00000602190 ERC2O15083 957 aa21.76■■□□□ 1.07
IRF3-231ENST00000602190 DYNC1LI2O43237 492 aaPredicted RBP21.76■■□□□ 1.07
IRF3-231ENST00000602190 SMARCA5O60264 1052 aaPredicted RBP21.76■■□□□ 1.07
IRF3-231ENST00000602190 ZEB2O60315 1214 aa21.76■■□□□ 1.07
IRF3-231ENST00000602190 MYOGP15173 224 aa21.76■■□□□ 1.07
IRF3-231ENST00000602190 IGFBP4P22692 258 aa21.76■■□□□ 1.07
IRF3-231ENST00000602190 RABGGTBP53611 331 aa21.76■■□□□ 1.07
IRF3-231ENST00000602190 DUSP28Q4G0W2 176 aa21.76■■□□□ 1.07
IRF3-231ENST00000602190 MUM1L1Q5H9M0 696 aa21.76■■□□□ 1.07
IRF3-231ENST00000602190 PPP2R2DQ66LE6 453 aa21.76■■□□□ 1.07
IRF3-231ENST00000602190 TRERF1Q96PN7 1200 aa21.76■■□□□ 1.07
IRF3-231ENST00000602190 AP5M1Q9H0R1 490 aa21.76■■□□□ 1.07
IRF3-231ENST00000602190 FOXP2O15409 715 aa21.75■■□□□ 1.07
IRF3-231ENST00000602190 TDO2P48775 406 aa21.75■■□□□ 1.07
IRF3-231ENST00000602190 PSMC6P62333 389 aa21.75■■□□□ 1.07
IRF3-231ENST00000602190 FBXO16Q8IX29 292 aaPredicted RBP21.75■■□□□ 1.07
IRF3-231ENST00000602190 TSPY3P0CV98 308 aa21.74■■□□□ 1.07
IRF3-231ENST00000602190 TSPY8P0CW00 308 aa21.74■■□□□ 1.07
IRF3-231ENST00000602190 SLC1A4P43007 532 aa21.74■■□□□ 1.07
IRF3-231ENST00000602190 TTLL4Q14679 1199 aa21.74■■□□□ 1.07
IRF3-231ENST00000602190 RCSD1Q6JBY9 416 aa21.74■■□□□ 1.07
IRF3-231ENST00000602190 SCLYQ96I15 445 aa21.74■■□□□ 1.07
IRF3-231ENST00000602190 IL17RBQ9NRM6 502 aa21.74■■□□□ 1.07
IRF3-231ENST00000602190 PRR12Q9ULL5 1215 aa21.74■■□□□ 1.07
IRF3-231ENST00000602190 ARIH1Q9Y4X5 557 aaPredicted RBP21.74■■□□□ 1.07
IRF3-231ENST00000602190 MTCH2Q9Y6C9 303 aa21.74■■□□□ 1.07
IRF3-231ENST00000602190 ATP2A2P16615 1042 aaKnown RBP21.73■■□□□ 1.07
IRF3-231ENST00000602190 PURAQ00577 322 aaKnown RBP21.73■■□□□ 1.07
IRF3-231ENST00000602190 TFAP4Q01664 338 aa21.73■■□□□ 1.07
IRF3-231ENST00000602190 PDE4BQ07343 736 aa21.73■■□□□ 1.07
IRF3-231ENST00000602190 DCTPP1Q9H773 170 aa21.73■■□□□ 1.07
IRF3-231ENST00000602190 COL4A4P53420 1690 aaPredicted RBP21.72■■□□□ 1.07
IRF3-231ENST00000602190 BRWD1Q9NSI6 2320 aa21.72■■□□□ 1.07
IRF3-231ENST00000602190 ICAM1P05362 532 aa21.72■■□□□ 1.07
IRF3-231ENST00000602190 ALAS1P13196 640 aa21.72■■□□□ 1.07
IRF3-231ENST00000602190 MCCP23508 829 aa21.72■■□□□ 1.07
IRF3-231ENST00000602190 TFF2Q03403 129 aa21.72■■□□□ 1.07
IRF3-231ENST00000602190 PPARAQ07869 468 aa21.72■■□□□ 1.07
IRF3-231ENST00000602190 PPP4R3BQ5MIZ7 849 aa21.72■■□□□ 1.07
IRF3-231ENST00000602190 BTNL9Q6UXG8 535 aa21.72■■□□□ 1.07
IRF3-231ENST00000602190 NOL8Q76FK4 1167 aaKnown RBP21.72■■□□□ 1.07
IRF3-231ENST00000602190 NECAB3Q96P71 396 aaPredicted RBP21.72■■□□□ 1.07
IRF3-231ENST00000602190 BCL11AQ9H165 835 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms