RNA–Protein interactions for RNA: ENST00000598502.5

TRPM4-209, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best)

Gene TRPM4, Length 3,695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-209ENST00000598502 DIXDC1Q155Q3 683 aa17.32■□□□□ 0.36
TRPM4-209ENST00000598502 IQCEQ6IPM2 695 aa17.32■□□□□ 0.36
TRPM4-209ENST00000598502 NSUN4Q96CB9 384 aaKnown RBP17.32■□□□□ 0.36
TRPM4-209ENST00000598502 SMARCAL1Q9NZC9 954 aa17.32■□□□□ 0.36
TRPM4-209ENST00000598502 SAP30BPQ9UHR5 308 aaKnown RBP17.32■□□□□ 0.36
TRPM4-209ENST00000598502 CEP131Q9UPN4 1083 aa17.32■□□□□ 0.36
TRPM4-209ENST00000598502 COL4A1P02462 1669 aa17.32■□□□□ 0.36
TRPM4-209ENST00000598502 NDUFA10O95299 355 aa17.32■□□□□ 0.36
TRPM4-209ENST00000598502 CHRM1P11229 460 aaPredicted RBP17.32■□□□□ 0.36
TRPM4-209ENST00000598502 GUCY2FP51841 1108 aa17.32■□□□□ 0.36
TRPM4-209ENST00000598502 SF3B3Q15393 1217 aaKnown RBP17.32■□□□□ 0.36
TRPM4-209ENST00000598502 EZH2Q15910 746 aaKnown RBP17.32■□□□□ 0.36
TRPM4-209ENST00000598502 LRCH2Q5VUJ6 765 aa17.32■□□□□ 0.36
TRPM4-209ENST00000598502 KCNV1Q6PIU1 500 aa17.32■□□□□ 0.36
TRPM4-209ENST00000598502 TPTE2Q6XPS3 522 aa17.32■□□□□ 0.36
TRPM4-209ENST00000598502 VEZTQ9HBM0 779 aa17.32■□□□□ 0.36
TRPM4-209ENST00000598502 ABHD10Q9NUJ1 306 aa17.32■□□□□ 0.36
TRPM4-209ENST00000598502 NHSL1Q5SYE7 1610 aa17.31■□□□□ 0.36
TRPM4-209ENST00000598502 E7EVH7 732 aa17.31■□□□□ 0.36
TRPM4-209ENST00000598502 SWT1Q5T5J6 900 aaKnown RBP17.31■□□□□ 0.36
TRPM4-209ENST00000598502 KANK3Q6NY19 840 aa17.31■□□□□ 0.36
TRPM4-209ENST00000598502 AMIGO3Q86WK7 504 aa17.31■□□□□ 0.36
TRPM4-209ENST00000598502 ARL8AQ96BM9 186 aa17.31■□□□□ 0.36
TRPM4-209ENST00000598502 DCP1AQ9NPI6 582 aaPredicted RBP17.31■□□□□ 0.36
TRPM4-209ENST00000598502 COL14A1Q05707 1796 aaKnown RBP17.31■□□□□ 0.36
TRPM4-209ENST00000598502 COL1A1P02452 1464 aaPredicted RBP17.31■□□□□ 0.36
TRPM4-209ENST00000598502 EIF3HO15372 352 aaKnown RBP eCLIP17.31■□□□□ 0.36
TRPM4-209ENST00000598502 GUCY1A3Q02108 690 aa17.31■□□□□ 0.36
TRPM4-209ENST00000598502 NEDD9Q14511 834 aa17.31■□□□□ 0.36
TRPM4-209ENST00000598502 RASGRP4Q8TDF6 673 aa17.31■□□□□ 0.36
TRPM4-209ENST00000598502 GPKOWQ92917 476 aaPredicted RBP eCLIP17.31■□□□□ 0.362e-6■■□□□ 12.1
TRPM4-209ENST00000598502 RNF26Q9BY78 433 aaPredicted RBP17.31■□□□□ 0.36
TRPM4-209ENST00000598502 MYH2Q9UKX2 1941 aa17.31■□□□□ 0.36
TRPM4-209ENST00000598502 ZNF622Q969S3 477 aaKnown RBP eCLIP17.31■□□□□ 0.36
TRPM4-209ENST00000598502 RTCBQ9Y3I0 505 aaKnown RBP17.31■□□□□ 0.36
TRPM4-209ENST00000598502 ROBO1Q9Y6N7 1651 aa17.3■□□□□ 0.36
TRPM4-209ENST00000598502 BACH1O14867 736 aa17.3■□□□□ 0.36
TRPM4-209ENST00000598502 SEC24CP53992 1094 aa17.3■□□□□ 0.36
TRPM4-209ENST00000598502 MORC3Q14149 939 aa17.3■□□□□ 0.36
TRPM4-209ENST00000598502 KRT31Q15323 416 aa17.3■□□□□ 0.36
TRPM4-209ENST00000598502 PKN1Q16512 942 aa17.3■□□□□ 0.36
TRPM4-209ENST00000598502 CFAP58Q5T655 872 aa17.3■□□□□ 0.36
TRPM4-209ENST00000598502 ANKRD13CQ8N6S4 541 aa17.3■□□□□ 0.36
TRPM4-209ENST00000598502 SYMPKQ92797 1274 aaKnown RBP17.3■□□□□ 0.36
TRPM4-209ENST00000598502 MKNK2Q9HBH9 465 aa17.3■□□□□ 0.36
TRPM4-209ENST00000598502 ZNF804BA4D1E1 1349 aa17.3■□□□□ 0.36
TRPM4-209ENST00000598502 PRPF6O94906 941 aaKnown RBP17.3■□□□□ 0.36
TRPM4-209ENST00000598502 CD44P16070 742 aaKnown RBP17.3■□□□□ 0.36
TRPM4-209ENST00000598502 SF3B2Q13435 895 aaKnown RBP17.3■□□□□ 0.36
TRPM4-209ENST00000598502 CCDC121Q6ZUS5 278 aa17.3■□□□□ 0.36
TRPM4-209ENST00000598502 SRBD1Q8N5C6 995 aaKnown RBP17.3■□□□□ 0.36
TRPM4-209ENST00000598502 MAGEC2Q9UBF1 373 aaPredicted RBP17.3■□□□□ 0.36
TRPM4-209ENST00000598502 ADD3Q9UEY8 706 aaKnown RBP17.3■□□□□ 0.36
TRPM4-209ENST00000598502 STX8Q9UNK0 236 aa17.3■□□□□ 0.36
TRPM4-209ENST00000598502 BAZ2AQ9UIF9 1905 aaKnown RBP17.3■□□□□ 0.36
TRPM4-209ENST00000598502 ANKRD36CQ5JPF3 1778 aa17.3■□□□□ 0.36
TRPM4-209ENST00000598502 RNF225M0QZC1 329 aaPredicted RBP17.29■□□□□ 0.36
TRPM4-209ENST00000598502 WDR93Q6P2C0 686 aa17.29■□□□□ 0.36
TRPM4-209ENST00000598502 SLC44A5Q8NCS7 719 aa17.29■□□□□ 0.36
TRPM4-209ENST00000598502 KRT14P02533 472 aa17.29■□□□□ 0.36
TRPM4-209ENST00000598502 ERCC3P19447 782 aa17.29■□□□□ 0.36
TRPM4-209ENST00000598502 TFAP4Q01664 338 aa17.29■□□□□ 0.36
TRPM4-209ENST00000598502 CCNI2Q6ZMN8 369 aaPredicted RBP17.29■□□□□ 0.36
TRPM4-209ENST00000598502 PLIN2Q99541 437 aa17.29■□□□□ 0.36
TRPM4-209ENST00000598502 SRPRBQ9Y5M8 271 aaKnown RBP17.29■□□□□ 0.36
TRPM4-209ENST00000598502 RFC4P35249 363 aa17.29■□□□□ 0.36
TRPM4-209ENST00000598502 TROAPQ12815 778 aa17.29■□□□□ 0.36
TRPM4-209ENST00000598502 KIF5AQ12840 1032 aa17.29■□□□□ 0.36
TRPM4-209ENST00000598502 PTGDRQ13258 359 aa17.29■□□□□ 0.36
TRPM4-209ENST00000598502 SPA17Q15506 151 aa17.29■□□□□ 0.36
TRPM4-209ENST00000598502 SMCR8Q8TEV9 937 aaPredicted RBP17.29■□□□□ 0.36
TRPM4-209ENST00000598502 HDAC7Q8WUI4 952 aa17.29■□□□□ 0.36
TRPM4-209ENST00000598502 VIPAS39Q9H9C1 493 aa17.29■□□□□ 0.36
TRPM4-209ENST00000598502 C4AP0C0L4 1744 aa17.29■□□□□ 0.36
TRPM4-209ENST00000598502 C4BP0C0L5 1744 aa17.29■□□□□ 0.36
TRPM4-209ENST00000598502 A0A087X0B3 334 aa17.28■□□□□ 0.36
TRPM4-209ENST00000598502 NNTQ13423 1086 aa17.28■□□□□ 0.36
TRPM4-209ENST00000598502 HLTFQ14527 1009 aaKnown RBP eCLIP17.28■□□□□ 0.36
TRPM4-209ENST00000598502 TTC38Q5R3I4 469 aa17.28■□□□□ 0.36
TRPM4-209ENST00000598502 MED15Q96RN5 788 aa17.28■□□□□ 0.36
TRPM4-209ENST00000598502 CPVLQ9H3G5 476 aa17.28■□□□□ 0.36
TRPM4-209ENST00000598502 DUSP10Q9Y6W6 482 aa17.28■□□□□ 0.36
TRPM4-209ENST00000598502 ERCC5P28715 1186 aaPredicted RBP17.28■□□□□ 0.36
TRPM4-209ENST00000598502 COPB1P53618 953 aaKnown RBP17.28■□□□□ 0.36
TRPM4-209ENST00000598502 APBA1Q02410 837 aa17.28■□□□□ 0.36
TRPM4-209ENST00000598502 ENOX2Q16206 610 aaKnown RBP17.28■□□□□ 0.36
TRPM4-209ENST00000598502 FBXO33Q7Z6M2 555 aa17.28■□□□□ 0.36
TRPM4-209ENST00000598502 OR8K1Q8NGG5 319 aa17.28■□□□□ 0.36
TRPM4-209ENST00000598502 TBC1D31Q96DN5 1066 aa17.28■□□□□ 0.36
TRPM4-209ENST00000598502 GOLGA6L10A6NI86 522 aa17.28■□□□□ 0.36
TRPM4-209ENST00000598502 ADAMTS3O15072 1205 aa17.28■□□□□ 0.36
TRPM4-209ENST00000598502 CPP00450 1065 aa17.28■□□□□ 0.36
TRPM4-209ENST00000598502 PEX19P40855 299 aa17.28■□□□□ 0.36
TRPM4-209ENST00000598502 PAFAH1B1P43034 410 aa17.28■□□□□ 0.36
TRPM4-209ENST00000598502 ARHGEF1Q92888 912 aaKnown RBP17.28■□□□□ 0.36
TRPM4-209ENST00000598502 LRRC1Q9BTT6 524 aa17.28■□□□□ 0.36
TRPM4-209ENST00000598502 BRIP1Q9BX63 1249 aa17.28■□□□□ 0.36
TRPM4-209ENST00000598502 NYXQ9GZU5 481 aa17.28■□□□□ 0.36
TRPM4-209ENST00000598502 HAUS4Q9H6D7 363 aa17.28■□□□□ 0.36
TRPM4-209ENST00000598502 ESYT3A0FGR9 886 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms