RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 POLR2BP30876 1174 aaKnown RBP6.43□□□□□ -1.38
VRK3-222ENST00000601324 GTF2F1P35269 517 aaKnown RBP eCLIP6.43□□□□□ -1.38
VRK3-222ENST00000601324 CYP27A1Q02318 531 aa6.43□□□□□ -1.38
VRK3-222ENST00000601324 ZNF746Q6NUN9 644 aaPredicted RBP6.43□□□□□ -1.38
VRK3-222ENST00000601324 PTF1AQ7RTS3 328 aa6.43□□□□□ -1.38
VRK3-222ENST00000601324 SHISA5Q8N114 240 aa6.43□□□□□ -1.38
VRK3-222ENST00000601324 FBXL6Q8N531 539 aa6.43□□□□□ -1.38
VRK3-222ENST00000601324 BAHD1Q8TBE0 780 aaPredicted RBP6.43□□□□□ -1.38
VRK3-222ENST00000601324 UBXN4Q92575 508 aa6.43□□□□□ -1.38
VRK3-222ENST00000601324 DHX38Q92620 1227 aaKnown RBP6.43□□□□□ -1.38
VRK3-222ENST00000601324 SLC9A7Q96T83 725 aa6.43□□□□□ -1.38
VRK3-222ENST00000601324 SLC12A7Q9Y666 1083 aa6.43□□□□□ -1.38
VRK3-222ENST00000601324 RGPD8O14715 1765 aaPredicted RBP6.43□□□□□ -1.38
VRK3-222ENST00000601324 PPLO60437 1756 aa6.43□□□□□ -1.38
VRK3-222ENST00000601324 FAM170BA6NMN3 283 aa6.42□□□□□ -1.38
VRK3-222ENST00000601324 UBOX5O94941 541 aa6.42□□□□□ -1.38
VRK3-222ENST00000601324 ZBTB7AO95365 584 aa6.42□□□□□ -1.38
VRK3-222ENST00000601324 GBP1P32455 592 aa6.42□□□□□ -1.38
VRK3-222ENST00000601324 ETV3P41162 512 aa6.42□□□□□ -1.38
VRK3-222ENST00000601324 CPSF6Q16630 551 aaKnown RBP eCLIP6.42□□□□□ -1.38
VRK3-222ENST00000601324 CYP27C1Q4G0S4 372 aa6.42□□□□□ -1.38
VRK3-222ENST00000601324 DUSP27Q5VZP5 1158 aa6.42□□□□□ -1.38
VRK3-222ENST00000601324 ZNF765Q7L2R6 523 aa6.42□□□□□ -1.38
VRK3-222ENST00000601324 TTC6Q86TZ1 520 aa6.42□□□□□ -1.38
VRK3-222ENST00000601324 CDH24Q86UP0 819 aa6.42□□□□□ -1.38
VRK3-222ENST00000601324 RIN3Q8TB24 985 aa6.42□□□□□ -1.38
VRK3-222ENST00000601324 SHKBP1Q8TBC3 707 aa6.42□□□□□ -1.38
VRK3-222ENST00000601324 METTL22Q9BUU2 404 aaPredicted RBP6.42□□□□□ -1.38
VRK3-222ENST00000601324 HIRIP3Q9BW71 556 aaPredicted RBP6.42□□□□□ -1.38
VRK3-222ENST00000601324 ATG3Q9NT62 314 aa6.42□□□□□ -1.38
VRK3-222ENST00000601324 BCL9O00512 1426 aa6.42□□□□□ -1.38
VRK3-222ENST00000601324 DLC1Q96QB1 1528 aa6.41□□□□□ -1.38
VRK3-222ENST00000601324 A0A1W2PQH9 124 aa6.41□□□□□ -1.38
VRK3-222ENST00000601324 WDR64B1ANS9 1081 aa6.41□□□□□ -1.38
VRK3-222ENST00000601324 FURINP09958 794 aa6.41□□□□□ -1.38
VRK3-222ENST00000601324 RBL2Q08999 1139 aa6.41□□□□□ -1.38
VRK3-222ENST00000601324 UNC5AQ6ZN44 842 aa6.41□□□□□ -1.38
VRK3-222ENST00000601324 ANKS3Q6ZW76 656 aa6.41□□□□□ -1.38
VRK3-222ENST00000601324 FAM214BQ7L5A3 538 aa6.41□□□□□ -1.38
VRK3-222ENST00000601324 CKAP2LQ8IYA6 745 aa6.41□□□□□ -1.38
VRK3-222ENST00000601324 OSBPL1AQ9BXW6 950 aa6.41□□□□□ -1.38
VRK3-222ENST00000601324 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.41□□□□□ -1.38
VRK3-222ENST00000601324 PRDM5Q9NQX1 630 aaPredicted RBP6.41□□□□□ -1.38
VRK3-222ENST00000601324 ACTR10Q9NZ32 417 aa6.41□□□□□ -1.38
VRK3-222ENST00000601324 USP35Q9P2H5 1018 aa6.41□□□□□ -1.38
VRK3-222ENST00000601324 TPX2Q9ULW0 747 aaKnown RBP6.41□□□□□ -1.38
VRK3-222ENST00000601324 MAPK8IP1Q9UQF2 711 aa6.41□□□□□ -1.38
VRK3-222ENST00000601324 SSH2Q76I76 1423 aa6.41□□□□□ -1.38
VRK3-222ENST00000601324 ANKARQ7Z5J8 1434 aa6.41□□□□□ -1.38
VRK3-222ENST00000601324 CYP7A1P22680 504 aa6.4□□□□□ -1.38
VRK3-222ENST00000601324 ZYXQ15942 572 aaKnown RBP6.4□□□□□ -1.38
VRK3-222ENST00000601324 PPP2R5EQ16537 467 aa6.4□□□□□ -1.38
VRK3-222ENST00000601324 NBPF6Q5VWK0 638 aa6.4□□□□□ -1.38
VRK3-222ENST00000601324 TMEM132EQ6IEE7 984 aa6.4□□□□□ -1.38
VRK3-222ENST00000601324 TMEM192Q8IY95 271 aa6.4□□□□□ -1.38
VRK3-222ENST00000601324 COX4I2Q96KJ9 171 aa6.4□□□□□ -1.38
VRK3-222ENST00000601324 DHRS1Q96LJ7 313 aa6.4□□□□□ -1.38
VRK3-222ENST00000601324 NBPF4Q96M43 638 aa6.4□□□□□ -1.38
VRK3-222ENST00000601324 SLC6A18Q96N87 628 aa6.4□□□□□ -1.38
VRK3-222ENST00000601324 MTFR1LQ9H019 292 aa6.4□□□□□ -1.38
VRK3-222ENST00000601324 TNKS2Q9H2K2 1166 aa6.4□□□□□ -1.38
VRK3-222ENST00000601324 GTF2IRD1Q9UHL9 959 aa6.4□□□□□ -1.38
VRK3-222ENST00000601324 AATKQ6ZMQ8 1374 aa6.4□□□□□ -1.39
VRK3-222ENST00000601324 KIAA0232Q92628 1395 aa6.4□□□□□ -1.39
VRK3-222ENST00000601324 PIK3C2GO75747 1445 aa6.4□□□□□ -1.39
VRK3-222ENST00000601324 SPATA31E1Q6ZUB1 1445 aa6.4□□□□□ -1.39
VRK3-222ENST00000601324 YTHDC2Q9H6S0 1430 aaKnown RBP6.4□□□□□ -1.39
VRK3-222ENST00000601324 LMO7Q8WWI1 1683 aa6.39□□□□□ -1.39
VRK3-222ENST00000601324 IFT172Q9UG01 1749 aa6.39□□□□□ -1.39
VRK3-222ENST00000601324 KIF1BO60333 1816 aa6.39□□□□□ -1.39
VRK3-222ENST00000601324 FAM86C2PA6NEL3 165 aa6.39□□□□□ -1.39
VRK3-222ENST00000601324 IGF2BP3O00425 579 aaKnown RBP eCLIP6.39□□□□□ -1.39
VRK3-222ENST00000601324 KLF4O43474 513 aa6.39□□□□□ -1.39
VRK3-222ENST00000601324 CLEC3AO75596 197 aa6.39□□□□□ -1.39
VRK3-222ENST00000601324 HSPA6P17066 643 aa6.39□□□□□ -1.39
VRK3-222ENST00000601324 CHMP4BP1P59074 171 aa6.39□□□□□ -1.39
VRK3-222ENST00000601324 FAM50AQ14320 339 aaKnown RBP6.39□□□□□ -1.39
VRK3-222ENST00000601324 CHRNA2Q15822 529 aa6.39□□□□□ -1.39
VRK3-222ENST00000601324 SOGA3Q5TF21 947 aa6.39□□□□□ -1.39
VRK3-222ENST00000601324 C22orf34Q6ZV56 151 aa6.39□□□□□ -1.39
VRK3-222ENST00000601324 ZDHHC13Q8IUH4 622 aa6.39□□□□□ -1.39
VRK3-222ENST00000601324 DNAJC5GQ8N7S2 189 aa6.39□□□□□ -1.39
VRK3-222ENST00000601324 RNF141Q8WVD5 230 aa6.39□□□□□ -1.39
VRK3-222ENST00000601324 HNRNPLLQ8WVV9 542 aaKnown RBP6.39□□□□□ -1.39
VRK3-222ENST00000601324 HEXIM2Q96MH2 286 aaKnown RBP6.39□□□□□ -1.39
VRK3-222ENST00000601324 KREMEN1Q96MU8 473 aa6.39□□□□□ -1.39
VRK3-222ENST00000601324 ASPNQ9BXN1 380 aa6.39□□□□□ -1.39
VRK3-222ENST00000601324 SEMA6BQ9H3T3 888 aa6.39□□□□□ -1.39
VRK3-222ENST00000601324 PHAXQ9H814 394 aaKnown RBP6.39□□□□□ -1.39
VRK3-222ENST00000601324 STK26Q9P289 416 aa6.39□□□□□ -1.39
VRK3-222ENST00000601324 R3HCC1Q9Y3T6 440 aaKnown RBP6.39□□□□□ -1.39
VRK3-222ENST00000601324 ATP7BP35670 1465 aa6.39□□□□□ -1.39
VRK3-222ENST00000601324 COL24A1Q17RW2 1714 aa6.39□□□□□ -1.39
VRK3-222ENST00000601324 PARP4Q9UKK3 1724 aaKnown RBP6.39□□□□□ -1.39
VRK3-222ENST00000601324 SBF2Q86WG5 1849 aa6.39□□□□□ -1.39
VRK3-222ENST00000601324 GOLGB1Q14789 3259 aaKnown RBP6.38□□□□□ -1.39
VRK3-222ENST00000601324 PMS1P54277 932 aaKnown RBP6.38□□□□□ -1.39
VRK3-222ENST00000601324 RNF4P78317 190 aa6.38□□□□□ -1.39
VRK3-222ENST00000601324 PRSS36Q5K4E3 855 aa6.38□□□□□ -1.39
VRK3-222ENST00000601324 SFRP5Q5T4F7 317 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms