RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-233	ENST00000600778	LAMA2	P24043	3122 aa	Known RBP	13.59	□□□□□ -0.23
SOX2-OT-233	ENST00000600778	MYADML2	A6NDP7	307 aa		13.59	□□□□□ -0.23
SOX2-OT-233	ENST00000600778	ASB14	A6NK59	587 aa		13.59	□□□□□ -0.23
SOX2-OT-233	ENST00000600778	C6orf222	P0C671	652 aa	Predicted RBP	13.59	□□□□□ -0.23
SOX2-OT-233	ENST00000600778	GOLGA8H	P0CJ92	632 aa		13.59	□□□□□ -0.23
SOX2-OT-233	ENST00000600778	SNHG28	P0DPA3	235 aa		13.59	□□□□□ -0.23
SOX2-OT-233	ENST00000600778	ACLY	P53396	1101 aa		13.59	□□□□□ -0.23
SOX2-OT-233	ENST00000600778	TLE2	Q04725	743 aa		13.59	□□□□□ -0.23
SOX2-OT-233	ENST00000600778	ZNF543	Q08ER8	600 aa		13.59	□□□□□ -0.23
SOX2-OT-233	ENST00000600778	KCNA10	Q16322	511 aa		13.59	□□□□□ -0.23
SOX2-OT-233	ENST00000600778	CCDC178	Q5BJE1	867 aa		13.59	□□□□□ -0.23
SOX2-OT-233	ENST00000600778	C1orf53	Q5VUE5	145 aa		13.59	□□□□□ -0.23
SOX2-OT-233	ENST00000600778	DGKH	Q86XP1	1220 aa		13.59	□□□□□ -0.23
SOX2-OT-233	ENST00000600778	KLHDC9	Q8NEP7	349 aa		13.59	□□□□□ -0.23
SOX2-OT-233	ENST00000600778	PURB	Q96QR8	312 aa	Known RBP	13.59	□□□□□ -0.23
SOX2-OT-233	ENST00000600778	TSEN34	Q9BSV6	310 aa	Known RBP	13.59	□□□□□ -0.23
SOX2-OT-233	ENST00000600778	KATNBL1	Q9H079	304 aa		13.59	□□□□□ -0.23
SOX2-OT-233	ENST00000600778	SPC25	Q9HBM1	224 aa		13.59	□□□□□ -0.23
SOX2-OT-233	ENST00000600778	ZSWIM5	Q9P217	1185 aa		13.59	□□□□□ -0.23
SOX2-OT-233	ENST00000600778	DDX49	Q9Y6V7	483 aa	Known RBP	13.59	□□□□□ -0.23
SOX2-OT-233	ENST00000600778	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	13.58	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	NFIB	O00712	420 aa		13.58	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	NT5C2	P49902	561 aa		13.58	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	GJA9	P57773	515 aa		13.58	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	BAAT	Q14032	418 aa	Predicted RBP	13.58	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	EEPD1	Q7L9B9	569 aa		13.58	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	SH3RF1	Q7Z6J0	888 aa		13.58	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	PNMA1	Q8ND90	353 aa		13.58	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	NUP133	Q8WUM0	1156 aa		13.58	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	CCDC136	Q96JN2	1154 aa		13.58	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.58	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	UBA5	Q9GZZ9	404 aa		13.58	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	KAT14	Q9H8E8	782 aa		13.58	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	STARD7	Q9NQZ5	370 aa		13.58	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	PDLIM7	Q9NR12	457 aa		13.58	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	ASTN1	O14525	1302 aa		13.58	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	MCM3AP	O60318	1980 aa		13.58	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	LAMA4	Q16363	1823 aa		13.57	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	PTPDC1	A2A3K4	754 aa		13.57	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	TRIM43B	A6NCK2	446 aa		13.57	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	MOXD2P	A6NHM9	499 aa		13.57	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	PQBP1	O60828	265 aa	Known RBP	13.57	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	TNFAIP2	Q03169	654 aa		13.57	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	LRIT3	Q3SXY7	679 aa		13.57	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	GPATCH4	Q5T3I0	446 aa	Known RBP	13.57	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.57	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	NOL8	Q76FK4	1167 aa	Known RBP	13.57	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	RUFY2	Q8WXA3	655 aa		13.57	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	BAD	Q92934	168 aa		13.57	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	VTI1A	Q96AJ9	217 aa		13.57	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.57	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	KRT23	Q9C075	422 aa		13.57	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	CPVL	Q9H3G5	476 aa		13.57	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	ASGR1	P07306	291 aa		13.56	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	CLTB	P09497	229 aa		13.56	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	CHML	P26374	656 aa		13.56	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	CALML3	P27482	149 aa		13.56	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	CST5	P28325	142 aa	Predicted RBP	13.56	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	GNAS	Q5JWF2	1037 aa		13.56	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	ERICH6B	Q5W0A0	696 aa		13.56	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	FBXO16	Q8IX29	292 aa	Predicted RBP	13.56	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	ENAH	Q8N8S7	591 aa	Predicted RBP	13.56	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	PCSK9	Q8NBP7	692 aa	Known RBP	13.56	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	CLEC4D	Q8WXI8	215 aa		13.56	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	ANKS1A	Q92625	1134 aa		13.56	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	GLT1D1	Q96MS3	346 aa		13.56	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	UPF3A	Q9H1J1	476 aa	Known RBP	13.56	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	RNF39	Q9H2S5	420 aa		13.56	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	CNNM2	Q9H8M5	875 aa		13.56	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	PDGFC	Q9NRA1	345 aa		13.56	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	TNKS	O95271	1327 aa		13.56	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	ALDH5A1	P51649	535 aa	Predicted RBP	13.55	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	BEX3	Q00994	111 aa		13.55	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	PTH1R	Q03431	593 aa		13.55	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	USH1G	Q495M9	461 aa		13.55	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	TAPT1	Q6NXT6	567 aa		13.55	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	SLC30A10	Q6XR72	485 aa		13.55	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	RNF207	Q6ZRF8	634 aa		13.55	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	UBAC1	Q9BSL1	405 aa		13.55	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	TMEM39A	Q9NV64	488 aa		13.55	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	ADD3	Q9UEY8	706 aa	Known RBP	13.55	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	PNMA2	Q9UL42	364 aa		13.55	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	RAD50	Q92878	1312 aa		13.55	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	DCDC2C	A8MYV0	355 aa		13.54	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	DYNC1LI2	O43237	492 aa	Predicted RBP	13.54	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	SMPD1	P17405	629 aa		13.54	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	PTGS1	P23219	599 aa		13.54	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	ITGB8	P26012	769 aa		13.54	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	RPS6	P62753	249 aa	Known RBP	13.54	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	FAAP100	Q0VG06	881 aa		13.54	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	ASPRV1	Q53RT3	343 aa		13.54	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	TMEM63B	Q5T3F8	832 aa		13.54	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	IFIT1B	Q5T764	474 aa	Known RBP	13.54	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	IQSEC1	Q6DN90	963 aa		13.54	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	KIAA1211	Q6ZU35	1233 aa		13.54	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	CYB5R4	Q7L1T6	521 aa		13.54	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	TLK2	Q86UE8	772 aa		13.54	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	ADGRF4	Q8IZF3	695 aa		13.54	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	MORC4	Q8TE76	937 aa		13.54	□□□□□ -0.24
SOX2-OT-233	ENST00000600778	AP5M1	Q9H0R1	490 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms