RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 CCDC174Q6PII3 467 aa20.57■□□□□ 0.88
USHBP1-209ENST00000598570 CATIPQ7Z7H3 387 aa20.57■□□□□ 0.88
USHBP1-209ENST00000598570 ANKLE1Q8NAG6 615 aa20.57■□□□□ 0.88
USHBP1-209ENST00000598570 CPVLQ9H3G5 476 aa20.57■□□□□ 0.88
USHBP1-209ENST00000598570 LCTP09848 1927 aa20.57■□□□□ 0.88
USHBP1-209ENST00000598570 CYTH3O43739 400 aa20.56■□□□□ 0.88
USHBP1-209ENST00000598570 SNAI1O95863 264 aaPredicted RBP20.56■□□□□ 0.88
USHBP1-209ENST00000598570 ALAS1P13196 640 aa20.56■□□□□ 0.88
USHBP1-209ENST00000598570 CCND3P30281 292 aaPredicted RBP20.56■□□□□ 0.88
USHBP1-209ENST00000598570 MLLT1Q03111 559 aaPredicted RBP20.56■□□□□ 0.88
USHBP1-209ENST00000598570 ZNF654Q8IZM8 581 aa20.56■□□□□ 0.88
USHBP1-209ENST00000598570 ANKRD35Q8N283 1001 aa20.56■□□□□ 0.88
USHBP1-209ENST00000598570 DDX11Q96FC9 970 aa20.56■□□□□ 0.88
USHBP1-209ENST00000598570 DEFB118Q96PH6 123 aa20.56■□□□□ 0.88
USHBP1-209ENST00000598570 ASTN1O14525 1302 aa20.55■□□□□ 0.88
USHBP1-209ENST00000598570 SOWAHBA6NEL2 793 aa20.55■□□□□ 0.88
USHBP1-209ENST00000598570 RCAN1P53805 252 aa20.55■□□□□ 0.88
USHBP1-209ENST00000598570 CDC37Q16543 378 aaPredicted RBP20.55■□□□□ 0.88
USHBP1-209ENST00000598570 SPZ1Q9BXG8 430 aa20.55■□□□□ 0.88
USHBP1-209ENST00000598570 TM6SF1Q9BZW5 370 aa20.55■□□□□ 0.88
USHBP1-209ENST00000598570 KATNBL1Q9H079 304 aa20.55■□□□□ 0.88
USHBP1-209ENST00000598570 ISY1Q9ULR0 285 aaKnown RBP20.55■□□□□ 0.88
USHBP1-209ENST00000598570 BAZ2BQ9UIF8 2168 aaKnown RBP20.55■□□□□ 0.88
USHBP1-209ENST00000598570 MSCO60682 206 aa20.54■□□□□ 0.88
USHBP1-209ENST00000598570 MYCP01106 439 aaPredicted RBP20.54■□□□□ 0.88
USHBP1-209ENST00000598570 ZNF865P0CJ78 1059 aaPredicted RBP20.54■□□□□ 0.88
USHBP1-209ENST00000598570 CALM1P0DP23 149 aa20.54■□□□□ 0.88
USHBP1-209ENST00000598570 CALM2P0DP24 149 aa20.54■□□□□ 0.88
USHBP1-209ENST00000598570 CALM3P0DP25 149 aa20.54■□□□□ 0.88
USHBP1-209ENST00000598570 EVCP57679 992 aa20.54■□□□□ 0.88
USHBP1-209ENST00000598570 QRICH1Q2TAL8 776 aa20.54■□□□□ 0.88
USHBP1-209ENST00000598570 LZTS2Q9BRK4 669 aa20.54■□□□□ 0.88
USHBP1-209ENST00000598570 ABCB11O95342 1321 aa20.53■□□□□ 0.88
USHBP1-209ENST00000598570 MYH6P13533 1939 aa20.53■□□□□ 0.88
USHBP1-209ENST00000598570 NFIBO00712 420 aa20.53■□□□□ 0.88
USHBP1-209ENST00000598570 ZBTB5O15062 677 aa20.53■□□□□ 0.88
USHBP1-209ENST00000598570 SEPT4O43236 478 aa20.53■□□□□ 0.88
USHBP1-209ENST00000598570 PPP1R11O60927 126 aaPredicted RBP20.53■□□□□ 0.88
USHBP1-209ENST00000598570 CNTN2Q02246 1040 aa20.53■□□□□ 0.88
USHBP1-209ENST00000598570 SAMD3Q8N6K7 520 aa20.53■□□□□ 0.88
USHBP1-209ENST00000598570 ZSWIM6Q9HCJ5 1215 aa20.53■□□□□ 0.88
USHBP1-209ENST00000598570 HOMER2Q9NSB8 354 aa20.53■□□□□ 0.88
USHBP1-209ENST00000598570 FRMPD3Q5JV73 1810 aa20.53■□□□□ 0.88
USHBP1-209ENST00000598570 POTEB2H3BUK9 544 aa20.52■□□□□ 0.88
USHBP1-209ENST00000598570 OPLAHO14841 1288 aa20.52■□□□□ 0.88
USHBP1-209ENST00000598570 KIF5BP33176 963 aa20.52■□□□□ 0.88
USHBP1-209ENST00000598570 GNAQP50148 359 aa20.52■□□□□ 0.88
USHBP1-209ENST00000598570 FANCBQ8NB91 859 aa20.52■□□□□ 0.88
USHBP1-209ENST00000598570 DDX20Q9UHI6 824 aaKnown RBP20.52■□□□□ 0.88
USHBP1-209ENST00000598570 MCM3APO60318 1980 aa20.52■□□□□ 0.87
USHBP1-209ENST00000598570 PNMA6FA0A0J9YX94 578 aa20.51■□□□□ 0.87
USHBP1-209ENST00000598570 NKX3-2P78367 333 aa20.51■□□□□ 0.87
USHBP1-209ENST00000598570 FUT2Q10981 343 aa20.51■□□□□ 0.87
USHBP1-209ENST00000598570 BAATQ14032 418 aaPredicted RBP20.51■□□□□ 0.87
USHBP1-209ENST00000598570 APOA5Q6Q788 366 aa20.51■□□□□ 0.87
USHBP1-209ENST00000598570 FBXO11Q86XK2 927 aa20.51■□□□□ 0.87
USHBP1-209ENST00000598570 AMNQ9BXJ7 453 aa20.51■□□□□ 0.87
USHBP1-209ENST00000598570 MAP3K20Q9NYL2 800 aaKnown RBP20.51■□□□□ 0.87
USHBP1-209ENST00000598570 BRPF3Q9ULD4 1205 aa20.51■□□□□ 0.87
USHBP1-209ENST00000598570 NID2Q14112 1375 aa20.5■□□□□ 0.87
USHBP1-209ENST00000598570 CCDC69A6NI79 296 aa20.5■□□□□ 0.87
USHBP1-209ENST00000598570 EIF5BO60841 1220 aaKnown RBP20.5■□□□□ 0.87
USHBP1-209ENST00000598570 TFRCP02786 760 aaKnown RBP20.5■□□□□ 0.87
USHBP1-209ENST00000598570 COL6A1P12109 1028 aa20.5■□□□□ 0.87
USHBP1-209ENST00000598570 TAL1P17542 331 aaPredicted RBP20.5■□□□□ 0.87
USHBP1-209ENST00000598570 RPS6KB1P23443 525 aa20.5■□□□□ 0.87
USHBP1-209ENST00000598570 EDNRBP24530 442 aa20.5■□□□□ 0.87
USHBP1-209ENST00000598570 PSMA5P28066 241 aa20.5■□□□□ 0.87
USHBP1-209ENST00000598570 SLC4A3P48751 1232 aa20.5■□□□□ 0.87
USHBP1-209ENST00000598570 TRAF1Q13077 416 aa20.5■□□□□ 0.87
USHBP1-209ENST00000598570 PRAMEF19Q5SWL8 479 aa20.5■□□□□ 0.87
USHBP1-209ENST00000598570 SRBD1Q8N5C6 995 aaKnown RBP20.5■□□□□ 0.87
USHBP1-209ENST00000598570 LRRC2Q9BYS8 371 aa20.5■□□□□ 0.87
USHBP1-209ENST00000598570 ABHD16BQ9H3Z7 469 aa20.5■□□□□ 0.87
USHBP1-209ENST00000598570 FAM217BQ9NTX9 383 aaPredicted RBP20.5■□□□□ 0.87
USHBP1-209ENST00000598570 SLC12A7Q9Y666 1083 aa20.5■□□□□ 0.87
USHBP1-209ENST00000598570 ASB14A6NK59 587 aa20.49■□□□□ 0.87
USHBP1-209ENST00000598570 RPS6P62753 249 aaKnown RBP20.49■□□□□ 0.87
USHBP1-209ENST00000598570 PPP2R5BQ15173 497 aa20.49■□□□□ 0.87
USHBP1-209ENST00000598570 CCDC144CPQ8IYA2 1237 aa20.49■□□□□ 0.87
USHBP1-209ENST00000598570 DNERQ8NFT8 737 aa20.49■□□□□ 0.87
USHBP1-209ENST00000598570 CTCFLQ8NI51 663 aaPredicted RBP20.49■□□□□ 0.87
USHBP1-209ENST00000598570 JAKMIP1Q96N16 626 aaKnown RBP20.49■□□□□ 0.87
USHBP1-209ENST00000598570 MYL10Q9BUA6 226 aa20.49■□□□□ 0.87
USHBP1-209ENST00000598570 VAT1LQ9HCJ6 419 aa20.49■□□□□ 0.87
USHBP1-209ENST00000598570 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.49■□□□□ 0.87
USHBP1-209ENST00000598570 MRPL11Q9Y3B7 192 aaKnown RBP20.49■□□□□ 0.87
USHBP1-209ENST00000598570 HSD17B4P51659 736 aa20.48■□□□□ 0.87
USHBP1-209ENST00000598570 ANAPC15P60006 121 aa20.48■□□□□ 0.87
USHBP1-209ENST00000598570 BLOC1S2Q6QNY1 142 aa20.48■□□□□ 0.87
USHBP1-209ENST00000598570 RNF207Q6ZRF8 634 aa20.48■□□□□ 0.87
USHBP1-209ENST00000598570 TMTC3Q6ZXV5 915 aa20.48■□□□□ 0.87
USHBP1-209ENST00000598570 ARMCX2Q7L311 632 aa20.48■□□□□ 0.87
USHBP1-209ENST00000598570 TBC1D5Q92609 795 aa20.48■□□□□ 0.87
USHBP1-209ENST00000598570 PIGSQ96S52 555 aa20.48■□□□□ 0.87
USHBP1-209ENST00000598570 ALDH8A1Q9H2A2 487 aaPredicted RBP20.48■□□□□ 0.87
USHBP1-209ENST00000598570 RBM47A0AV96 593 aaKnown RBP20.47■□□□□ 0.87
USHBP1-209ENST00000598570 ACVR2BQ13705 512 aa20.47■□□□□ 0.87
USHBP1-209ENST00000598570 NSMFQ6X4W1 530 aa20.47■□□□□ 0.87
USHBP1-209ENST00000598570 SLC30A10Q6XR72 485 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms