RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-227ENST00000600026 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.41■■□□□ 1.66
LTBP4-227ENST00000600026 ALAS1P13196 640 aa25.4■■□□□ 1.66
LTBP4-227ENST00000600026 ARHGEF6Q15052 776 aa25.4■■□□□ 1.66
LTBP4-227ENST00000600026 PLEKHH3Q7Z736 793 aa25.4■■□□□ 1.66
LTBP4-227ENST00000600026 CCDC82Q8N4S0 544 aa25.4■■□□□ 1.66
LTBP4-227ENST00000600026 LLPHQ9BRT6 129 aaKnown RBP25.4■■□□□ 1.66
LTBP4-227ENST00000600026 ZBTB5O15062 677 aa25.39■■□□□ 1.66
LTBP4-227ENST00000600026 IFNAR1P17181 557 aa25.39■■□□□ 1.66
LTBP4-227ENST00000600026 ST3GAL1Q11201 340 aa25.39■■□□□ 1.66
LTBP4-227ENST00000600026 CTU1Q7Z7A3 348 aaKnown RBP25.39■■□□□ 1.66
LTBP4-227ENST00000600026 PIBF1Q8WXW3 757 aa25.39■■□□□ 1.66
LTBP4-227ENST00000600026 COA7Q96BR5 231 aa25.39■■□□□ 1.66
LTBP4-227ENST00000600026 INTS4Q96HW7 963 aaKnown RBP25.39■■□□□ 1.66
LTBP4-227ENST00000600026 HOMER2Q9NSB8 354 aa25.39■■□□□ 1.66
LTBP4-227ENST00000600026 RNF146Q9NTX7 359 aa25.39■■□□□ 1.66
LTBP4-227ENST00000600026 PLXNA1Q9UIW2 1896 aa25.38■■□□□ 1.65
LTBP4-227ENST00000600026 GNRH1P01148 92 aa25.38■■□□□ 1.65
LTBP4-227ENST00000600026 FUT2Q10981 343 aa25.38■■□□□ 1.65
LTBP4-227ENST00000600026 TKFCQ3LXA3 575 aa25.38■■□□□ 1.65
LTBP4-227ENST00000600026 USH1GQ495M9 461 aa25.38■■□□□ 1.65
LTBP4-227ENST00000600026 CHST13Q8NET6 341 aa25.38■■□□□ 1.65
LTBP4-227ENST00000600026 RRP36Q96EU6 259 aaKnown RBP25.38■■□□□ 1.65
LTBP4-227ENST00000600026 PNMA2Q9UL42 364 aa25.38■■□□□ 1.65
LTBP4-227ENST00000600026 PPP1R11O60927 126 aaPredicted RBP25.37■■□□□ 1.65
LTBP4-227ENST00000600026 PTPREP23469 700 aa25.37■■□□□ 1.65
LTBP4-227ENST00000600026 PRKCZQ05513 592 aa25.37■■□□□ 1.65
LTBP4-227ENST00000600026 SSRP1Q08945 709 aaKnown RBP25.37■■□□□ 1.65
LTBP4-227ENST00000600026 NTRK3Q16288 839 aa25.37■■□□□ 1.65
LTBP4-227ENST00000600026 FBXO11Q86XK2 927 aa25.37■■□□□ 1.65
LTBP4-227ENST00000600026 TRIM22Q8IYM9 498 aa25.37■■□□□ 1.65
LTBP4-227ENST00000600026 TRERF1Q96PN7 1200 aa25.37■■□□□ 1.65
LTBP4-227ENST00000600026 AMNQ9BXJ7 453 aa25.37■■□□□ 1.65
LTBP4-227ENST00000600026 ACAD9Q9H845 621 aa25.37■■□□□ 1.65
LTBP4-227ENST00000600026 SRRDQ9UH36 339 aa25.37■■□□□ 1.65
LTBP4-227ENST00000600026 GABRQQ9UN88 632 aa25.37■■□□□ 1.65
LTBP4-227ENST00000600026 IVNS1ABPQ9Y6Y0 642 aa25.37■■□□□ 1.65
LTBP4-227ENST00000600026 PNMA6FA0A0J9YX94 578 aa25.36■■□□□ 1.65
LTBP4-227ENST00000600026 HOXD10P28358 340 aa25.36■■□□□ 1.65
LTBP4-227ENST00000600026 AKAP17AQ02040 695 aaKnown RBP25.36■■□□□ 1.65
LTBP4-227ENST00000600026 GRB14Q14449 540 aa25.36■■□□□ 1.65
LTBP4-227ENST00000600026 MUM1L1Q5H9M0 696 aa25.36■■□□□ 1.65
LTBP4-227ENST00000600026 NSUN7Q8NE18 718 aaKnown RBP25.36■■□□□ 1.65
LTBP4-227ENST00000600026 SOCS4Q8WXH5 440 aa25.36■■□□□ 1.65
LTBP4-227ENST00000600026 MMP19Q99542 508 aa25.36■■□□□ 1.65
LTBP4-227ENST00000600026 PCDH10Q9P2E7 1040 aa25.36■■□□□ 1.65
LTBP4-227ENST00000600026 SEC63Q9UGP8 760 aaKnown RBP25.36■■□□□ 1.65
LTBP4-227ENST00000600026 FBXO40Q9UH90 709 aa25.36■■□□□ 1.65
LTBP4-227ENST00000600026 SMC3Q9UQE7 1217 aa25.36■■□□□ 1.65
LTBP4-227ENST00000600026 ABCB11O95342 1321 aa25.36■■□□□ 1.65
LTBP4-227ENST00000600026 LCTP09848 1927 aa25.35■■□□□ 1.65
LTBP4-227ENST00000600026 hCG_1642624A0A1W2PR95 340 aa25.35■■□□□ 1.65
LTBP4-227ENST00000600026 HMGN5P82970 282 aaKnown RBP25.35■■□□□ 1.65
LTBP4-227ENST00000600026 MORN1Q5T089 497 aa25.35■■□□□ 1.65
LTBP4-227ENST00000600026 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.35■■□□□ 1.651e-8■■■■■ 35.7
LTBP4-227ENST00000600026 IPO9Q96P70 1041 aaKnown RBP25.35■■□□□ 1.65
LTBP4-227ENST00000600026 RBM27Q9P2N5 1060 aaKnown RBP25.35■■□□□ 1.65
LTBP4-227ENST00000600026 GJD2Q9UKL4 321 aa25.35■■□□□ 1.65
LTBP4-227ENST00000600026 PTPDC1A2A3K4 754 aa25.34■■□□□ 1.65
LTBP4-227ENST00000600026 SLC15A5A6NIM6 579 aa25.34■■□□□ 1.65
LTBP4-227ENST00000600026 STRNO43815 780 aa25.34■■□□□ 1.65
LTBP4-227ENST00000600026 CTDNEP1O95476 244 aa25.34■■□□□ 1.65
LTBP4-227ENST00000600026 FCER1AP12319 257 aa25.34■■□□□ 1.65
LTBP4-227ENST00000600026 PRMT2P55345 433 aa25.34■■□□□ 1.65
LTBP4-227ENST00000600026 ABRAQ8N0Z2 381 aa25.34■■□□□ 1.65
LTBP4-227ENST00000600026 NUDT12Q9BQG2 462 aa25.34■■□□□ 1.65
LTBP4-227ENST00000600026 SLC26A6Q9BXS9 759 aa25.34■■□□□ 1.65
LTBP4-227ENST00000600026 RNF26Q9BY78 433 aaPredicted RBP25.34■■□□□ 1.65
LTBP4-227ENST00000600026 FOXD4L1Q9NU39 408 aa25.34■■□□□ 1.65
LTBP4-227ENST00000600026 PRPF3O43395 683 aaKnown RBP25.33■■□□□ 1.65
LTBP4-227ENST00000600026 ADORA2AP29274 412 aa25.33■■□□□ 1.65
LTBP4-227ENST00000600026 FLT3LGP49771 235 aa25.33■■□□□ 1.65
LTBP4-227ENST00000600026 KCTD2Q14681 263 aa25.33■■□□□ 1.65
LTBP4-227ENST00000600026 SPRYD3Q8NCJ5 442 aa25.33■■□□□ 1.65
LTBP4-227ENST00000600026 SMARCC2Q8TAQ2 1214 aa25.33■■□□□ 1.65
LTBP4-227ENST00000600026 USP6NLQ92738 828 aa25.33■■□□□ 1.65
LTBP4-227ENST00000600026 PHKBQ93100 1093 aa25.33■■□□□ 1.65
LTBP4-227ENST00000600026 KIF3AQ9Y496 699 aa25.33■■□□□ 1.65
LTBP4-227ENST00000600026 STK36Q9NRP7 1315 aa25.33■■□□□ 1.64
LTBP4-227ENST00000600026 NFIBO00712 420 aa25.32■■□□□ 1.64
LTBP4-227ENST00000600026 MAP2K5Q13163 448 aa25.32■■□□□ 1.64
LTBP4-227ENST00000600026 CLEC4DQ8WXI8 215 aa25.32■■□□□ 1.64
LTBP4-227ENST00000600026 ORC3Q9UBD5 711 aaPredicted RBP25.32■■□□□ 1.64
LTBP4-227ENST00000600026 PTPN22Q9Y2R2 807 aa25.32■■□□□ 1.64
LTBP4-227ENST00000600026 PCDHA1Q9Y5I3 950 aa25.32■■□□□ 1.64
LTBP4-227ENST00000600026 V9GY48 417 aaPredicted RBP25.32■■□□□ 1.64
LTBP4-227ENST00000600026 JAK2O60674 1132 aa25.31■■□□□ 1.64
LTBP4-227ENST00000600026 RGS2P41220 211 aa25.31■■□□□ 1.64
LTBP4-227ENST00000600026 TRAF1Q13077 416 aa25.31■■□□□ 1.64
LTBP4-227ENST00000600026 ANKRD35Q8N283 1001 aa25.31■■□□□ 1.64
LTBP4-227ENST00000600026 FAM184AQ8NB25 1140 aa25.31■■□□□ 1.64
LTBP4-227ENST00000600026 WASF1Q92558 559 aa25.31■■□□□ 1.64
LTBP4-227ENST00000600026 DDX11Q96FC9 970 aa25.31■■□□□ 1.64
LTBP4-227ENST00000600026 A1CFQ9NQ94 594 aaKnown RBP25.31■■□□□ 1.64
LTBP4-227ENST00000600026 MRPL11Q9Y3B7 192 aaKnown RBP25.31■■□□□ 1.64
LTBP4-227ENST00000600026 PTCH2Q9Y6C5 1203 aa25.31■■□□□ 1.64
LTBP4-227ENST00000600026 PPFIA3O75145 1194 aa25.3■■□□□ 1.64
LTBP4-227ENST00000600026 DEXIO95424 95 aa25.3■■□□□ 1.64
LTBP4-227ENST00000600026 CYP2B6P20813 491 aa25.3■■□□□ 1.64
LTBP4-227ENST00000600026 GJB2P29033 226 aa25.3■■□□□ 1.64
LTBP4-227ENST00000600026 IRF5Q13568 498 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms